data_5QGK
#
_model_server_result.job_id            Zy_hJdUhRFZ67rV3od2QDw 
_model_server_result.datetime_utc      '2024-11-16 02:39:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5qgk 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":304}' 
#
_entry.id    5QGK 
#
_exptl.entry_id    5QGK 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              225.249 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-(4-methylphenyl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5QGK 
_cell.length_a            126.78 
_cell.length_b            126.78 
_cell.length_c            41.71 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5QGK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        150 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 3 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
? 4 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ARG 87 A ARG 101 1_555 A N HYP 88 A HYP 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
covale ? covale2 A C HYP 88 A HYP 102 1_555 A N HIS 89 A HIS 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale3 A C VAL 94 A VAL 108 1_555 A N CSO 95 A CSO 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale4 A C CSO 95 A CSO 109 1_555 A N CYS 96 A CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.315 ? 
#
_chem_comp.formula           'C12 H11 N5' 
_chem_comp.formula_weight    225.249 
_chem_comp.id                H0S 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-(4-methylphenyl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C3 C4 H0S doub 158 n y 
C3 C2 H0S sing 159 n y 
C4 C5 H0S sing 160 n y 
C1 C2 H0S sing 161 n n 
C2 C7 H0S doub 162 n y 
C5 N1 H0S sing 163 n n 
C5 C6 H0S doub 164 n y 
C10 N2 H0S doub 165 n y 
C10 C9 H0S sing 166 n y 
N1 C8 H0S sing 167 n n 
C7 C6 H0S sing 168 n y 
N2 N3 H0S sing 169 n y 
C9 C8 H0S doub 170 n y 
C9 C11 H0S sing 171 n y 
C8 N5 H0S sing 172 n y 
N3 C11 H0S sing 173 n y 
C11 N4 H0S doub 174 n y 
N5 C12 H0S doub 175 n y 
C12 N4 H0S sing 176 n y 
N1 H1 H0S sing 177 n n 
N3 H2 H0S sing 178 n n 
C4 H3 H0S sing 179 n n 
C6 H4 H0S sing 180 n n 
C7 H5 H0S sing 181 n n 
C10 H6 H0S sing 182 n n 
C1 H7 H0S sing 183 n n 
C1 H8 H0S sing 184 n n 
C1 H9 H0S sing 185 n n 
C3 H10 H0S sing 186 n n 
C12 H11 H0S sing 187 n n 
#
_atom_sites.entry_id                     5QGK 
_atom_sites.fract_transf_matrix[1][1]    0.007888 
_atom_sites.fract_transf_matrix[1][2]    0.004554 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009108 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.023975 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ACT A 1 301 1 ACT ACT . 
C 3 DMS A 1 302 1 DMS DMS . 
D 4 H0S A 1 303 1 H0S LIG . 
E 4 H0S A 1 304 2 H0S LIG . 
F 4 H0S A 1 305 3 H0S LIG . 
G 5 HOH A 1 401 94 HOH HOH . 
G 5 HOH A 2 402 162 HOH HOH . 
G 5 HOH A 3 403 69 HOH HOH . 
G 5 HOH A 4 404 9 HOH HOH . 
G 5 HOH A 5 405 24 HOH HOH . 
G 5 HOH A 6 406 117 HOH HOH . 
G 5 HOH A 7 407 199 HOH HOH . 
G 5 HOH A 8 408 49 HOH HOH . 
G 5 HOH A 9 409 91 HOH HOH . 
G 5 HOH A 10 410 167 HOH HOH . 
G 5 HOH A 11 411 186 HOH HOH . 
G 5 HOH A 12 412 103 HOH HOH . 
G 5 HOH A 13 413 124 HOH HOH . 
G 5 HOH A 14 414 143 HOH HOH . 
G 5 HOH A 15 415 157 HOH HOH . 
G 5 HOH A 16 416 113 HOH HOH . 
G 5 HOH A 17 417 82 HOH HOH . 
G 5 HOH A 18 418 105 HOH HOH . 
G 5 HOH A 19 419 179 HOH HOH . 
G 5 HOH A 20 420 166 HOH HOH . 
G 5 HOH A 21 421 47 HOH HOH . 
G 5 HOH A 22 422 27 HOH HOH . 
G 5 HOH A 23 423 48 HOH HOH . 
G 5 HOH A 24 424 125 HOH HOH . 
G 5 HOH A 25 425 77 HOH HOH . 
G 5 HOH A 26 426 178 HOH HOH . 
G 5 HOH A 27 427 38 HOH HOH . 
G 5 HOH A 28 428 10 HOH HOH . 
G 5 HOH A 29 429 108 HOH HOH . 
G 5 HOH A 30 430 134 HOH HOH . 
G 5 HOH A 31 431 140 HOH HOH . 
G 5 HOH A 32 432 128 HOH HOH . 
G 5 HOH A 33 433 137 HOH HOH . 
G 5 HOH A 34 434 36 HOH HOH . 
G 5 HOH A 35 435 112 HOH HOH . 
G 5 HOH A 36 436 79 HOH HOH . 
G 5 HOH A 37 437 19 HOH HOH . 
G 5 HOH A 38 438 89 HOH HOH . 
G 5 HOH A 39 439 15 HOH HOH . 
G 5 HOH A 40 440 64 HOH HOH . 
G 5 HOH A 41 441 53 HOH HOH . 
G 5 HOH A 42 442 156 HOH HOH . 
G 5 HOH A 43 443 35 HOH HOH . 
G 5 HOH A 44 444 51 HOH HOH . 
G 5 HOH A 45 445 14 HOH HOH . 
G 5 HOH A 46 446 6 HOH HOH . 
G 5 HOH A 47 447 146 HOH HOH . 
G 5 HOH A 48 448 75 HOH HOH . 
G 5 HOH A 49 449 147 HOH HOH . 
G 5 HOH A 50 450 13 HOH HOH . 
G 5 HOH A 51 451 99 HOH HOH . 
G 5 HOH A 52 452 109 HOH HOH . 
G 5 HOH A 53 453 158 HOH HOH . 
G 5 HOH A 54 454 43 HOH HOH . 
G 5 HOH A 55 455 20 HOH HOH . 
G 5 HOH A 56 456 118 HOH HOH . 
G 5 HOH A 57 457 26 HOH HOH . 
G 5 HOH A 58 458 76 HOH HOH . 
G 5 HOH A 59 459 198 HOH HOH . 
G 5 HOH A 60 460 182 HOH HOH . 
G 5 HOH A 61 461 39 HOH HOH . 
G 5 HOH A 62 462 3 HOH HOH . 
G 5 HOH A 63 463 104 HOH HOH . 
G 5 HOH A 64 464 11 HOH HOH . 
G 5 HOH A 65 465 101 HOH HOH . 
G 5 HOH A 66 466 8 HOH HOH . 
G 5 HOH A 67 467 116 HOH HOH . 
G 5 HOH A 68 468 194 HOH HOH . 
G 5 HOH A 69 469 7 HOH HOH . 
G 5 HOH A 70 470 183 HOH HOH . 
G 5 HOH A 71 471 56 HOH HOH . 
G 5 HOH A 72 472 193 HOH HOH . 
G 5 HOH A 73 473 1 HOH HOH . 
G 5 HOH A 74 474 71 HOH HOH . 
G 5 HOH A 75 475 2 HOH HOH . 
G 5 HOH A 76 476 40 HOH HOH . 
G 5 HOH A 77 477 78 HOH HOH . 
G 5 HOH A 78 478 61 HOH HOH . 
G 5 HOH A 79 479 150 HOH HOH . 
G 5 HOH A 80 480 25 HOH HOH . 
G 5 HOH A 81 481 152 HOH HOH . 
G 5 HOH A 82 482 121 HOH HOH . 
G 5 HOH A 83 483 45 HOH HOH . 
G 5 HOH A 84 484 98 HOH HOH . 
G 5 HOH A 85 485 62 HOH HOH . 
G 5 HOH A 86 486 197 HOH HOH . 
G 5 HOH A 87 487 54 HOH HOH . 
G 5 HOH A 88 488 17 HOH HOH . 
G 5 HOH A 89 489 12 HOH HOH . 
G 5 HOH A 90 490 139 HOH HOH . 
G 5 HOH A 91 491 42 HOH HOH . 
G 5 HOH A 92 492 37 HOH HOH . 
G 5 HOH A 93 493 58 HOH HOH . 
G 5 HOH A 94 494 55 HOH HOH . 
G 5 HOH A 95 495 46 HOH HOH . 
G 5 HOH A 96 496 22 HOH HOH . 
G 5 HOH A 97 497 72 HOH HOH . 
G 5 HOH A 98 498 106 HOH HOH . 
G 5 HOH A 99 499 80 HOH HOH . 
G 5 HOH A 100 500 153 HOH HOH . 
G 5 HOH A 101 501 5 HOH HOH . 
G 5 HOH A 102 502 34 HOH HOH . 
G 5 HOH A 103 503 155 HOH HOH . 
G 5 HOH A 104 504 110 HOH HOH . 
G 5 HOH A 105 505 31 HOH HOH . 
G 5 HOH A 106 506 59 HOH HOH . 
G 5 HOH A 107 507 21 HOH HOH . 
G 5 HOH A 108 508 149 HOH HOH . 
G 5 HOH A 109 509 173 HOH HOH . 
G 5 HOH A 110 510 196 HOH HOH . 
G 5 HOH A 111 511 187 HOH HOH . 
G 5 HOH A 112 512 154 HOH HOH . 
G 5 HOH A 113 513 184 HOH HOH . 
G 5 HOH A 114 514 138 HOH HOH . 
G 5 HOH A 115 515 122 HOH HOH . 
G 5 HOH A 116 516 111 HOH HOH . 
G 5 HOH A 117 517 170 HOH HOH . 
G 5 HOH A 118 518 16 HOH HOH . 
G 5 HOH A 119 519 63 HOH HOH . 
G 5 HOH A 120 520 176 HOH HOH . 
G 5 HOH A 121 521 191 HOH HOH . 
G 5 HOH A 122 522 159 HOH HOH . 
G 5 HOH A 123 523 86 HOH HOH . 
G 5 HOH A 124 524 50 HOH HOH . 
G 5 HOH A 125 525 129 HOH HOH . 
G 5 HOH A 126 526 96 HOH HOH . 
G 5 HOH A 127 527 180 HOH HOH . 
G 5 HOH A 128 528 175 HOH HOH . 
G 5 HOH A 129 529 127 HOH HOH . 
G 5 HOH A 130 530 23 HOH HOH . 
G 5 HOH A 131 531 144 HOH HOH . 
G 5 HOH A 132 532 161 HOH HOH . 
G 5 HOH A 133 533 169 HOH HOH . 
G 5 HOH A 134 534 119 HOH HOH . 
G 5 HOH A 135 535 177 HOH HOH . 
G 5 HOH A 136 536 66 HOH HOH . 
G 5 HOH A 137 537 44 HOH HOH . 
G 5 HOH A 138 538 29 HOH HOH . 
G 5 HOH A 139 539 57 HOH HOH . 
G 5 HOH A 140 540 174 HOH HOH . 
G 5 HOH A 141 541 123 HOH HOH . 
G 5 HOH A 142 542 90 HOH HOH . 
G 5 HOH A 143 543 172 HOH HOH . 
G 5 HOH A 144 544 192 HOH HOH . 
G 5 HOH A 145 545 168 HOH HOH . 
G 5 HOH A 146 546 181 HOH HOH . 
G 5 HOH A 147 547 65 HOH HOH . 
G 5 HOH A 148 548 190 HOH HOH . 
G 5 HOH A 149 549 185 HOH HOH . 
G 5 HOH A 150 550 126 HOH HOH . 
G 5 HOH A 151 551 132 HOH HOH . 
G 5 HOH A 152 552 195 HOH HOH . 
G 5 HOH A 153 553 131 HOH HOH . 
G 5 HOH A 154 554 88 HOH HOH . 
G 5 HOH A 155 555 188 HOH HOH . 
G 5 HOH A 156 556 148 HOH HOH . 
G 5 HOH A 157 557 130 HOH HOH . 
G 5 HOH A 158 558 165 HOH HOH . 
G 5 HOH A 159 559 164 HOH HOH . 
G 5 HOH A 160 560 171 HOH HOH . 
G 5 HOH A 161 561 68 HOH HOH . 
G 5 HOH A 162 562 115 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 H0S . . . E 4 33.94 -42.216 73.892 0.51 32.47 ? N1 H0S 304 A 1 
HETATM 2 N N3 H0S . . . E 4 30.757 -43.846 70.979 0.51 35.79 ? N3 H0S 304 A 1 
HETATM 3 C C4 H0S . . . E 4 36.004 -42.105 75.146 0.51 29.08 ? C4 H0S 304 A 1 
HETATM 4 C C5 H0S . . . E 4 34.606 -42.089 75.138 0.51 30.36 ? C5 H0S 304 A 1 
HETATM 5 C C6 H0S . . . E 4 33.932 -41.96 76.351 0.51 29.36 ? C6 H0S 304 A 1 
HETATM 6 C C7 H0S . . . E 4 34.649 -41.869 77.532 0.51 29.98 ? C7 H0S 304 A 1 
HETATM 7 C C8 H0S . . . E 4 32.621 -42.401 73.604 0.51 34.6 ? C8 H0S 304 A 1 
HETATM 8 C C10 H0S . . . E 4 32.876 -43.689 71.294 0.51 35.91 ? C10 H0S 304 A 1 
HETATM 9 C C1 H0S . . . E 4 36.79 -41.754 78.844 0.51 28.67 ? C1 H0S 304 A 1 
HETATM 10 C C2 H0S . . . E 4 36.035 -41.872 77.549 0.51 29.03 ? C2 H0S 304 A 1 
HETATM 11 C C3 H0S . . . E 4 36.695 -41.998 76.342 0.51 27.82 ? C3 H0S 304 A 1 
HETATM 12 C C9 H0S . . . E 4 32.259 -43.066 72.406 0.51 36.02 ? C9 H0S 304 A 1 
HETATM 13 N N2 H0S . . . E 4 31.98 -44.154 70.441 0.51 34.74 ? N2 H0S 304 A 1 
HETATM 14 C C11 H0S . . . E 4 30.88 -43.195 72.153 0.51 34.73 ? C11 H0S 304 A 1 
HETATM 15 N N4 H0S . . . E 4 29.909 -42.74 72.961 0.51 36.77 ? N4 H0S 304 A 1 
HETATM 16 C C12 H0S . . . E 4 30.376 -42.132 74.05 0.51 34.61 ? C12 H0S 304 A 1 
HETATM 17 N N5 H0S . . . E 4 31.652 -41.928 74.411 0.51 36.11 ? N5 H0S 304 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           268 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           17 
#