data_5QGS # _model_server_result.job_id F4_xTm8S9fOMDFYIEI8PuA _model_server_result.datetime_utc '2024-11-26 12:07:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5qgs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 5QGS # _exptl.entry_id 5QGS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5QGS _cell.length_a 125.83 _cell.length_b 125.83 _cell.length_c 41.53 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5QGS _symmetry.cell_setting ? _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 3 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ARG 87 A ARG 101 1_555 A N HYP 88 A HYP 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale2 A C HYP 88 A HYP 102 1_555 A N HIS 89 A HIS 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale3 A C VAL 94 A VAL 108 1_555 A N CSO 95 A CSO 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale4 A C CSO 95 A CSO 109 1_555 A N CYS 96 A CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 5QGS _atom_sites.fract_transf_matrix[1][1] 0.007947 _atom_sites.fract_transf_matrix[1][2] 0.004588 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009177 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.024079 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACT A 1 301 1 ACT ACT . C 2 ACT A 1 302 2 ACT ACT . D 3 DMS A 1 303 1 DMS DMS . E 3 DMS A 1 304 2 DMS DMS . F 4 H0D A 1 305 1 H0D LIG . G 5 HOH A 1 401 11 HOH HOH . G 5 HOH A 2 402 201 HOH HOH . G 5 HOH A 3 403 202 HOH HOH . G 5 HOH A 4 404 166 HOH HOH . G 5 HOH A 5 405 69 HOH HOH . G 5 HOH A 6 406 199 HOH HOH . G 5 HOH A 7 407 9 HOH HOH . G 5 HOH A 8 408 112 HOH HOH . G 5 HOH A 9 409 79 HOH HOH . G 5 HOH A 10 410 47 HOH HOH . G 5 HOH A 11 411 134 HOH HOH . G 5 HOH A 12 412 118 HOH HOH . G 5 HOH A 13 413 77 HOH HOH . G 5 HOH A 14 414 128 HOH HOH . G 5 HOH A 15 415 53 HOH HOH . G 5 HOH A 16 416 109 HOH HOH . G 5 HOH A 17 417 197 HOH HOH . G 5 HOH A 18 418 124 HOH HOH . G 5 HOH A 19 419 19 HOH HOH . G 5 HOH A 20 420 86 HOH HOH . G 5 HOH A 21 421 26 HOH HOH . G 5 HOH A 22 422 13 HOH HOH . G 5 HOH A 23 423 157 HOH HOH . G 5 HOH A 24 424 89 HOH HOH . G 5 HOH A 25 425 113 HOH HOH . G 5 HOH A 26 426 48 HOH HOH . G 5 HOH A 27 427 6 HOH HOH . G 5 HOH A 28 428 161 HOH HOH . G 5 HOH A 29 429 51 HOH HOH . G 5 HOH A 30 430 20 HOH HOH . G 5 HOH A 31 431 140 HOH HOH . G 5 HOH A 32 432 97 HOH HOH . G 5 HOH A 33 433 183 HOH HOH . G 5 HOH A 34 434 61 HOH HOH . G 5 HOH A 35 435 15 HOH HOH . G 5 HOH A 36 436 78 HOH HOH . G 5 HOH A 37 437 167 HOH HOH . G 5 HOH A 38 438 179 HOH HOH . G 5 HOH A 39 439 25 HOH HOH . G 5 HOH A 40 440 102 HOH HOH . G 5 HOH A 41 441 108 HOH HOH . G 5 HOH A 42 442 14 HOH HOH . G 5 HOH A 43 443 34 HOH HOH . G 5 HOH A 44 444 10 HOH HOH . G 5 HOH A 45 445 146 HOH HOH . G 5 HOH A 46 446 38 HOH HOH . G 5 HOH A 47 447 80 HOH HOH . G 5 HOH A 48 448 110 HOH HOH . G 5 HOH A 49 449 143 HOH HOH . G 5 HOH A 50 450 104 HOH HOH . G 5 HOH A 51 451 204 HOH HOH . G 5 HOH A 52 452 117 HOH HOH . G 5 HOH A 53 453 99 HOH HOH . G 5 HOH A 54 454 182 HOH HOH . G 5 HOH A 55 455 193 HOH HOH . G 5 HOH A 56 456 3 HOH HOH . G 5 HOH A 57 457 39 HOH HOH . G 5 HOH A 58 458 18 HOH HOH . G 5 HOH A 59 459 101 HOH HOH . G 5 HOH A 60 460 1 HOH HOH . G 5 HOH A 61 461 36 HOH HOH . G 5 HOH A 62 462 105 HOH HOH . G 5 HOH A 63 463 40 HOH HOH . G 5 HOH A 64 464 187 HOH HOH . G 5 HOH A 65 465 137 HOH HOH . G 5 HOH A 66 466 49 HOH HOH . G 5 HOH A 67 467 158 HOH HOH . G 5 HOH A 68 468 72 HOH HOH . G 5 HOH A 69 469 103 HOH HOH . G 5 HOH A 70 470 35 HOH HOH . G 5 HOH A 71 471 2 HOH HOH . G 5 HOH A 72 472 75 HOH HOH . G 5 HOH A 73 473 85 HOH HOH . G 5 HOH A 74 474 28 HOH HOH . G 5 HOH A 75 475 58 HOH HOH . G 5 HOH A 76 476 8 HOH HOH . G 5 HOH A 77 477 106 HOH HOH . G 5 HOH A 78 478 42 HOH HOH . G 5 HOH A 79 479 62 HOH HOH . G 5 HOH A 80 480 153 HOH HOH . G 5 HOH A 81 481 7 HOH HOH . G 5 HOH A 82 482 141 HOH HOH . G 5 HOH A 83 483 91 HOH HOH . G 5 HOH A 84 484 59 HOH HOH . G 5 HOH A 85 485 22 HOH HOH . G 5 HOH A 86 486 162 HOH HOH . G 5 HOH A 87 487 186 HOH HOH . G 5 HOH A 88 488 176 HOH HOH . G 5 HOH A 89 489 98 HOH HOH . G 5 HOH A 90 490 56 HOH HOH . G 5 HOH A 91 491 139 HOH HOH . G 5 HOH A 92 492 31 HOH HOH . G 5 HOH A 93 493 145 HOH HOH . G 5 HOH A 94 494 30 HOH HOH . G 5 HOH A 95 495 12 HOH HOH . G 5 HOH A 96 496 37 HOH HOH . G 5 HOH A 97 497 55 HOH HOH . G 5 HOH A 98 498 76 HOH HOH . G 5 HOH A 99 499 64 HOH HOH . G 5 HOH A 100 500 71 HOH HOH . G 5 HOH A 101 501 116 HOH HOH . G 5 HOH A 102 502 27 HOH HOH . G 5 HOH A 103 503 178 HOH HOH . G 5 HOH A 104 504 21 HOH HOH . G 5 HOH A 105 505 154 HOH HOH . G 5 HOH A 106 506 17 HOH HOH . G 5 HOH A 107 507 46 HOH HOH . G 5 HOH A 108 508 43 HOH HOH . G 5 HOH A 109 509 121 HOH HOH . G 5 HOH A 110 510 170 HOH HOH . G 5 HOH A 111 511 138 HOH HOH . G 5 HOH A 112 512 159 HOH HOH . G 5 HOH A 113 513 66 HOH HOH . G 5 HOH A 114 514 160 HOH HOH . G 5 HOH A 115 515 23 HOH HOH . G 5 HOH A 116 516 88 HOH HOH . G 5 HOH A 117 517 63 HOH HOH . G 5 HOH A 118 518 5 HOH HOH . G 5 HOH A 119 519 149 HOH HOH . G 5 HOH A 120 520 96 HOH HOH . G 5 HOH A 121 521 111 HOH HOH . G 5 HOH A 122 522 194 HOH HOH . G 5 HOH A 123 523 147 HOH HOH . G 5 HOH A 124 524 184 HOH HOH . G 5 HOH A 125 525 126 HOH HOH . G 5 HOH A 126 526 150 HOH HOH . G 5 HOH A 127 527 50 HOH HOH . G 5 HOH A 128 528 203 HOH HOH . G 5 HOH A 129 529 129 HOH HOH . G 5 HOH A 130 530 191 HOH HOH . G 5 HOH A 131 531 119 HOH HOH . G 5 HOH A 132 532 175 HOH HOH . G 5 HOH A 133 533 44 HOH HOH . G 5 HOH A 134 534 125 HOH HOH . G 5 HOH A 135 535 173 HOH HOH . G 5 HOH A 136 536 169 HOH HOH . G 5 HOH A 137 537 122 HOH HOH . G 5 HOH A 138 538 155 HOH HOH . G 5 HOH A 139 539 123 HOH HOH . G 5 HOH A 140 540 16 HOH HOH . G 5 HOH A 141 541 65 HOH HOH . G 5 HOH A 142 542 131 HOH HOH . G 5 HOH A 143 543 24 HOH HOH . G 5 HOH A 144 544 144 HOH HOH . G 5 HOH A 145 545 52 HOH HOH . G 5 HOH A 146 546 180 HOH HOH . G 5 HOH A 147 547 200 HOH HOH . G 5 HOH A 148 548 168 HOH HOH . G 5 HOH A 149 549 29 HOH HOH . G 5 HOH A 150 550 190 HOH HOH . G 5 HOH A 151 551 192 HOH HOH . G 5 HOH A 152 552 196 HOH HOH . G 5 HOH A 153 553 181 HOH HOH . G 5 HOH A 154 554 133 HOH HOH . G 5 HOH A 155 555 54 HOH HOH . G 5 HOH A 156 556 198 HOH HOH . G 5 HOH A 157 557 132 HOH HOH . G 5 HOH A 158 558 188 HOH HOH . G 5 HOH A 159 559 185 HOH HOH . G 5 HOH A 160 560 94 HOH HOH . G 5 HOH A 161 561 174 HOH HOH . G 5 HOH A 162 562 172 HOH HOH . G 5 HOH A 163 563 148 HOH HOH . G 5 HOH A 164 564 127 HOH HOH . G 5 HOH A 165 565 156 HOH HOH . G 5 HOH A 166 566 45 HOH HOH . G 5 HOH A 167 567 177 HOH HOH . G 5 HOH A 168 568 130 HOH HOH . G 5 HOH A 169 569 165 HOH HOH . G 5 HOH A 170 570 57 HOH HOH . G 5 HOH A 171 571 164 HOH HOH . G 5 HOH A 172 572 68 HOH HOH . G 5 HOH A 173 573 115 HOH HOH . G 5 HOH A 174 574 152 HOH HOH . G 5 HOH A 175 575 171 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . B 2 39.56 -32.992 84.707 1 48.21 ? C ACT 301 A 1 HETATM 2 O O ACT . . . B 2 40.634 -32.953 84.075 1 56.33 ? O ACT 301 A 1 HETATM 3 O OXT ACT . . . B 2 39.516 -32.722 85.929 1 46.05 ? OXT ACT 301 A 1 HETATM 4 C CH3 ACT . . . B 2 38.336 -33.393 83.952 1 44.9 ? CH3 ACT 301 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #