data_5QGX # _model_server_result.job_id 7Cn52sluGGSRPyrpnbsWag _model_server_result.datetime_utc '2024-12-23 06:31:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5qgx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 5QGX # _exptl.entry_id 5QGX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5QGX _cell.length_a 124.15 _cell.length_b 124.15 _cell.length_c 40.874 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5QGX _symmetry.cell_setting ? _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 3 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ARG 87 A ARG 101 1_555 A N HYP 88 A HYP 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.35 ? covale ? covale2 A C HYP 88 A HYP 102 1_555 A N HIS 89 A HIS 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale3 A C VAL 94 A VAL 108 1_555 A N CSO 95 A CSO 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 A C CSO 95 A CSO 109 1_555 A N CYS 96 A CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 5QGX _atom_sites.fract_transf_matrix[1][1] 0.008055 _atom_sites.fract_transf_matrix[1][2] 0.00465 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009301 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.024465 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACT A 1 301 1 ACT ACT . C 2 ACT A 1 302 2 ACT ACT . D 3 DMS A 1 303 1 DMS DMS . E 3 DMS A 1 304 2 DMS DMS . F 4 H2J A 1 305 1 H2J LIG . G 5 HOH A 1 401 9 HOH HOH . G 5 HOH A 2 402 166 HOH HOH . G 5 HOH A 3 403 143 HOH HOH . G 5 HOH A 4 404 162 HOH HOH . G 5 HOH A 5 405 64 HOH HOH . G 5 HOH A 6 406 94 HOH HOH . G 5 HOH A 7 407 124 HOH HOH . G 5 HOH A 8 408 79 HOH HOH . G 5 HOH A 9 409 113 HOH HOH . G 5 HOH A 10 410 15 HOH HOH . G 5 HOH A 11 411 26 HOH HOH . G 5 HOH A 12 412 61 HOH HOH . G 5 HOH A 13 413 197 HOH HOH . G 5 HOH A 14 414 199 HOH HOH . G 5 HOH A 15 415 19 HOH HOH . G 5 HOH A 16 416 53 HOH HOH . G 5 HOH A 17 417 167 HOH HOH . G 5 HOH A 18 418 116 HOH HOH . G 5 HOH A 19 419 105 HOH HOH . G 5 HOH A 20 420 118 HOH HOH . G 5 HOH A 21 421 20 HOH HOH . G 5 HOH A 22 422 179 HOH HOH . G 5 HOH A 23 423 25 HOH HOH . G 5 HOH A 24 424 109 HOH HOH . G 5 HOH A 25 425 125 HOH HOH . G 5 HOH A 26 426 13 HOH HOH . G 5 HOH A 27 427 157 HOH HOH . G 5 HOH A 28 428 140 HOH HOH . G 5 HOH A 29 429 80 HOH HOH . G 5 HOH A 30 430 102 HOH HOH . G 5 HOH A 31 431 186 HOH HOH . G 5 HOH A 32 432 108 HOH HOH . G 5 HOH A 33 433 117 HOH HOH . G 5 HOH A 34 434 97 HOH HOH . G 5 HOH A 35 435 134 HOH HOH . G 5 HOH A 36 436 202 HOH HOH . G 5 HOH A 37 437 101 HOH HOH . G 5 HOH A 38 438 146 HOH HOH . G 5 HOH A 39 439 35 HOH HOH . G 5 HOH A 40 440 6 HOH HOH . G 5 HOH A 41 441 10 HOH HOH . G 5 HOH A 42 442 139 HOH HOH . G 5 HOH A 43 443 3 HOH HOH . G 5 HOH A 44 444 58 HOH HOH . G 5 HOH A 45 445 59 HOH HOH . G 5 HOH A 46 446 12 HOH HOH . G 5 HOH A 47 447 49 HOH HOH . G 5 HOH A 48 448 206 HOH HOH . G 5 HOH A 49 449 14 HOH HOH . G 5 HOH A 50 450 153 HOH HOH . G 5 HOH A 51 451 158 HOH HOH . G 5 HOH A 52 452 207 HOH HOH . G 5 HOH A 53 453 34 HOH HOH . G 5 HOH A 54 454 36 HOH HOH . G 5 HOH A 55 455 141 HOH HOH . G 5 HOH A 56 456 39 HOH HOH . G 5 HOH A 57 457 62 HOH HOH . G 5 HOH A 58 458 85 HOH HOH . G 5 HOH A 59 459 193 HOH HOH . G 5 HOH A 60 460 99 HOH HOH . G 5 HOH A 61 461 137 HOH HOH . G 5 HOH A 62 462 104 HOH HOH . G 5 HOH A 63 463 38 HOH HOH . G 5 HOH A 64 464 103 HOH HOH . G 5 HOH A 65 465 201 HOH HOH . G 5 HOH A 66 466 22 HOH HOH . G 5 HOH A 67 467 45 HOH HOH . G 5 HOH A 68 468 7 HOH HOH . G 5 HOH A 69 469 2 HOH HOH . G 5 HOH A 70 470 46 HOH HOH . G 5 HOH A 71 471 42 HOH HOH . G 5 HOH A 72 472 56 HOH HOH . G 5 HOH A 73 473 8 HOH HOH . G 5 HOH A 74 474 75 HOH HOH . G 5 HOH A 75 475 71 HOH HOH . G 5 HOH A 76 476 1 HOH HOH . G 5 HOH A 77 477 88 HOH HOH . G 5 HOH A 78 478 152 HOH HOH . G 5 HOH A 79 479 78 HOH HOH . G 5 HOH A 80 480 55 HOH HOH . G 5 HOH A 81 481 37 HOH HOH . G 5 HOH A 82 482 170 HOH HOH . G 5 HOH A 83 483 72 HOH HOH . G 5 HOH A 84 484 30 HOH HOH . G 5 HOH A 85 485 63 HOH HOH . G 5 HOH A 86 486 27 HOH HOH . G 5 HOH A 87 487 98 HOH HOH . G 5 HOH A 88 488 31 HOH HOH . G 5 HOH A 89 489 28 HOH HOH . G 5 HOH A 90 490 51 HOH HOH . G 5 HOH A 91 491 121 HOH HOH . G 5 HOH A 92 492 176 HOH HOH . G 5 HOH A 93 493 96 HOH HOH . G 5 HOH A 94 494 24 HOH HOH . G 5 HOH A 95 495 191 HOH HOH . G 5 HOH A 96 496 21 HOH HOH . G 5 HOH A 97 497 17 HOH HOH . G 5 HOH A 98 498 43 HOH HOH . G 5 HOH A 99 499 200 HOH HOH . G 5 HOH A 100 500 154 HOH HOH . G 5 HOH A 101 501 5 HOH HOH . G 5 HOH A 102 502 145 HOH HOH . G 5 HOH A 103 503 106 HOH HOH . G 5 HOH A 104 504 149 HOH HOH . G 5 HOH A 105 505 155 HOH HOH . G 5 HOH A 106 506 182 HOH HOH . G 5 HOH A 107 507 138 HOH HOH . G 5 HOH A 108 508 50 HOH HOH . G 5 HOH A 109 509 194 HOH HOH . G 5 HOH A 110 510 208 HOH HOH . G 5 HOH A 111 511 126 HOH HOH . G 5 HOH A 112 512 23 HOH HOH . G 5 HOH A 113 513 122 HOH HOH . G 5 HOH A 114 514 184 HOH HOH . G 5 HOH A 115 515 159 HOH HOH . G 5 HOH A 116 516 111 HOH HOH . G 5 HOH A 117 517 110 HOH HOH . G 5 HOH A 118 518 178 HOH HOH . G 5 HOH A 119 519 44 HOH HOH . G 5 HOH A 120 520 163 HOH HOH . G 5 HOH A 121 521 18 HOH HOH . G 5 HOH A 122 522 16 HOH HOH . G 5 HOH A 123 523 57 HOH HOH . G 5 HOH A 124 524 147 HOH HOH . G 5 HOH A 125 525 169 HOH HOH . G 5 HOH A 126 526 119 HOH HOH . G 5 HOH A 127 527 129 HOH HOH . G 5 HOH A 128 528 127 HOH HOH . G 5 HOH A 129 529 161 HOH HOH . G 5 HOH A 130 530 93 HOH HOH . G 5 HOH A 131 531 203 HOH HOH . G 5 HOH A 132 532 172 HOH HOH . G 5 HOH A 133 533 205 HOH HOH . G 5 HOH A 134 534 177 HOH HOH . G 5 HOH A 135 535 66 HOH HOH . G 5 HOH A 136 536 150 HOH HOH . G 5 HOH A 137 537 174 HOH HOH . G 5 HOH A 138 538 144 HOH HOH . G 5 HOH A 139 539 204 HOH HOH . G 5 HOH A 140 540 123 HOH HOH . G 5 HOH A 141 541 173 HOH HOH . G 5 HOH A 142 542 190 HOH HOH . G 5 HOH A 143 543 29 HOH HOH . G 5 HOH A 144 544 168 HOH HOH . G 5 HOH A 145 545 192 HOH HOH . G 5 HOH A 146 546 52 HOH HOH . G 5 HOH A 147 547 132 HOH HOH . G 5 HOH A 148 548 54 HOH HOH . G 5 HOH A 149 549 188 HOH HOH . G 5 HOH A 150 550 133 HOH HOH . G 5 HOH A 151 551 185 HOH HOH . G 5 HOH A 152 552 171 HOH HOH . G 5 HOH A 153 553 195 HOH HOH . G 5 HOH A 154 554 148 HOH HOH . G 5 HOH A 155 555 131 HOH HOH . G 5 HOH A 156 556 165 HOH HOH . G 5 HOH A 157 557 130 HOH HOH . G 5 HOH A 158 558 68 HOH HOH . G 5 HOH A 159 559 164 HOH HOH . G 5 HOH A 160 560 115 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . B 2 39.116 -32.259 83.413 1 48.81 ? C ACT 301 A 1 HETATM 2 O O ACT . . . B 2 40.133 -32.187 82.684 1 50.24 ? O ACT 301 A 1 HETATM 3 O OXT ACT . . . B 2 39.191 -32.127 84.648 1 42.73 ? OXT ACT 301 A 1 HETATM 4 C CH3 ACT . . . B 2 37.772 -32.516 82.801 1 49.03 ? CH3 ACT 301 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 50 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 330 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #