data_5QHJ
#
_model_server_result.job_id            pzYRY_g4IIN9vjRfsLQE9w 
_model_server_result.datetime_utc      '2024-11-14 03:43:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5qhj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":302}' 
#
_entry.id    5QHJ 
#
_exptl.entry_id    5QHJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          96.45 
_cell.angle_gamma         90 
_cell.entry_id            5QHJ 
_cell.length_a            37.63 
_cell.length_b            74.27 
_cell.length_c            63.49 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5QHJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 L N N 
? 3 M N N 
? 3 N N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     5QHJ 
_atom_sites.fract_transf_matrix[1][1]    0.026575 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003004 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013464 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015851 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 IOD A 1 301 1 IOD IOD . 
D 2 IOD A 1 302 2 IOD IOD . 
E 2 IOD A 1 303 3 IOD IOD . 
F 2 IOD A 1 304 4 IOD IOD . 
G 3 EDO A 1 305 1 EDO EDO . 
H 3 EDO A 1 306 4 EDO EDO . 
I 3 EDO A 1 307 5 EDO EDO . 
J 3 EDO A 1 308 6 EDO EDO . 
K 4 GOV A 1 309 2 GOV LIG . 
L 3 EDO B 1 301 2 EDO EDO . 
M 3 EDO B 1 302 3 EDO EDO . 
N 3 EDO B 1 303 7 EDO EDO . 
O 4 GOV B 1 304 1 GOV LIG . 
P 5 HOH A 1 401 208 HOH HOH . 
P 5 HOH A 2 402 195 HOH HOH . 
P 5 HOH A 3 403 272 HOH HOH . 
P 5 HOH A 4 404 24 HOH HOH . 
P 5 HOH A 5 405 247 HOH HOH . 
P 5 HOH A 6 406 133 HOH HOH . 
P 5 HOH A 7 407 14 HOH HOH . 
P 5 HOH A 8 408 91 HOH HOH . 
P 5 HOH A 9 409 59 HOH HOH . 
P 5 HOH A 10 410 6 HOH HOH . 
P 5 HOH A 11 411 250 HOH HOH . 
P 5 HOH A 12 412 68 HOH HOH . 
P 5 HOH A 13 413 176 HOH HOH . 
P 5 HOH A 14 414 99 HOH HOH . 
P 5 HOH A 15 415 150 HOH HOH . 
P 5 HOH A 16 416 204 HOH HOH . 
P 5 HOH A 17 417 114 HOH HOH . 
P 5 HOH A 18 418 51 HOH HOH . 
P 5 HOH A 19 419 53 HOH HOH . 
P 5 HOH A 20 420 126 HOH HOH . 
P 5 HOH A 21 421 146 HOH HOH . 
P 5 HOH A 22 422 15 HOH HOH . 
P 5 HOH A 23 423 63 HOH HOH . 
P 5 HOH A 24 424 70 HOH HOH . 
P 5 HOH A 25 425 253 HOH HOH . 
P 5 HOH A 26 426 61 HOH HOH . 
P 5 HOH A 27 427 148 HOH HOH . 
P 5 HOH A 28 428 203 HOH HOH . 
P 5 HOH A 29 429 5 HOH HOH . 
P 5 HOH A 30 430 21 HOH HOH . 
P 5 HOH A 31 431 278 HOH HOH . 
P 5 HOH A 32 432 55 HOH HOH . 
P 5 HOH A 33 433 110 HOH HOH . 
P 5 HOH A 34 434 22 HOH HOH . 
P 5 HOH A 35 435 3 HOH HOH . 
P 5 HOH A 36 436 48 HOH HOH . 
P 5 HOH A 37 437 108 HOH HOH . 
P 5 HOH A 38 438 79 HOH HOH . 
P 5 HOH A 39 439 226 HOH HOH . 
P 5 HOH A 40 440 52 HOH HOH . 
P 5 HOH A 41 441 240 HOH HOH . 
P 5 HOH A 42 442 101 HOH HOH . 
P 5 HOH A 43 443 112 HOH HOH . 
P 5 HOH A 44 444 107 HOH HOH . 
P 5 HOH A 45 445 37 HOH HOH . 
P 5 HOH A 46 446 172 HOH HOH . 
P 5 HOH A 47 447 16 HOH HOH . 
P 5 HOH A 48 448 123 HOH HOH . 
P 5 HOH A 49 449 30 HOH HOH . 
P 5 HOH A 50 450 164 HOH HOH . 
P 5 HOH A 51 451 254 HOH HOH . 
P 5 HOH A 52 452 25 HOH HOH . 
P 5 HOH A 53 453 153 HOH HOH . 
P 5 HOH A 54 454 151 HOH HOH . 
P 5 HOH A 55 455 174 HOH HOH . 
P 5 HOH A 56 456 170 HOH HOH . 
P 5 HOH A 57 457 32 HOH HOH . 
P 5 HOH A 58 458 103 HOH HOH . 
P 5 HOH A 59 459 140 HOH HOH . 
P 5 HOH A 60 460 82 HOH HOH . 
P 5 HOH A 61 461 274 HOH HOH . 
P 5 HOH A 62 462 243 HOH HOH . 
P 5 HOH A 63 463 35 HOH HOH . 
P 5 HOH A 64 464 241 HOH HOH . 
P 5 HOH A 65 465 270 HOH HOH . 
P 5 HOH A 66 466 251 HOH HOH . 
P 5 HOH A 67 467 136 HOH HOH . 
P 5 HOH A 68 468 121 HOH HOH . 
P 5 HOH A 69 469 71 HOH HOH . 
P 5 HOH A 70 470 29 HOH HOH . 
P 5 HOH A 71 471 12 HOH HOH . 
P 5 HOH A 72 472 89 HOH HOH . 
P 5 HOH A 73 473 84 HOH HOH . 
P 5 HOH A 74 474 139 HOH HOH . 
P 5 HOH A 75 475 168 HOH HOH . 
P 5 HOH A 76 476 73 HOH HOH . 
P 5 HOH A 77 477 202 HOH HOH . 
P 5 HOH A 78 478 102 HOH HOH . 
P 5 HOH A 79 479 7 HOH HOH . 
P 5 HOH A 80 480 125 HOH HOH . 
P 5 HOH A 81 481 26 HOH HOH . 
P 5 HOH A 82 482 259 HOH HOH . 
P 5 HOH A 83 483 185 HOH HOH . 
P 5 HOH A 84 484 120 HOH HOH . 
P 5 HOH A 85 485 214 HOH HOH . 
P 5 HOH A 86 486 31 HOH HOH . 
P 5 HOH A 87 487 188 HOH HOH . 
P 5 HOH A 88 488 45 HOH HOH . 
P 5 HOH A 89 489 56 HOH HOH . 
P 5 HOH A 90 490 271 HOH HOH . 
P 5 HOH A 91 491 257 HOH HOH . 
P 5 HOH A 92 492 88 HOH HOH . 
P 5 HOH A 93 493 2 HOH HOH . 
P 5 HOH A 94 494 194 HOH HOH . 
P 5 HOH A 95 495 220 HOH HOH . 
P 5 HOH A 96 496 155 HOH HOH . 
P 5 HOH A 97 497 233 HOH HOH . 
P 5 HOH A 98 498 193 HOH HOH . 
P 5 HOH A 99 499 261 HOH HOH . 
P 5 HOH A 100 500 46 HOH HOH . 
P 5 HOH A 101 501 236 HOH HOH . 
P 5 HOH A 102 502 199 HOH HOH . 
P 5 HOH A 103 503 249 HOH HOH . 
P 5 HOH A 104 504 169 HOH HOH . 
P 5 HOH A 105 505 129 HOH HOH . 
P 5 HOH A 106 506 135 HOH HOH . 
P 5 HOH A 107 507 192 HOH HOH . 
P 5 HOH A 108 508 81 HOH HOH . 
P 5 HOH A 109 509 165 HOH HOH . 
P 5 HOH A 110 510 134 HOH HOH . 
P 5 HOH A 111 511 260 HOH HOH . 
P 5 HOH A 112 512 44 HOH HOH . 
P 5 HOH A 113 513 205 HOH HOH . 
P 5 HOH A 114 514 157 HOH HOH . 
P 5 HOH A 115 515 156 HOH HOH . 
P 5 HOH A 116 516 152 HOH HOH . 
P 5 HOH A 117 517 258 HOH HOH . 
P 5 HOH A 118 518 98 HOH HOH . 
P 5 HOH A 119 519 141 HOH HOH . 
P 5 HOH A 120 520 166 HOH HOH . 
P 5 HOH A 121 521 232 HOH HOH . 
P 5 HOH A 122 522 143 HOH HOH . 
P 5 HOH A 123 523 218 HOH HOH . 
P 5 HOH A 124 524 222 HOH HOH . 
P 5 HOH A 125 525 277 HOH HOH . 
P 5 HOH A 126 526 92 HOH HOH . 
P 5 HOH A 127 527 276 HOH HOH . 
P 5 HOH A 128 528 186 HOH HOH . 
P 5 HOH A 129 529 130 HOH HOH . 
P 5 HOH A 130 530 279 HOH HOH . 
P 5 HOH A 131 531 256 HOH HOH . 
P 5 HOH A 132 532 216 HOH HOH . 
P 5 HOH A 133 533 159 HOH HOH . 
P 5 HOH A 134 534 224 HOH HOH . 
P 5 HOH A 135 535 173 HOH HOH . 
P 5 HOH A 136 536 178 HOH HOH . 
P 5 HOH A 137 537 171 HOH HOH . 
P 5 HOH A 138 538 183 HOH HOH . 
Q 5 HOH B 1 401 138 HOH HOH . 
Q 5 HOH B 2 402 39 HOH HOH . 
Q 5 HOH B 3 403 273 HOH HOH . 
Q 5 HOH B 4 404 109 HOH HOH . 
Q 5 HOH B 5 405 245 HOH HOH . 
Q 5 HOH B 6 406 69 HOH HOH . 
Q 5 HOH B 7 407 58 HOH HOH . 
Q 5 HOH B 8 408 100 HOH HOH . 
Q 5 HOH B 9 409 128 HOH HOH . 
Q 5 HOH B 10 410 145 HOH HOH . 
Q 5 HOH B 11 411 132 HOH HOH . 
Q 5 HOH B 12 412 209 HOH HOH . 
Q 5 HOH B 13 413 66 HOH HOH . 
Q 5 HOH B 14 414 11 HOH HOH . 
Q 5 HOH B 15 415 206 HOH HOH . 
Q 5 HOH B 16 416 77 HOH HOH . 
Q 5 HOH B 17 417 13 HOH HOH . 
Q 5 HOH B 18 418 227 HOH HOH . 
Q 5 HOH B 19 419 119 HOH HOH . 
Q 5 HOH B 20 420 201 HOH HOH . 
Q 5 HOH B 21 421 179 HOH HOH . 
Q 5 HOH B 22 422 267 HOH HOH . 
Q 5 HOH B 23 423 18 HOH HOH . 
Q 5 HOH B 24 424 87 HOH HOH . 
Q 5 HOH B 25 425 19 HOH HOH . 
Q 5 HOH B 26 426 57 HOH HOH . 
Q 5 HOH B 27 427 9 HOH HOH . 
Q 5 HOH B 28 428 219 HOH HOH . 
Q 5 HOH B 29 429 60 HOH HOH . 
Q 5 HOH B 30 430 94 HOH HOH . 
Q 5 HOH B 31 431 269 HOH HOH . 
Q 5 HOH B 32 432 72 HOH HOH . 
Q 5 HOH B 33 433 10 HOH HOH . 
Q 5 HOH B 34 434 4 HOH HOH . 
Q 5 HOH B 35 435 50 HOH HOH . 
Q 5 HOH B 36 436 40 HOH HOH . 
Q 5 HOH B 37 437 231 HOH HOH . 
Q 5 HOH B 38 438 252 HOH HOH . 
Q 5 HOH B 39 439 78 HOH HOH . 
Q 5 HOH B 40 440 83 HOH HOH . 
Q 5 HOH B 41 441 147 HOH HOH . 
Q 5 HOH B 42 442 74 HOH HOH . 
Q 5 HOH B 43 443 95 HOH HOH . 
Q 5 HOH B 44 444 177 HOH HOH . 
Q 5 HOH B 45 445 36 HOH HOH . 
Q 5 HOH B 46 446 8 HOH HOH . 
Q 5 HOH B 47 447 275 HOH HOH . 
Q 5 HOH B 48 448 76 HOH HOH . 
Q 5 HOH B 49 449 64 HOH HOH . 
Q 5 HOH B 50 450 111 HOH HOH . 
Q 5 HOH B 51 451 49 HOH HOH . 
Q 5 HOH B 52 452 105 HOH HOH . 
Q 5 HOH B 53 453 264 HOH HOH . 
Q 5 HOH B 54 454 180 HOH HOH . 
Q 5 HOH B 55 455 20 HOH HOH . 
Q 5 HOH B 56 456 161 HOH HOH . 
Q 5 HOH B 57 457 85 HOH HOH . 
Q 5 HOH B 58 458 142 HOH HOH . 
Q 5 HOH B 59 459 80 HOH HOH . 
Q 5 HOH B 60 460 104 HOH HOH . 
Q 5 HOH B 61 461 47 HOH HOH . 
Q 5 HOH B 62 462 65 HOH HOH . 
Q 5 HOH B 63 463 191 HOH HOH . 
Q 5 HOH B 64 464 38 HOH HOH . 
Q 5 HOH B 65 465 158 HOH HOH . 
Q 5 HOH B 66 466 41 HOH HOH . 
Q 5 HOH B 67 467 43 HOH HOH . 
Q 5 HOH B 68 468 33 HOH HOH . 
Q 5 HOH B 69 469 242 HOH HOH . 
Q 5 HOH B 70 470 34 HOH HOH . 
Q 5 HOH B 71 471 225 HOH HOH . 
Q 5 HOH B 72 472 118 HOH HOH . 
Q 5 HOH B 73 473 244 HOH HOH . 
Q 5 HOH B 74 474 90 HOH HOH . 
Q 5 HOH B 75 475 67 HOH HOH . 
Q 5 HOH B 76 476 167 HOH HOH . 
Q 5 HOH B 77 477 54 HOH HOH . 
Q 5 HOH B 78 478 23 HOH HOH . 
Q 5 HOH B 79 479 212 HOH HOH . 
Q 5 HOH B 80 480 106 HOH HOH . 
Q 5 HOH B 81 481 137 HOH HOH . 
Q 5 HOH B 82 482 17 HOH HOH . 
Q 5 HOH B 83 483 62 HOH HOH . 
Q 5 HOH B 84 484 149 HOH HOH . 
Q 5 HOH B 85 485 96 HOH HOH . 
Q 5 HOH B 86 486 144 HOH HOH . 
Q 5 HOH B 87 487 93 HOH HOH . 
Q 5 HOH B 88 488 238 HOH HOH . 
Q 5 HOH B 89 489 113 HOH HOH . 
Q 5 HOH B 90 490 239 HOH HOH . 
Q 5 HOH B 91 491 115 HOH HOH . 
Q 5 HOH B 92 492 187 HOH HOH . 
Q 5 HOH B 93 493 196 HOH HOH . 
Q 5 HOH B 94 494 181 HOH HOH . 
Q 5 HOH B 95 495 27 HOH HOH . 
Q 5 HOH B 96 496 28 HOH HOH . 
Q 5 HOH B 97 497 1 HOH HOH . 
Q 5 HOH B 98 498 124 HOH HOH . 
Q 5 HOH B 99 499 86 HOH HOH . 
Q 5 HOH B 100 500 116 HOH HOH . 
Q 5 HOH B 101 501 228 HOH HOH . 
Q 5 HOH B 102 502 262 HOH HOH . 
Q 5 HOH B 103 503 154 HOH HOH . 
Q 5 HOH B 104 504 223 HOH HOH . 
Q 5 HOH B 105 505 198 HOH HOH . 
Q 5 HOH B 106 506 280 HOH HOH . 
Q 5 HOH B 107 507 211 HOH HOH . 
Q 5 HOH B 108 508 213 HOH HOH . 
Q 5 HOH B 109 509 131 HOH HOH . 
Q 5 HOH B 110 510 207 HOH HOH . 
Q 5 HOH B 111 511 75 HOH HOH . 
Q 5 HOH B 112 512 221 HOH HOH . 
Q 5 HOH B 113 513 197 HOH HOH . 
Q 5 HOH B 114 514 200 HOH HOH . 
Q 5 HOH B 115 515 163 HOH HOH . 
Q 5 HOH B 116 516 263 HOH HOH . 
Q 5 HOH B 117 517 127 HOH HOH . 
Q 5 HOH B 118 518 42 HOH HOH . 
Q 5 HOH B 119 519 182 HOH HOH . 
Q 5 HOH B 120 520 268 HOH HOH . 
Q 5 HOH B 121 521 266 HOH HOH . 
Q 5 HOH B 122 522 230 HOH HOH . 
Q 5 HOH B 123 523 234 HOH HOH . 
Q 5 HOH B 124 524 122 HOH HOH . 
Q 5 HOH B 125 525 117 HOH HOH . 
Q 5 HOH B 126 526 210 HOH HOH . 
Q 5 HOH B 127 527 235 HOH HOH . 
Q 5 HOH B 128 528 184 HOH HOH . 
Q 5 HOH B 129 529 175 HOH HOH . 
Q 5 HOH B 130 530 255 HOH HOH . 
Q 5 HOH B 131 531 160 HOH HOH . 
Q 5 HOH B 132 532 265 HOH HOH . 
Q 5 HOH B 133 533 248 HOH HOH . 
Q 5 HOH B 134 534 162 HOH HOH . 
Q 5 HOH B 135 535 215 HOH HOH . 
Q 5 HOH B 136 536 237 HOH HOH . 
Q 5 HOH B 137 537 189 HOH HOH . 
Q 5 HOH B 138 538 229 HOH HOH . 
Q 5 HOH B 139 539 246 HOH HOH . 
Q 5 HOH B 140 540 217 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . M 3 -8.238 -32.347 67.61 1 37.96 ? C1 EDO 302 B 1 
HETATM 2 O O1 EDO . . . M 3 -8.432 -32.62 66.204 1 43.83 ? O1 EDO 302 B 1 
HETATM 3 C C2 EDO . . . M 3 -8.112 -33.589 68.555 1 34.73 ? C2 EDO 302 B 1 
HETATM 4 O O2 EDO . . . M 3 -9.318 -34.407 68.744 1 30.9 ? O2 EDO 302 B 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    27 
_model_server_stats.query_time_ms           341 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           4 
#