data_5QHO
#
_model_server_result.job_id            flWI1UuRm3JQNRyoRUPs8Q 
_model_server_result.datetime_utc      '2025-07-17 20:31:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5qho 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":203}' 
#
_entry.id    5QHO 
#
_exptl.entry_id    5QHO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              196.289 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            di(piperidin-1-yl)methanone 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5QHO 
_cell.length_a            50.52 
_cell.length_b            50.52 
_cell.length_c            152.856 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5QHO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        91 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 41 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 7_465 y-1,x+1,-z+3/4 0 1 0 1 0 0 0 0 -1 -50.52 50.52 114.642 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   disulf 
_struct_conn.details                        ? 
_struct_conn.id                             disulf1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             167 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              167 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            A 
_struct_conn.ptnr2_label_atom_id            SG 
_struct_conn.ptnr2_label_comp_id            CYS 
_struct_conn.ptnr2_label_seq_id             167 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             CYS 
_struct_conn.ptnr2_auth_seq_id              167 
_struct_conn.ptnr2_symmetry                 5_556 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.003 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C11 H20 N2 O' 
_chem_comp.formula_weight    196.289 
_chem_comp.id                GOY 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              di(piperidin-1-yl)methanone 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C GOY sing 138 n n 
C1 C2 GOY sing 139 n n 
C C4 GOY sing 140 n n 
C2 N GOY sing 141 n n 
C4 C3 GOY sing 142 n n 
N C3 GOY sing 143 n n 
N C5 GOY sing 144 n n 
O C5 GOY doub 145 n n 
C5 N1 GOY sing 146 n n 
C10 N1 GOY sing 147 n n 
C10 C9 GOY sing 148 n n 
N1 C6 GOY sing 149 n n 
C9 C8 GOY sing 150 n n 
C6 C7 GOY sing 151 n n 
C8 C7 GOY sing 152 n n 
C4 H1 GOY sing 153 n n 
C4 H2 GOY sing 154 n n 
C6 H3 GOY sing 155 n n 
C6 H4 GOY sing 156 n n 
C7 H5 GOY sing 157 n n 
C7 H6 GOY sing 158 n n 
C8 H7 GOY sing 159 n n 
C8 H8 GOY sing 160 n n 
C10 H9 GOY sing 161 n n 
C10 H10 GOY sing 162 n n 
C H11 GOY sing 163 n n 
C H12 GOY sing 164 n n 
C1 H13 GOY sing 165 n n 
C1 H14 GOY sing 166 n n 
C2 H15 GOY sing 167 n n 
C2 H16 GOY sing 168 n n 
C3 H17 GOY sing 169 n n 
C3 H18 GOY sing 170 n n 
C9 H19 GOY sing 171 n n 
C9 H20 GOY sing 172 n n 
#
_atom_sites.entry_id                     5QHO 
_atom_sites.fract_transf_matrix[1][1]    0.019794 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019794 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006542 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 EDO A 1 201 1 EDO EDO . 
C 2 EDO A 1 202 2 EDO EDO . 
D 3 GOY A 1 203 1 GOY LIG . 
E 4 HOH A 1 301 21 HOH HOH . 
E 4 HOH A 2 302 64 HOH HOH . 
E 4 HOH A 3 303 79 HOH HOH . 
E 4 HOH A 4 304 97 HOH HOH . 
E 4 HOH A 5 305 61 HOH HOH . 
E 4 HOH A 6 306 56 HOH HOH . 
E 4 HOH A 7 307 49 HOH HOH . 
E 4 HOH A 8 308 28 HOH HOH . 
E 4 HOH A 9 309 30 HOH HOH . 
E 4 HOH A 10 310 68 HOH HOH . 
E 4 HOH A 11 311 98 HOH HOH . 
E 4 HOH A 12 312 42 HOH HOH . 
E 4 HOH A 13 313 51 HOH HOH . 
E 4 HOH A 14 314 46 HOH HOH . 
E 4 HOH A 15 315 58 HOH HOH . 
E 4 HOH A 16 316 59 HOH HOH . 
E 4 HOH A 17 317 39 HOH HOH . 
E 4 HOH A 18 318 19 HOH HOH . 
E 4 HOH A 19 319 2 HOH HOH . 
E 4 HOH A 20 320 95 HOH HOH . 
E 4 HOH A 21 321 86 HOH HOH . 
E 4 HOH A 22 322 12 HOH HOH . 
E 4 HOH A 23 323 94 HOH HOH . 
E 4 HOH A 24 324 26 HOH HOH . 
E 4 HOH A 25 325 91 HOH HOH . 
E 4 HOH A 26 326 4 HOH HOH . 
E 4 HOH A 27 327 29 HOH HOH . 
E 4 HOH A 28 328 55 HOH HOH . 
E 4 HOH A 29 329 71 HOH HOH . 
E 4 HOH A 30 330 37 HOH HOH . 
E 4 HOH A 31 331 10 HOH HOH . 
E 4 HOH A 32 332 88 HOH HOH . 
E 4 HOH A 33 333 13 HOH HOH . 
E 4 HOH A 34 334 17 HOH HOH . 
E 4 HOH A 35 335 1 HOH HOH . 
E 4 HOH A 36 336 8 HOH HOH . 
E 4 HOH A 37 337 82 HOH HOH . 
E 4 HOH A 38 338 87 HOH HOH . 
E 4 HOH A 39 339 9 HOH HOH . 
E 4 HOH A 40 340 93 HOH HOH . 
E 4 HOH A 41 341 36 HOH HOH . 
E 4 HOH A 42 342 7 HOH HOH . 
E 4 HOH A 43 343 40 HOH HOH . 
E 4 HOH A 44 344 22 HOH HOH . 
E 4 HOH A 45 345 3 HOH HOH . 
E 4 HOH A 46 346 96 HOH HOH . 
E 4 HOH A 47 347 81 HOH HOH . 
E 4 HOH A 48 348 6 HOH HOH . 
E 4 HOH A 49 349 23 HOH HOH . 
E 4 HOH A 50 350 77 HOH HOH . 
E 4 HOH A 51 351 80 HOH HOH . 
E 4 HOH A 52 352 11 HOH HOH . 
E 4 HOH A 53 353 60 HOH HOH . 
E 4 HOH A 54 354 83 HOH HOH . 
E 4 HOH A 55 355 62 HOH HOH . 
E 4 HOH A 56 356 14 HOH HOH . 
E 4 HOH A 57 357 90 HOH HOH . 
E 4 HOH A 58 358 5 HOH HOH . 
E 4 HOH A 59 359 66 HOH HOH . 
E 4 HOH A 60 360 44 HOH HOH . 
E 4 HOH A 61 361 20 HOH HOH . 
E 4 HOH A 62 362 15 HOH HOH . 
E 4 HOH A 63 363 24 HOH HOH . 
E 4 HOH A 64 364 16 HOH HOH . 
E 4 HOH A 65 365 45 HOH HOH . 
E 4 HOH A 66 366 63 HOH HOH . 
E 4 HOH A 67 367 34 HOH HOH . 
E 4 HOH A 68 368 25 HOH HOH . 
E 4 HOH A 69 369 67 HOH HOH . 
E 4 HOH A 70 370 84 HOH HOH . 
E 4 HOH A 71 371 48 HOH HOH . 
E 4 HOH A 72 372 69 HOH HOH . 
E 4 HOH A 73 373 18 HOH HOH . 
E 4 HOH A 74 374 53 HOH HOH . 
E 4 HOH A 75 375 78 HOH HOH . 
E 4 HOH A 76 376 33 HOH HOH . 
E 4 HOH A 77 377 74 HOH HOH . 
E 4 HOH A 78 378 89 HOH HOH . 
E 4 HOH A 79 379 41 HOH HOH . 
E 4 HOH A 80 380 35 HOH HOH . 
E 4 HOH A 81 381 72 HOH HOH . 
E 4 HOH A 82 382 32 HOH HOH . 
E 4 HOH A 83 383 70 HOH HOH . 
E 4 HOH A 84 384 38 HOH HOH . 
E 4 HOH A 85 385 52 HOH HOH . 
E 4 HOH A 86 386 85 HOH HOH . 
E 4 HOH A 87 387 73 HOH HOH . 
E 4 HOH A 88 388 92 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 GOY . . . D 3 14.471 40.67 70.288 0.72 39.93 ? N1 GOY 203 A 1 
HETATM 2 C C4 GOY . . . D 3 15.085 43.089 66.315 0.72 30.41 ? C4 GOY 203 A 1 
HETATM 3 C C5 GOY . . . D 3 15.313 41.356 69.479 0.72 37.7 ? C5 GOY 203 A 1 
HETATM 4 C C6 GOY . . . D 3 13.008 40.543 70.145 0.72 40.65 ? C6 GOY 203 A 1 
HETATM 5 C C7 GOY . . . D 3 12.397 39.584 71.148 0.72 41.87 ? C7 GOY 203 A 1 
HETATM 6 C C8 GOY . . . D 3 12.745 39.957 72.578 0.72 41.42 ? C8 GOY 203 A 1 
HETATM 7 C C10 GOY . . . D 3 15.012 39.948 71.454 0.72 43.34 ? C10 GOY 203 A 1 
HETATM 8 N N GOY . . . D 3 14.928 42.38 68.667 0.72 32.33 ? N GOY 203 A 1 
HETATM 9 C C GOY . . . D 3 14.078 44.212 66.478 0.72 32.3 ? C GOY 203 A 1 
HETATM 10 O O GOY . . . D 3 16.516 41.042 69.48 0.72 37.57 ? O GOY 203 A 1 
HETATM 11 C C1 GOY . . . D 3 13.741 44.441 67.939 0.72 35.01 ? C1 GOY 203 A 1 
HETATM 12 C C2 GOY . . . D 3 13.697 43.175 68.769 0.72 33.02 ? C2 GOY 203 A 1 
HETATM 13 C C3 GOY . . . D 3 15.836 42.834 67.608 0.72 31.84 ? C3 GOY 203 A 1 
HETATM 14 C C9 GOY . . . D 3 14.228 40.25 72.718 0.72 40.89 ? C9 GOY 203 A 1 
#
_model_server_stats.io_time_ms              61 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           333 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           14 
#