data_5QHQ
#
_model_server_result.job_id            ElETLBOhXONmQkML5mK9cA 
_model_server_result.datetime_utc      '2024-11-22 17:36:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5qhq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":203}' 
#
_entry.id    5QHQ 
#
_exptl.entry_id    5QHQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              226.249 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1-[(4-fluorophenyl)methyl]benzimidazole 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5QHQ 
_cell.length_a            50.484 
_cell.length_b            50.484 
_cell.length_c            154.218 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5QHQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        91 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 41 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 7_465 y-1,x+1,-z+3/4 0 1 0 1 0 0 0 0 -1 -50.484 50.484 115.6635 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
#
_struct_conn.conn_type_id                   disulf 
_struct_conn.details                        ? 
_struct_conn.id                             disulf1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             167 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              167 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            A 
_struct_conn.ptnr2_label_atom_id            SG 
_struct_conn.ptnr2_label_comp_id            CYS 
_struct_conn.ptnr2_label_seq_id             167 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             CYS 
_struct_conn.ptnr2_auth_seq_id              167 
_struct_conn.ptnr2_symmetry                 5_556 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.16 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C14 H11 F N2' 
_chem_comp.formula_weight    226.249 
_chem_comp.id                GQP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1-[(4-fluorophenyl)methyl]benzimidazole 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C6 GQP doub 138 n y 
C1 C2 GQP sing 139 n y 
C6 C5 GQP sing 140 n y 
C2 C3 GQP doub 141 n y 
C5 C4 GQP doub 142 n y 
C5 N1 GQP sing 143 n y 
C3 C4 GQP sing 144 n y 
C4 N2 GQP sing 145 n y 
C11 C10 GQP doub 146 n y 
C11 C12 GQP sing 147 n y 
N1 C7 GQP doub 148 n y 
C10 C9 GQP sing 149 n y 
F1 C12 GQP sing 150 n n 
C12 C13 GQP doub 151 n y 
N2 C7 GQP sing 152 n y 
N2 C8 GQP sing 153 n n 
C9 C8 GQP sing 154 n n 
C9 C14 GQP doub 155 n y 
C13 C14 GQP sing 156 n y 
C6 H1 GQP sing 157 n n 
C7 H2 GQP sing 158 n n 
C8 H3 GQP sing 159 n n 
C8 H4 GQP sing 160 n n 
C10 H5 GQP sing 161 n n 
C13 H6 GQP sing 162 n n 
C1 H7 GQP sing 163 n n 
C11 H8 GQP sing 164 n n 
C14 H9 GQP sing 165 n n 
C2 H10 GQP sing 166 n n 
C3 H11 GQP sing 167 n n 
#
_atom_sites.entry_id                     5QHQ 
_atom_sites.fract_transf_matrix[1][1]    0.019808 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019808 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006484 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 EDO A 1 201 1 EDO EDO . 
C 2 EDO A 1 202 2 EDO EDO . 
D 3 GQP A 1 203 1 GQP LIG . 
E 3 GQP A 1 204 2 GQP LIG . 
F 4 HOH A 1 301 18 HOH HOH . 
F 4 HOH A 2 302 56 HOH HOH . 
F 4 HOH A 3 303 42 HOH HOH . 
F 4 HOH A 4 304 61 HOH HOH . 
F 4 HOH A 5 305 35 HOH HOH . 
F 4 HOH A 6 306 79 HOH HOH . 
F 4 HOH A 7 307 59 HOH HOH . 
F 4 HOH A 8 308 58 HOH HOH . 
F 4 HOH A 9 309 29 HOH HOH . 
F 4 HOH A 10 310 39 HOH HOH . 
F 4 HOH A 11 311 68 HOH HOH . 
F 4 HOH A 12 312 30 HOH HOH . 
F 4 HOH A 13 313 3 HOH HOH . 
F 4 HOH A 14 314 91 HOH HOH . 
F 4 HOH A 15 315 37 HOH HOH . 
F 4 HOH A 16 316 34 HOH HOH . 
F 4 HOH A 17 317 1 HOH HOH . 
F 4 HOH A 18 318 19 HOH HOH . 
F 4 HOH A 19 319 26 HOH HOH . 
F 4 HOH A 20 320 86 HOH HOH . 
F 4 HOH A 21 321 12 HOH HOH . 
F 4 HOH A 22 322 10 HOH HOH . 
F 4 HOH A 23 323 2 HOH HOH . 
F 4 HOH A 24 324 49 HOH HOH . 
F 4 HOH A 25 325 70 HOH HOH . 
F 4 HOH A 26 326 36 HOH HOH . 
F 4 HOH A 27 327 13 HOH HOH . 
F 4 HOH A 28 328 51 HOH HOH . 
F 4 HOH A 29 329 48 HOH HOH . 
F 4 HOH A 30 330 6 HOH HOH . 
F 4 HOH A 31 331 87 HOH HOH . 
F 4 HOH A 32 332 73 HOH HOH . 
F 4 HOH A 33 333 22 HOH HOH . 
F 4 HOH A 34 334 9 HOH HOH . 
F 4 HOH A 35 335 7 HOH HOH . 
F 4 HOH A 36 336 4 HOH HOH . 
F 4 HOH A 37 337 66 HOH HOH . 
F 4 HOH A 38 338 8 HOH HOH . 
F 4 HOH A 39 339 96 HOH HOH . 
F 4 HOH A 40 340 67 HOH HOH . 
F 4 HOH A 41 341 88 HOH HOH . 
F 4 HOH A 42 342 95 HOH HOH . 
F 4 HOH A 43 343 84 HOH HOH . 
F 4 HOH A 44 344 17 HOH HOH . 
F 4 HOH A 45 345 46 HOH HOH . 
F 4 HOH A 46 346 45 HOH HOH . 
F 4 HOH A 47 347 55 HOH HOH . 
F 4 HOH A 48 348 94 HOH HOH . 
F 4 HOH A 49 349 23 HOH HOH . 
F 4 HOH A 50 350 40 HOH HOH . 
F 4 HOH A 51 351 82 HOH HOH . 
F 4 HOH A 52 352 24 HOH HOH . 
F 4 HOH A 53 353 72 HOH HOH . 
F 4 HOH A 54 354 44 HOH HOH . 
F 4 HOH A 55 355 15 HOH HOH . 
F 4 HOH A 56 356 33 HOH HOH . 
F 4 HOH A 57 357 20 HOH HOH . 
F 4 HOH A 58 358 11 HOH HOH . 
F 4 HOH A 59 359 93 HOH HOH . 
F 4 HOH A 60 360 90 HOH HOH . 
F 4 HOH A 61 361 63 HOH HOH . 
F 4 HOH A 62 362 77 HOH HOH . 
F 4 HOH A 63 363 5 HOH HOH . 
F 4 HOH A 64 364 80 HOH HOH . 
F 4 HOH A 65 365 62 HOH HOH . 
F 4 HOH A 66 366 78 HOH HOH . 
F 4 HOH A 67 367 31 HOH HOH . 
F 4 HOH A 68 368 83 HOH HOH . 
F 4 HOH A 69 369 65 HOH HOH . 
F 4 HOH A 70 370 21 HOH HOH . 
F 4 HOH A 71 371 28 HOH HOH . 
F 4 HOH A 72 372 64 HOH HOH . 
F 4 HOH A 73 373 16 HOH HOH . 
F 4 HOH A 74 374 53 HOH HOH . 
F 4 HOH A 75 375 14 HOH HOH . 
F 4 HOH A 76 376 25 HOH HOH . 
F 4 HOH A 77 377 74 HOH HOH . 
F 4 HOH A 78 378 60 HOH HOH . 
F 4 HOH A 79 379 41 HOH HOH . 
F 4 HOH A 80 380 81 HOH HOH . 
F 4 HOH A 81 381 69 HOH HOH . 
F 4 HOH A 82 382 32 HOH HOH . 
F 4 HOH A 83 383 71 HOH HOH . 
F 4 HOH A 84 384 85 HOH HOH . 
F 4 HOH A 85 385 89 HOH HOH . 
F 4 HOH A 86 386 38 HOH HOH . 
F 4 HOH A 87 387 92 HOH HOH . 
F 4 HOH A 88 388 52 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 GQP . . . D 3 10.407 34.282 71.464 0.52 38.72 ? N1 GQP 203 A 1 
HETATM 2 C C4 GQP . . . D 3 10.876 36.513 71.316 0.52 35.23 ? C4 GQP 203 A 1 
HETATM 3 C C5 GQP . . . D 3 10.081 35.472 70.822 0.52 36.98 ? C5 GQP 203 A 1 
HETATM 4 C C6 GQP . . . D 3 9.134 35.721 69.828 0.52 34.7 ? C6 GQP 203 A 1 
HETATM 5 C C7 GQP . . . D 3 11.369 34.613 72.298 0.52 40.18 ? C7 GQP 203 A 1 
HETATM 6 C C8 GQP . . . D 3 12.738 36.593 73.095 0.52 45.22 ? C8 GQP 203 A 1 
HETATM 7 C C10 GQP . . . D 3 13.704 38.461 71.697 0.52 51.25 ? C10 GQP 203 A 1 
HETATM 8 C C13 GQP . . . D 3 12.565 40.391 73.303 0.52 49.79 ? C13 GQP 203 A 1 
HETATM 9 C C1 GQP . . . D 3 9.014 37.008 69.362 0.52 33.95 ? C1 GQP 203 A 1 
HETATM 10 C C11 GQP . . . D 3 13.893 39.798 71.391 0.52 48.53 ? C11 GQP 203 A 1 
HETATM 11 C C12 GQP . . . D 3 13.319 40.723 72.21 0.52 50.38 ? C12 GQP 203 A 1 
HETATM 12 C C14 GQP . . . D 3 12.39 39.042 73.576 0.52 48.51 ? C14 GQP 203 A 1 
HETATM 13 C C2 GQP . . . D 3 9.802 38.035 69.87 0.52 33.06 ? C2 GQP 203 A 1 
HETATM 14 C C3 GQP . . . D 3 10.752 37.814 70.843 0.52 34.71 ? C3 GQP 203 A 1 
HETATM 15 C C9 GQP . . . D 3 12.952 38.061 72.786 0.52 46.83 ? C9 GQP 203 A 1 
HETATM 16 F F1 GQP . . . D 3 13.503 42.033 71.907 0.52 56.34 ? F1 GQP 203 A 1 
HETATM 17 N N2 GQP . . . D 3 11.714 35.939 72.266 0.52 39.4 ? N2 GQP 203 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           294 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           17 
#