data_5QHV # _model_server_result.job_id uEN6knqAJLQhm963-bcPwQ _model_server_result.datetime_utc '2025-01-10 09:24:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5qhv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1404}' # _entry.id 5QHV # _exptl.entry_id 5QHV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 247.336 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-cyclohexyl-3-(2-pyridin-4-ylethyl)urea _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5QHV _cell.length_a 34.076 _cell.length_b 41.697 _cell.length_c 110.967 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5QHV _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H21 N3 O' _chem_comp.formula_weight 247.336 _chem_comp.id AWP _chem_comp.mon_nstd_flag . _chem_comp.name 1-cyclohexyl-3-(2-pyridin-4-ylethyl)urea _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C1 AWP doub 70 n y C2 N1 AWP sing 71 n y C1 C5 AWP sing 72 n y N1 C3 AWP doub 73 n y O1 C8 AWP doub 74 n n C5 C6 AWP sing 75 n n C5 C4 AWP doub 76 n y C6 C7 AWP sing 77 n n C3 C4 AWP sing 78 n y C8 N3 AWP sing 79 n n C8 N2 AWP sing 80 n n C10 C11 AWP sing 81 n n C10 C9 AWP sing 82 n n N3 C9 AWP sing 83 n n C11 C12 AWP sing 84 n n C7 N2 AWP sing 85 n n C9 C14 AWP sing 86 n n C12 C13 AWP sing 87 n n C14 C13 AWP sing 88 n n N3 H1 AWP sing 89 n n C4 H2 AWP sing 90 n n C6 H3 AWP sing 91 n n C6 H4 AWP sing 92 n n C7 H5 AWP sing 93 n n C7 H6 AWP sing 94 n n C10 H7 AWP sing 95 n n C10 H8 AWP sing 96 n n C13 H9 AWP sing 97 n n C13 H10 AWP sing 98 n n C1 H11 AWP sing 99 n n C2 H12 AWP sing 100 n n C3 H13 AWP sing 101 n n N2 H14 AWP sing 102 n n C9 H15 AWP sing 103 n n C11 H16 AWP sing 104 n n C11 H17 AWP sing 105 n n C12 H18 AWP sing 106 n n C12 H19 AWP sing 107 n n C14 H20 AWP sing 108 n n C14 H21 AWP sing 109 n n # _atom_sites.entry_id 5QHV _atom_sites.fract_transf_matrix[1][1] 0.029346 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023983 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009012 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 1401 1 CL CL . C 2 CL A 1 1402 3 CL CL . D 3 DMS A 1 1403 1 DMS DMS . E 4 AWP A 1 1404 1 AWP LIG . F 5 HOH A 1 1501 226 HOH HOH . F 5 HOH A 2 1502 195 HOH HOH . F 5 HOH A 3 1503 215 HOH HOH . F 5 HOH A 4 1504 80 HOH HOH . F 5 HOH A 5 1505 86 HOH HOH . F 5 HOH A 6 1506 189 HOH HOH . F 5 HOH A 7 1507 83 HOH HOH . F 5 HOH A 8 1508 139 HOH HOH . F 5 HOH A 9 1509 39 HOH HOH . F 5 HOH A 10 1510 196 HOH HOH . F 5 HOH A 11 1511 158 HOH HOH . F 5 HOH A 12 1512 164 HOH HOH . F 5 HOH A 13 1513 199 HOH HOH . F 5 HOH A 14 1514 16 HOH HOH . F 5 HOH A 15 1515 18 HOH HOH . F 5 HOH A 16 1516 17 HOH HOH . F 5 HOH A 17 1517 127 HOH HOH . F 5 HOH A 18 1518 173 HOH HOH . F 5 HOH A 19 1519 204 HOH HOH . F 5 HOH A 20 1520 135 HOH HOH . F 5 HOH A 21 1521 23 HOH HOH . F 5 HOH A 22 1522 20 HOH HOH . F 5 HOH A 23 1523 188 HOH HOH . F 5 HOH A 24 1524 79 HOH HOH . F 5 HOH A 25 1525 56 HOH HOH . F 5 HOH A 26 1526 72 HOH HOH . F 5 HOH A 27 1527 200 HOH HOH . F 5 HOH A 28 1528 46 HOH HOH . F 5 HOH A 29 1529 14 HOH HOH . F 5 HOH A 30 1530 58 HOH HOH . F 5 HOH A 31 1531 81 HOH HOH . F 5 HOH A 32 1532 21 HOH HOH . F 5 HOH A 33 1533 28 HOH HOH . F 5 HOH A 34 1534 25 HOH HOH . F 5 HOH A 35 1535 152 HOH HOH . F 5 HOH A 36 1536 42 HOH HOH . F 5 HOH A 37 1537 34 HOH HOH . F 5 HOH A 38 1538 216 HOH HOH . F 5 HOH A 39 1539 151 HOH HOH . F 5 HOH A 40 1540 15 HOH HOH . F 5 HOH A 41 1541 19 HOH HOH . F 5 HOH A 42 1542 55 HOH HOH . F 5 HOH A 43 1543 95 HOH HOH . F 5 HOH A 44 1544 197 HOH HOH . F 5 HOH A 45 1545 47 HOH HOH . F 5 HOH A 46 1546 144 HOH HOH . F 5 HOH A 47 1547 178 HOH HOH . F 5 HOH A 48 1548 116 HOH HOH . F 5 HOH A 49 1549 177 HOH HOH . F 5 HOH A 50 1550 53 HOH HOH . F 5 HOH A 51 1551 103 HOH HOH . F 5 HOH A 52 1552 64 HOH HOH . F 5 HOH A 53 1553 84 HOH HOH . F 5 HOH A 54 1554 150 HOH HOH . F 5 HOH A 55 1555 123 HOH HOH . F 5 HOH A 56 1556 126 HOH HOH . F 5 HOH A 57 1557 182 HOH HOH . F 5 HOH A 58 1558 100 HOH HOH . F 5 HOH A 59 1559 49 HOH HOH . F 5 HOH A 60 1560 67 HOH HOH . F 5 HOH A 61 1561 73 HOH HOH . F 5 HOH A 62 1562 217 HOH HOH . F 5 HOH A 63 1563 155 HOH HOH . F 5 HOH A 64 1564 134 HOH HOH . F 5 HOH A 65 1565 85 HOH HOH . F 5 HOH A 66 1566 22 HOH HOH . F 5 HOH A 67 1567 104 HOH HOH . F 5 HOH A 68 1568 27 HOH HOH . F 5 HOH A 69 1569 4 HOH HOH . F 5 HOH A 70 1570 168 HOH HOH . F 5 HOH A 71 1571 30 HOH HOH . F 5 HOH A 72 1572 105 HOH HOH . F 5 HOH A 73 1573 62 HOH HOH . F 5 HOH A 74 1574 68 HOH HOH . F 5 HOH A 75 1575 63 HOH HOH . F 5 HOH A 76 1576 147 HOH HOH . F 5 HOH A 77 1577 213 HOH HOH . F 5 HOH A 78 1578 44 HOH HOH . F 5 HOH A 79 1579 186 HOH HOH . F 5 HOH A 80 1580 175 HOH HOH . F 5 HOH A 81 1581 137 HOH HOH . F 5 HOH A 82 1582 31 HOH HOH . F 5 HOH A 83 1583 45 HOH HOH . F 5 HOH A 84 1584 75 HOH HOH . F 5 HOH A 85 1585 161 HOH HOH . F 5 HOH A 86 1586 148 HOH HOH . F 5 HOH A 87 1587 29 HOH HOH . F 5 HOH A 88 1588 202 HOH HOH . F 5 HOH A 89 1589 154 HOH HOH . F 5 HOH A 90 1590 51 HOH HOH . F 5 HOH A 91 1591 54 HOH HOH . F 5 HOH A 92 1592 57 HOH HOH . F 5 HOH A 93 1593 169 HOH HOH . F 5 HOH A 94 1594 145 HOH HOH . F 5 HOH A 95 1595 183 HOH HOH . F 5 HOH A 96 1596 70 HOH HOH . F 5 HOH A 97 1597 140 HOH HOH . F 5 HOH A 98 1598 41 HOH HOH . F 5 HOH A 99 1599 108 HOH HOH . F 5 HOH A 100 1600 212 HOH HOH . F 5 HOH A 101 1601 167 HOH HOH . F 5 HOH A 102 1602 78 HOH HOH . F 5 HOH A 103 1603 106 HOH HOH . F 5 HOH A 104 1604 193 HOH HOH . F 5 HOH A 105 1605 48 HOH HOH . F 5 HOH A 106 1606 114 HOH HOH . F 5 HOH A 107 1607 35 HOH HOH . F 5 HOH A 108 1608 52 HOH HOH . F 5 HOH A 109 1609 208 HOH HOH . F 5 HOH A 110 1610 13 HOH HOH . F 5 HOH A 111 1611 113 HOH HOH . F 5 HOH A 112 1612 60 HOH HOH . F 5 HOH A 113 1613 198 HOH HOH . F 5 HOH A 114 1614 110 HOH HOH . F 5 HOH A 115 1615 98 HOH HOH . F 5 HOH A 116 1616 221 HOH HOH . F 5 HOH A 117 1617 133 HOH HOH . F 5 HOH A 118 1618 107 HOH HOH . F 5 HOH A 119 1619 40 HOH HOH . F 5 HOH A 120 1620 65 HOH HOH . F 5 HOH A 121 1621 141 HOH HOH . F 5 HOH A 122 1622 33 HOH HOH . F 5 HOH A 123 1623 223 HOH HOH . F 5 HOH A 124 1624 142 HOH HOH . F 5 HOH A 125 1625 115 HOH HOH . F 5 HOH A 126 1626 192 HOH HOH . F 5 HOH A 127 1627 143 HOH HOH . F 5 HOH A 128 1628 38 HOH HOH . F 5 HOH A 129 1629 32 HOH HOH . F 5 HOH A 130 1630 71 HOH HOH . F 5 HOH A 131 1631 117 HOH HOH . F 5 HOH A 132 1632 26 HOH HOH . F 5 HOH A 133 1633 74 HOH HOH . F 5 HOH A 134 1634 210 HOH HOH . F 5 HOH A 135 1635 136 HOH HOH . F 5 HOH A 136 1636 69 HOH HOH . F 5 HOH A 137 1637 146 HOH HOH . F 5 HOH A 138 1638 109 HOH HOH . F 5 HOH A 139 1639 37 HOH HOH . F 5 HOH A 140 1640 96 HOH HOH . F 5 HOH A 141 1641 59 HOH HOH . F 5 HOH A 142 1642 77 HOH HOH . F 5 HOH A 143 1643 163 HOH HOH . F 5 HOH A 144 1644 1 HOH HOH . F 5 HOH A 145 1645 149 HOH HOH . F 5 HOH A 146 1646 94 HOH HOH . F 5 HOH A 147 1647 36 HOH HOH . F 5 HOH A 148 1648 93 HOH HOH . F 5 HOH A 149 1649 166 HOH HOH . F 5 HOH A 150 1650 91 HOH HOH . F 5 HOH A 151 1651 111 HOH HOH . F 5 HOH A 152 1652 203 HOH HOH . F 5 HOH A 153 1653 190 HOH HOH . F 5 HOH A 154 1654 209 HOH HOH . F 5 HOH A 155 1655 201 HOH HOH . F 5 HOH A 156 1656 165 HOH HOH . F 5 HOH A 157 1657 119 HOH HOH . F 5 HOH A 158 1658 138 HOH HOH . F 5 HOH A 159 1659 157 HOH HOH . F 5 HOH A 160 1660 128 HOH HOH . F 5 HOH A 161 1661 225 HOH HOH . F 5 HOH A 162 1662 24 HOH HOH . F 5 HOH A 163 1663 102 HOH HOH . F 5 HOH A 164 1664 130 HOH HOH . F 5 HOH A 165 1665 207 HOH HOH . F 5 HOH A 166 1666 224 HOH HOH . F 5 HOH A 167 1667 92 HOH HOH . F 5 HOH A 168 1668 7 HOH HOH . F 5 HOH A 169 1669 82 HOH HOH . F 5 HOH A 170 1670 88 HOH HOH . F 5 HOH A 171 1671 162 HOH HOH . F 5 HOH A 172 1672 97 HOH HOH . F 5 HOH A 173 1673 101 HOH HOH . F 5 HOH A 174 1674 9 HOH HOH . F 5 HOH A 175 1675 61 HOH HOH . F 5 HOH A 176 1676 219 HOH HOH . F 5 HOH A 177 1677 3 HOH HOH . F 5 HOH A 178 1678 214 HOH HOH . F 5 HOH A 179 1679 90 HOH HOH . F 5 HOH A 180 1680 6 HOH HOH . F 5 HOH A 181 1681 206 HOH HOH . F 5 HOH A 182 1682 121 HOH HOH . F 5 HOH A 183 1683 5 HOH HOH . F 5 HOH A 184 1684 132 HOH HOH . F 5 HOH A 185 1685 179 HOH HOH . F 5 HOH A 186 1686 125 HOH HOH . F 5 HOH A 187 1687 211 HOH HOH . F 5 HOH A 188 1688 50 HOH HOH . F 5 HOH A 189 1689 194 HOH HOH . F 5 HOH A 190 1690 220 HOH HOH . F 5 HOH A 191 1691 12 HOH HOH . F 5 HOH A 192 1692 2 HOH HOH . F 5 HOH A 193 1693 222 HOH HOH . F 5 HOH A 194 1694 11 HOH HOH . F 5 HOH A 195 1695 8 HOH HOH . F 5 HOH A 196 1696 205 HOH HOH . F 5 HOH A 197 1697 10 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 AWP . . . E 4 16.546 22.615 21.839 0.63 14.99 ? N1 AWP 1404 A 1 HETATM 2 N N3 AWP . . . E 4 19.282 18.569 26.51 0.63 13.43 ? N3 AWP 1404 A 1 HETATM 3 C C4 AWP . . . E 4 14.835 21.459 23.048 0.63 14.76 ? C4 AWP 1404 A 1 HETATM 4 C C5 AWP . . . E 4 15.681 21.203 24.116 0.63 14.53 ? C5 AWP 1404 A 1 HETATM 5 C C6 AWP . . . E 4 15.181 20.436 25.324 0.63 14.29 ? C6 AWP 1404 A 1 HETATM 6 C C7 AWP . . . E 4 16.129 20.395 26.509 0.63 13.99 ? C7 AWP 1404 A 1 HETATM 7 C C8 AWP . . . E 4 18.468 19.63 26.651 0.63 13.5 ? C8 AWP 1404 A 1 HETATM 8 C C10 AWP . . . E 4 21.489 19.108 25.577 0.63 13.61 ? C10 AWP 1404 A 1 HETATM 9 C C13 AWP . . . E 4 22.732 17.343 27.561 0.63 13.66 ? C13 AWP 1404 A 1 HETATM 10 C C1 AWP . . . E 4 16.982 21.676 23.999 0.63 14.7 ? C1 AWP 1404 A 1 HETATM 11 C C2 AWP . . . E 4 17.362 22.371 22.864 0.63 14.85 ? C2 AWP 1404 A 1 HETATM 12 C C3 AWP . . . E 4 15.3 22.154 21.948 0.63 14.93 ? C3 AWP 1404 A 1 HETATM 13 N N2 AWP . . . E 4 17.173 19.392 26.353 0.63 13.7 ? N2 AWP 1404 A 1 HETATM 14 O O1 AWP . . . E 4 18.871 20.731 27.023 0.63 13.42 ? O1 AWP 1404 A 1 HETATM 15 C C9 AWP . . . E 4 20.719 18.625 26.793 0.63 13.51 ? C9 AWP 1404 A 1 HETATM 16 C C11 AWP . . . E 4 22.984 19.185 25.879 0.63 13.7 ? C11 AWP 1404 A 1 HETATM 17 C C12 AWP . . . E 4 23.522 17.852 26.37 0.63 13.73 ? C12 AWP 1404 A 1 HETATM 18 C C14 AWP . . . E 4 21.237 17.274 27.254 0.63 13.64 ? C14 AWP 1404 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 441 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 18 #