data_5QHZ # _model_server_result.job_id 4ULoP1LhumTQ8FsZQnsdNg _model_server_result.datetime_utc '2024-11-12 20:38:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5qhz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1405}' # _entry.id 5QHZ # _exptl.entry_id 5QHZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 166.22 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-cyano-~{N}-cyclohexyl-ethanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5QHZ _cell.length_a 34.399 _cell.length_b 41.583 _cell.length_c 111.38 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5QHZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C9 H14 N2 O' _chem_comp.formula_weight 166.22 _chem_comp.id GT7 _chem_comp.mon_nstd_flag . _chem_comp.name 2-cyano-~{N}-cyclohexyl-ethanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N2 C9 GT7 trip 138 n n C9 C8 GT7 sing 139 n n O1 C7 GT7 doub 140 n n C8 C7 GT7 sing 141 n n C7 N1 GT7 sing 142 n n N1 C4 GT7 sing 143 n n C3 C4 GT7 sing 144 n n C3 C2 GT7 sing 145 n n C4 C5 GT7 sing 146 n n C2 C1 GT7 sing 147 n n C5 C6 GT7 sing 148 n n C1 C6 GT7 sing 149 n n N1 H1 GT7 sing 150 n n C4 H2 GT7 sing 151 n n C5 H3 GT7 sing 152 n n C5 H4 GT7 sing 153 n n C6 H5 GT7 sing 154 n n C6 H6 GT7 sing 155 n n C8 H7 GT7 sing 156 n n C8 H8 GT7 sing 157 n n C1 H9 GT7 sing 158 n n C1 H10 GT7 sing 159 n n C2 H11 GT7 sing 160 n n C2 H12 GT7 sing 161 n n C3 H13 GT7 sing 162 n n C3 H14 GT7 sing 163 n n # _atom_sites.entry_id 5QHZ _atom_sites.fract_transf_matrix[1][1] 0.029071 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024048 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008978 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 1401 1 CL CL . C 2 CL A 1 1402 2 CL CL . D 3 DMS A 1 1403 1 DMS DMS . E 3 DMS A 1 1404 2 DMS DMS . F 4 GT7 A 1 1405 1 GT7 LIG . G 5 HOH A 1 1501 195 HOH HOH . G 5 HOH A 2 1502 53 HOH HOH . G 5 HOH A 3 1503 192 HOH HOH . G 5 HOH A 4 1504 34 HOH HOH . G 5 HOH A 5 1505 189 HOH HOH . G 5 HOH A 6 1506 17 HOH HOH . G 5 HOH A 7 1507 39 HOH HOH . G 5 HOH A 8 1508 15 HOH HOH . G 5 HOH A 9 1509 28 HOH HOH . G 5 HOH A 10 1510 230 HOH HOH . G 5 HOH A 11 1511 158 HOH HOH . G 5 HOH A 12 1512 207 HOH HOH . G 5 HOH A 13 1513 16 HOH HOH . G 5 HOH A 14 1514 83 HOH HOH . G 5 HOH A 15 1515 112 HOH HOH . G 5 HOH A 16 1516 23 HOH HOH . G 5 HOH A 17 1517 265 HOH HOH . G 5 HOH A 18 1518 149 HOH HOH . G 5 HOH A 19 1519 208 HOH HOH . G 5 HOH A 20 1520 257 HOH HOH . G 5 HOH A 21 1521 40 HOH HOH . G 5 HOH A 22 1522 211 HOH HOH . G 5 HOH A 23 1523 248 HOH HOH . G 5 HOH A 24 1524 203 HOH HOH . G 5 HOH A 25 1525 272 HOH HOH . G 5 HOH A 26 1526 79 HOH HOH . G 5 HOH A 27 1527 86 HOH HOH . G 5 HOH A 28 1528 269 HOH HOH . G 5 HOH A 29 1529 226 HOH HOH . G 5 HOH A 30 1530 44 HOH HOH . G 5 HOH A 31 1531 216 HOH HOH . G 5 HOH A 32 1532 46 HOH HOH . G 5 HOH A 33 1533 240 HOH HOH . G 5 HOH A 34 1534 127 HOH HOH . G 5 HOH A 35 1535 100 HOH HOH . G 5 HOH A 36 1536 150 HOH HOH . G 5 HOH A 37 1537 42 HOH HOH . G 5 HOH A 38 1538 25 HOH HOH . G 5 HOH A 39 1539 168 HOH HOH . G 5 HOH A 40 1540 55 HOH HOH . G 5 HOH A 41 1541 177 HOH HOH . G 5 HOH A 42 1542 258 HOH HOH . G 5 HOH A 43 1543 58 HOH HOH . G 5 HOH A 44 1544 245 HOH HOH . G 5 HOH A 45 1545 164 HOH HOH . G 5 HOH A 46 1546 47 HOH HOH . G 5 HOH A 47 1547 62 HOH HOH . G 5 HOH A 48 1548 107 HOH HOH . G 5 HOH A 49 1549 259 HOH HOH . G 5 HOH A 50 1550 56 HOH HOH . G 5 HOH A 51 1551 14 HOH HOH . G 5 HOH A 52 1552 161 HOH HOH . G 5 HOH A 53 1553 103 HOH HOH . G 5 HOH A 54 1554 19 HOH HOH . G 5 HOH A 55 1555 178 HOH HOH . G 5 HOH A 56 1556 252 HOH HOH . G 5 HOH A 57 1557 81 HOH HOH . G 5 HOH A 58 1558 21 HOH HOH . G 5 HOH A 59 1559 173 HOH HOH . G 5 HOH A 60 1560 64 HOH HOH . G 5 HOH A 61 1561 75 HOH HOH . G 5 HOH A 62 1562 73 HOH HOH . G 5 HOH A 63 1563 155 HOH HOH . G 5 HOH A 64 1564 18 HOH HOH . G 5 HOH A 65 1565 71 HOH HOH . G 5 HOH A 66 1566 67 HOH HOH . G 5 HOH A 67 1567 54 HOH HOH . G 5 HOH A 68 1568 84 HOH HOH . G 5 HOH A 69 1569 174 HOH HOH . G 5 HOH A 70 1570 68 HOH HOH . G 5 HOH A 71 1571 60 HOH HOH . G 5 HOH A 72 1572 105 HOH HOH . G 5 HOH A 73 1573 63 HOH HOH . G 5 HOH A 74 1574 167 HOH HOH . G 5 HOH A 75 1575 32 HOH HOH . G 5 HOH A 76 1576 172 HOH HOH . G 5 HOH A 77 1577 221 HOH HOH . G 5 HOH A 78 1578 136 HOH HOH . G 5 HOH A 79 1579 27 HOH HOH . G 5 HOH A 80 1580 154 HOH HOH . G 5 HOH A 81 1581 31 HOH HOH . G 5 HOH A 82 1582 267 HOH HOH . G 5 HOH A 83 1583 22 HOH HOH . G 5 HOH A 84 1584 144 HOH HOH . G 5 HOH A 85 1585 45 HOH HOH . G 5 HOH A 86 1586 29 HOH HOH . G 5 HOH A 87 1587 49 HOH HOH . G 5 HOH A 88 1588 104 HOH HOH . G 5 HOH A 89 1589 147 HOH HOH . G 5 HOH A 90 1590 85 HOH HOH . G 5 HOH A 91 1591 57 HOH HOH . G 5 HOH A 92 1592 250 HOH HOH . G 5 HOH A 93 1593 106 HOH HOH . G 5 HOH A 94 1594 228 HOH HOH . G 5 HOH A 95 1595 140 HOH HOH . G 5 HOH A 96 1596 70 HOH HOH . G 5 HOH A 97 1597 145 HOH HOH . G 5 HOH A 98 1598 113 HOH HOH . G 5 HOH A 99 1599 48 HOH HOH . G 5 HOH A 100 1600 30 HOH HOH . G 5 HOH A 101 1601 142 HOH HOH . G 5 HOH A 102 1602 193 HOH HOH . G 5 HOH A 103 1603 210 HOH HOH . G 5 HOH A 104 1604 51 HOH HOH . G 5 HOH A 105 1605 95 HOH HOH . G 5 HOH A 106 1606 120 HOH HOH . G 5 HOH A 107 1607 65 HOH HOH . G 5 HOH A 108 1608 37 HOH HOH . G 5 HOH A 109 1609 115 HOH HOH . G 5 HOH A 110 1610 108 HOH HOH . G 5 HOH A 111 1611 13 HOH HOH . G 5 HOH A 112 1612 249 HOH HOH . G 5 HOH A 113 1613 170 HOH HOH . G 5 HOH A 114 1614 117 HOH HOH . G 5 HOH A 115 1615 262 HOH HOH . G 5 HOH A 116 1616 278 HOH HOH . G 5 HOH A 117 1617 148 HOH HOH . G 5 HOH A 118 1618 74 HOH HOH . G 5 HOH A 119 1619 72 HOH HOH . G 5 HOH A 120 1620 78 HOH HOH . G 5 HOH A 121 1621 52 HOH HOH . G 5 HOH A 122 1622 35 HOH HOH . G 5 HOH A 123 1623 134 HOH HOH . G 5 HOH A 124 1624 110 HOH HOH . G 5 HOH A 125 1625 215 HOH HOH . G 5 HOH A 126 1626 96 HOH HOH . G 5 HOH A 127 1627 157 HOH HOH . G 5 HOH A 128 1628 141 HOH HOH . G 5 HOH A 129 1629 26 HOH HOH . G 5 HOH A 130 1630 135 HOH HOH . G 5 HOH A 131 1631 24 HOH HOH . G 5 HOH A 132 1632 253 HOH HOH . G 5 HOH A 133 1633 146 HOH HOH . G 5 HOH A 134 1634 41 HOH HOH . G 5 HOH A 135 1635 94 HOH HOH . G 5 HOH A 136 1636 153 HOH HOH . G 5 HOH A 137 1637 69 HOH HOH . G 5 HOH A 138 1638 90 HOH HOH . G 5 HOH A 139 1639 264 HOH HOH . G 5 HOH A 140 1640 190 HOH HOH . G 5 HOH A 141 1641 101 HOH HOH . G 5 HOH A 142 1642 143 HOH HOH . G 5 HOH A 143 1643 109 HOH HOH . G 5 HOH A 144 1644 59 HOH HOH . G 5 HOH A 145 1645 163 HOH HOH . G 5 HOH A 146 1646 128 HOH HOH . G 5 HOH A 147 1647 33 HOH HOH . G 5 HOH A 148 1648 36 HOH HOH . G 5 HOH A 149 1649 237 HOH HOH . G 5 HOH A 150 1650 20 HOH HOH . G 5 HOH A 151 1651 162 HOH HOH . G 5 HOH A 152 1652 77 HOH HOH . G 5 HOH A 153 1653 255 HOH HOH . G 5 HOH A 154 1654 239 HOH HOH . G 5 HOH A 155 1655 236 HOH HOH . G 5 HOH A 156 1656 92 HOH HOH . G 5 HOH A 157 1657 133 HOH HOH . G 5 HOH A 158 1658 209 HOH HOH . G 5 HOH A 159 1659 241 HOH HOH . G 5 HOH A 160 1660 246 HOH HOH . G 5 HOH A 161 1661 111 HOH HOH . G 5 HOH A 162 1662 82 HOH HOH . G 5 HOH A 163 1663 225 HOH HOH . G 5 HOH A 164 1664 88 HOH HOH . G 5 HOH A 165 1665 97 HOH HOH . G 5 HOH A 166 1666 234 HOH HOH . G 5 HOH A 167 1667 7 HOH HOH . G 5 HOH A 168 1668 214 HOH HOH . G 5 HOH A 169 1669 238 HOH HOH . G 5 HOH A 170 1670 247 HOH HOH . G 5 HOH A 171 1671 220 HOH HOH . G 5 HOH A 172 1672 235 HOH HOH . G 5 HOH A 173 1673 243 HOH HOH . G 5 HOH A 174 1674 102 HOH HOH . G 5 HOH A 175 1675 244 HOH HOH . G 5 HOH A 176 1676 119 HOH HOH . G 5 HOH A 177 1677 217 HOH HOH . G 5 HOH A 178 1678 187 HOH HOH . G 5 HOH A 179 1679 270 HOH HOH . G 5 HOH A 180 1680 160 HOH HOH . G 5 HOH A 181 1681 274 HOH HOH . G 5 HOH A 182 1682 261 HOH HOH . G 5 HOH A 183 1683 1 HOH HOH . G 5 HOH A 184 1684 233 HOH HOH . G 5 HOH A 185 1685 156 HOH HOH . G 5 HOH A 186 1686 5 HOH HOH . G 5 HOH A 187 1687 232 HOH HOH . G 5 HOH A 188 1688 6 HOH HOH . G 5 HOH A 189 1689 99 HOH HOH . G 5 HOH A 190 1690 132 HOH HOH . G 5 HOH A 191 1691 179 HOH HOH . G 5 HOH A 192 1692 43 HOH HOH . G 5 HOH A 193 1693 125 HOH HOH . G 5 HOH A 194 1694 91 HOH HOH . G 5 HOH A 195 1695 50 HOH HOH . G 5 HOH A 196 1696 130 HOH HOH . G 5 HOH A 197 1697 276 HOH HOH . G 5 HOH A 198 1698 123 HOH HOH . G 5 HOH A 199 1699 139 HOH HOH . G 5 HOH A 200 1700 93 HOH HOH . G 5 HOH A 201 1701 194 HOH HOH . G 5 HOH A 202 1702 254 HOH HOH . G 5 HOH A 203 1703 222 HOH HOH . G 5 HOH A 204 1704 268 HOH HOH . G 5 HOH A 205 1705 242 HOH HOH . G 5 HOH A 206 1706 183 HOH HOH . G 5 HOH A 207 1707 229 HOH HOH . G 5 HOH A 208 1708 206 HOH HOH . G 5 HOH A 209 1709 213 HOH HOH . G 5 HOH A 210 1710 2 HOH HOH . G 5 HOH A 211 1711 256 HOH HOH . G 5 HOH A 212 1712 212 HOH HOH . G 5 HOH A 213 1713 12 HOH HOH . G 5 HOH A 214 1714 8 HOH HOH . G 5 HOH A 215 1715 80 HOH HOH . G 5 HOH A 216 1716 231 HOH HOH . G 5 HOH A 217 1717 224 HOH HOH . G 5 HOH A 218 1718 11 HOH HOH . G 5 HOH A 219 1719 277 HOH HOH . G 5 HOH A 220 1720 273 HOH HOH . G 5 HOH A 221 1721 9 HOH HOH . G 5 HOH A 222 1722 191 HOH HOH . G 5 HOH A 223 1723 227 HOH HOH . G 5 HOH A 224 1724 279 HOH HOH . G 5 HOH A 225 1725 186 HOH HOH . G 5 HOH A 226 1726 165 HOH HOH . G 5 HOH A 227 1727 182 HOH HOH . G 5 HOH A 228 1728 175 HOH HOH . G 5 HOH A 229 1729 271 HOH HOH . G 5 HOH A 230 1730 251 HOH HOH . G 5 HOH A 231 1731 124 HOH HOH . G 5 HOH A 232 1732 275 HOH HOH . G 5 HOH A 233 1733 199 HOH HOH . G 5 HOH A 234 1734 200 HOH HOH . G 5 HOH A 235 1735 219 HOH HOH . G 5 HOH A 236 1736 202 HOH HOH . G 5 HOH A 237 1737 201 HOH HOH . G 5 HOH A 238 1738 197 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 GT7 . . . F 4 22.854 24.094 24 0.81 9.37 ? N1 GT7 1405 A 1 HETATM 2 C C4 GT7 . . . F 4 22.128 23.092 24.786 0.81 10.08 ? C4 GT7 1405 A 1 HETATM 3 C C5 GT7 . . . F 4 22.342 23.349 26.276 0.81 11.1 ? C5 GT7 1405 A 1 HETATM 4 C C6 GT7 . . . F 4 21.615 22.324 27.143 0.81 12.73 ? C6 GT7 1405 A 1 HETATM 5 C C7 GT7 . . . F 4 23.292 23.938 22.737 0.81 8.87 ? C7 GT7 1405 A 1 HETATM 6 C C8 GT7 . . . F 4 24.009 25.15 22.172 0.81 8.69 ? C8 GT7 1405 A 1 HETATM 7 C C1 GT7 . . . F 4 20.135 22.333 26.846 0.81 12.98 ? C1 GT7 1405 A 1 HETATM 8 C C2 GT7 . . . F 4 19.881 22.103 25.369 0.81 12.58 ? C2 GT7 1405 A 1 HETATM 9 C C3 GT7 . . . F 4 20.643 23.08 24.469 0.81 10.7 ? C3 GT7 1405 A 1 HETATM 10 O O1 GT7 . . . F 4 23.156 22.893 22.077 0.81 9.2 ? O1 GT7 1405 A 1 HETATM 11 C C9 GT7 . . . F 4 24.325 24.982 20.762 0.81 11.29 ? C9 GT7 1405 A 1 HETATM 12 N N2 GT7 . . . F 4 24.506 24.864 19.629 0.81 14.18 ? N2 GT7 1405 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 341 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #