data_5QIC # _model_server_result.job_id q_dRVAPBP0HqtqH2eswxNA _model_server_result.datetime_utc '2025-02-24 18:56:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5qic # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 5QIC # _exptl.entry_id 5QIC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 248.296 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description cyclopropyl-[4-(4-fluorophenyl)piperazin-1-yl]methanone _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5QIC _cell.length_a 97.59 _cell.length_b 97.59 _cell.length_c 80.87 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5QIC _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H17 F N2 O' _chem_comp.formula_weight 248.296 _chem_comp.id GX4 _chem_comp.mon_nstd_flag . _chem_comp.name cyclopropyl-[4-(4-fluorophenyl)piperazin-1-yl]methanone _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 GX4 doub 183 n y C1 C GX4 sing 184 n y C2 C3 GX4 sing 185 n y F C GX4 sing 186 n n C C5 GX4 doub 187 n y C6 C7 GX4 sing 188 n n C6 N GX4 sing 189 n n C3 N GX4 sing 190 n n C3 C4 GX4 doub 191 n y C7 N1 GX4 sing 192 n n C5 C4 GX4 sing 193 n y N C9 GX4 sing 194 n n O C10 GX4 doub 195 n n N1 C10 GX4 sing 196 n n N1 C8 GX4 sing 197 n n C9 C8 GX4 sing 198 n n C10 C11 GX4 sing 199 n n C11 C13 GX4 sing 200 n n C11 C12 GX4 sing 201 n n C13 C12 GX4 sing 202 n n C4 H1 GX4 sing 203 n n C5 H2 GX4 sing 204 n n C6 H3 GX4 sing 205 n n C6 H4 GX4 sing 206 n n C7 H5 GX4 sing 207 n n C7 H6 GX4 sing 208 n n C8 H7 GX4 sing 209 n n C8 H8 GX4 sing 210 n n C13 H9 GX4 sing 211 n n C13 H10 GX4 sing 212 n n C11 H11 GX4 sing 213 n n C12 H12 GX4 sing 214 n n C12 H13 GX4 sing 215 n n C9 H14 GX4 sing 216 n n C9 H15 GX4 sing 217 n n C2 H16 GX4 sing 218 n n C1 H17 GX4 sing 219 n n # _atom_sites.entry_id 5QIC _atom_sites.fract_transf_matrix[1][1] 0.010247 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010247 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012366 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMN A 1 401 1 FMN FMN . C 3 GX4 A 1 402 1 GX4 LIG . D 4 HOH A 1 501 91 HOH HOH . D 4 HOH A 2 502 47 HOH HOH . D 4 HOH A 3 503 71 HOH HOH . D 4 HOH A 4 504 29 HOH HOH . D 4 HOH A 5 505 21 HOH HOH . D 4 HOH A 6 506 35 HOH HOH . D 4 HOH A 7 507 26 HOH HOH . D 4 HOH A 8 508 98 HOH HOH . D 4 HOH A 9 509 122 HOH HOH . D 4 HOH A 10 510 33 HOH HOH . D 4 HOH A 11 511 65 HOH HOH . D 4 HOH A 12 512 112 HOH HOH . D 4 HOH A 13 513 36 HOH HOH . D 4 HOH A 14 514 2 HOH HOH . D 4 HOH A 15 515 27 HOH HOH . D 4 HOH A 16 516 56 HOH HOH . D 4 HOH A 17 517 99 HOH HOH . D 4 HOH A 18 518 68 HOH HOH . D 4 HOH A 19 519 15 HOH HOH . D 4 HOH A 20 520 80 HOH HOH . D 4 HOH A 21 521 55 HOH HOH . D 4 HOH A 22 522 60 HOH HOH . D 4 HOH A 23 523 14 HOH HOH . D 4 HOH A 24 524 40 HOH HOH . D 4 HOH A 25 525 9 HOH HOH . D 4 HOH A 26 526 34 HOH HOH . D 4 HOH A 27 527 54 HOH HOH . D 4 HOH A 28 528 19 HOH HOH . D 4 HOH A 29 529 87 HOH HOH . D 4 HOH A 30 530 43 HOH HOH . D 4 HOH A 31 531 134 HOH HOH . D 4 HOH A 32 532 128 HOH HOH . D 4 HOH A 33 533 10 HOH HOH . D 4 HOH A 34 534 46 HOH HOH . D 4 HOH A 35 535 24 HOH HOH . D 4 HOH A 36 536 126 HOH HOH . D 4 HOH A 37 537 75 HOH HOH . D 4 HOH A 38 538 32 HOH HOH . D 4 HOH A 39 539 110 HOH HOH . D 4 HOH A 40 540 89 HOH HOH . D 4 HOH A 41 541 97 HOH HOH . D 4 HOH A 42 542 28 HOH HOH . D 4 HOH A 43 543 17 HOH HOH . D 4 HOH A 44 544 132 HOH HOH . D 4 HOH A 45 545 90 HOH HOH . D 4 HOH A 46 546 25 HOH HOH . D 4 HOH A 47 547 113 HOH HOH . D 4 HOH A 48 548 11 HOH HOH . D 4 HOH A 49 549 1 HOH HOH . D 4 HOH A 50 550 77 HOH HOH . D 4 HOH A 51 551 37 HOH HOH . D 4 HOH A 52 552 48 HOH HOH . D 4 HOH A 53 553 5 HOH HOH . D 4 HOH A 54 554 61 HOH HOH . D 4 HOH A 55 555 51 HOH HOH . D 4 HOH A 56 556 125 HOH HOH . D 4 HOH A 57 557 20 HOH HOH . D 4 HOH A 58 558 7 HOH HOH . D 4 HOH A 59 559 95 HOH HOH . D 4 HOH A 60 560 106 HOH HOH . D 4 HOH A 61 561 38 HOH HOH . D 4 HOH A 62 562 50 HOH HOH . D 4 HOH A 63 563 118 HOH HOH . D 4 HOH A 64 564 86 HOH HOH . D 4 HOH A 65 565 78 HOH HOH . D 4 HOH A 66 566 58 HOH HOH . D 4 HOH A 67 567 4 HOH HOH . D 4 HOH A 68 568 124 HOH HOH . D 4 HOH A 69 569 111 HOH HOH . D 4 HOH A 70 570 49 HOH HOH . D 4 HOH A 71 571 13 HOH HOH . D 4 HOH A 72 572 114 HOH HOH . D 4 HOH A 73 573 70 HOH HOH . D 4 HOH A 74 574 104 HOH HOH . D 4 HOH A 75 575 117 HOH HOH . D 4 HOH A 76 576 52 HOH HOH . D 4 HOH A 77 577 41 HOH HOH . D 4 HOH A 78 578 31 HOH HOH . D 4 HOH A 79 579 18 HOH HOH . D 4 HOH A 80 580 44 HOH HOH . D 4 HOH A 81 581 64 HOH HOH . D 4 HOH A 82 582 66 HOH HOH . D 4 HOH A 83 583 74 HOH HOH . D 4 HOH A 84 584 45 HOH HOH . D 4 HOH A 85 585 39 HOH HOH . D 4 HOH A 86 586 116 HOH HOH . D 4 HOH A 87 587 62 HOH HOH . D 4 HOH A 88 588 72 HOH HOH . D 4 HOH A 89 589 107 HOH HOH . D 4 HOH A 90 590 81 HOH HOH . D 4 HOH A 91 591 130 HOH HOH . D 4 HOH A 92 592 85 HOH HOH . D 4 HOH A 93 593 109 HOH HOH . D 4 HOH A 94 594 92 HOH HOH . D 4 HOH A 95 595 121 HOH HOH . D 4 HOH A 96 596 59 HOH HOH . D 4 HOH A 97 597 57 HOH HOH . D 4 HOH A 98 598 108 HOH HOH . D 4 HOH A 99 599 82 HOH HOH . D 4 HOH A 100 600 105 HOH HOH . D 4 HOH A 101 601 96 HOH HOH . D 4 HOH A 102 602 23 HOH HOH . D 4 HOH A 103 603 94 HOH HOH . D 4 HOH A 104 604 67 HOH HOH . D 4 HOH A 105 605 93 HOH HOH . D 4 HOH A 106 606 88 HOH HOH . D 4 HOH A 107 607 6 HOH HOH . D 4 HOH A 108 608 42 HOH HOH . D 4 HOH A 109 609 12 HOH HOH . D 4 HOH A 110 610 84 HOH HOH . D 4 HOH A 111 611 123 HOH HOH . D 4 HOH A 112 612 69 HOH HOH . D 4 HOH A 113 613 120 HOH HOH . D 4 HOH A 114 614 22 HOH HOH . D 4 HOH A 115 615 127 HOH HOH . D 4 HOH A 116 616 101 HOH HOH . D 4 HOH A 117 617 8 HOH HOH . D 4 HOH A 118 618 73 HOH HOH . D 4 HOH A 119 619 102 HOH HOH . D 4 HOH A 120 620 53 HOH HOH . D 4 HOH A 121 621 79 HOH HOH . D 4 HOH A 122 622 83 HOH HOH . D 4 HOH A 123 623 30 HOH HOH . D 4 HOH A 124 624 138 HOH HOH . D 4 HOH A 125 625 133 HOH HOH . D 4 HOH A 126 626 100 HOH HOH . D 4 HOH A 127 627 16 HOH HOH . D 4 HOH A 128 628 129 HOH HOH . D 4 HOH A 129 629 131 HOH HOH . D 4 HOH A 130 630 103 HOH HOH . D 4 HOH A 131 631 3 HOH HOH . D 4 HOH A 132 632 136 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 GX4 . C . C 3 5.489 44.601 21.795 0.18 25.15 ? N1 GX4 402 A 1 HETATM 2 N N1 GX4 . D . C 3 5.489 44.601 21.795 0.18 25.15 ? N1 GX4 402 A 1 HETATM 3 C C4 GX4 . C . C 3 1.002 47.1 20.707 0.18 26.82 ? C4 GX4 402 A 1 HETATM 4 C C4 GX4 . D . C 3 1.002 47.1 20.707 0.18 26.82 ? C4 GX4 402 A 1 HETATM 5 C C5 GX4 . C . C 3 -0.354 47.206 20.495 0.18 29 ? C5 GX4 402 A 1 HETATM 6 C C5 GX4 . D . C 3 -0.354 47.206 20.495 0.18 29 ? C5 GX4 402 A 1 HETATM 7 C C6 GX4 . C . C 3 4.083 45.193 19.756 0.18 25.14 ? C6 GX4 402 A 1 HETATM 8 C C6 GX4 . D . C 3 4.083 45.193 19.756 0.18 25.14 ? C6 GX4 402 A 1 HETATM 9 C C7 GX4 . C . C 3 5.493 45.077 20.363 0.18 25.27 ? C7 GX4 402 A 1 HETATM 10 C C7 GX4 . D . C 3 5.493 45.077 20.363 0.18 25.27 ? C7 GX4 402 A 1 HETATM 11 C C8 GX4 . C . C 3 4.181 44.729 22.524 0.18 24.47 ? C8 GX4 402 A 1 HETATM 12 C C8 GX4 . D . C 3 4.181 44.729 22.524 0.18 24.47 ? C8 GX4 402 A 1 HETATM 13 C C10 GX4 . C . C 3 6.413 43.577 22.219 0.18 26.44 ? C10 GX4 402 A 1 HETATM 14 C C10 GX4 . D . C 3 6.413 43.577 22.219 0.18 26.44 ? C10 GX4 402 A 1 HETATM 15 C C13 GX4 . C . C 3 7.819 42.521 24.126 0.18 27.35 ? C13 GX4 402 A 1 HETATM 16 C C13 GX4 . D . C 3 7.819 42.521 24.126 0.18 27.35 ? C13 GX4 402 A 1 HETATM 17 O O GX4 . C . C 3 7.068 42.95 21.397 0.18 26.39 ? O GX4 402 A 1 HETATM 18 O O GX4 . D . C 3 7.068 42.95 21.397 0.18 26.39 ? O GX4 402 A 1 HETATM 19 C C11 GX4 . C . C 3 6.552 43.256 23.686 0.18 27.45 ? C11 GX4 402 A 1 HETATM 20 C C11 GX4 . D . C 3 6.552 43.256 23.686 0.18 27.45 ? C11 GX4 402 A 1 HETATM 21 C C12 GX4 . C . C 3 7.603 43.957 24.52 0.18 27.64 ? C12 GX4 402 A 1 HETATM 22 C C12 GX4 . D . C 3 7.603 43.957 24.52 0.18 27.64 ? C12 GX4 402 A 1 HETATM 23 C C9 GX4 . C . C 3 3.311 45.902 22.043 0.18 23.97 ? C9 GX4 402 A 1 HETATM 24 C C9 GX4 . D . C 3 3.311 45.902 22.043 0.18 23.97 ? C9 GX4 402 A 1 HETATM 25 N N GX4 . C . C 3 3.144 46.014 20.54 0.18 24.54 ? N GX4 402 A 1 HETATM 26 N N GX4 . D . C 3 3.144 46.014 20.54 0.18 24.54 ? N GX4 402 A 1 HETATM 27 C C3 GX4 . C . C 3 1.757 46.118 20.074 0.18 26.74 ? C3 GX4 402 A 1 HETATM 28 C C3 GX4 . D . C 3 1.757 46.118 20.074 0.18 26.74 ? C3 GX4 402 A 1 HETATM 29 C C2 GX4 . C . C 3 1.091 45.273 19.173 0.18 27.62 ? C2 GX4 402 A 1 HETATM 30 C C2 GX4 . D . C 3 1.091 45.273 19.173 0.18 27.62 ? C2 GX4 402 A 1 HETATM 31 C C1 GX4 . C . C 3 -0.296 45.341 19.011 0.18 28.5 ? C1 GX4 402 A 1 HETATM 32 C C1 GX4 . D . C 3 -0.296 45.341 19.011 0.18 28.5 ? C1 GX4 402 A 1 HETATM 33 C C GX4 . C . C 3 -1.017 46.326 19.702 0.18 29.12 ? C GX4 402 A 1 HETATM 34 C C GX4 . D . C 3 -1.017 46.326 19.702 0.18 29.12 ? C GX4 402 A 1 HETATM 35 F F GX4 . C . C 3 -2.357 46.423 19.696 0.18 29.33 ? F GX4 402 A 1 HETATM 36 F F GX4 . D . C 3 -2.357 46.423 19.696 0.18 29.33 ? F GX4 402 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 248 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 36 #