data_5QIG # _model_server_result.job_id w4MGvrgv3TzrCpTARaglTw _model_server_result.datetime_utc '2024-10-27 22:23:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5qig # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 5QIG # _exptl.entry_id 5QIG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5QIG _cell.length_a 97.54 _cell.length_b 97.54 _cell.length_c 80.646 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5QIG _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMN sing 83 n n N1 C10 FMN doub 84 n n C2 O2 FMN doub 85 n n C2 N3 FMN sing 86 n n N3 C4 FMN sing 87 n n N3 HN3 FMN sing 88 n n C4 O4 FMN doub 89 n n C4 C4A FMN sing 90 n n C4A N5 FMN doub 91 n n C4A C10 FMN sing 92 n n N5 C5A FMN sing 93 n n C5A C6 FMN doub 94 n y C5A C9A FMN sing 95 n y C6 C7 FMN sing 96 n y C6 H6 FMN sing 97 n n C7 C7M FMN sing 98 n n C7 C8 FMN doub 99 n y C7M HM71 FMN sing 100 n n C7M HM72 FMN sing 101 n n C7M HM73 FMN sing 102 n n C8 C8M FMN sing 103 n n C8 C9 FMN sing 104 n y C8M HM81 FMN sing 105 n n C8M HM82 FMN sing 106 n n C8M HM83 FMN sing 107 n n C9 C9A FMN doub 108 n y C9 H9 FMN sing 109 n n C9A N10 FMN sing 110 n n N10 C10 FMN sing 111 n n N10 C1' FMN sing 112 n n C1' C2' FMN sing 113 n n C1' "H1'1" FMN sing 114 n n C1' "H1'2" FMN sing 115 n n C2' O2' FMN sing 116 n n C2' C3' FMN sing 117 n n C2' H2' FMN sing 118 n n O2' HO2' FMN sing 119 n n C3' O3' FMN sing 120 n n C3' C4' FMN sing 121 n n C3' H3' FMN sing 122 n n O3' HO3' FMN sing 123 n n C4' O4' FMN sing 124 n n C4' C5' FMN sing 125 n n C4' H4' FMN sing 126 n n O4' HO4' FMN sing 127 n n C5' O5' FMN sing 128 n n C5' "H5'1" FMN sing 129 n n C5' "H5'2" FMN sing 130 n n O5' P FMN sing 131 n n P O1P FMN doub 132 n n P O2P FMN sing 133 n n P O3P FMN sing 134 n n O2P HOP2 FMN sing 135 n n O3P HOP3 FMN sing 136 n n # _atom_sites.entry_id 5QIG _atom_sites.fract_transf_matrix[1][1] 0.010252 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010252 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0124 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMN A 1 401 1 FMN FMN . C 3 GWP A 1 402 1 GWP LIG . D 3 GWP A 1 403 2 GWP LIG . E 4 HOH A 1 501 91 HOH HOH . E 4 HOH A 2 502 47 HOH HOH . E 4 HOH A 3 503 71 HOH HOH . E 4 HOH A 4 504 68 HOH HOH . E 4 HOH A 5 505 65 HOH HOH . E 4 HOH A 6 506 26 HOH HOH . E 4 HOH A 7 507 27 HOH HOH . E 4 HOH A 8 508 132 HOH HOH . E 4 HOH A 9 509 29 HOH HOH . E 4 HOH A 10 510 31 HOH HOH . E 4 HOH A 11 511 14 HOH HOH . E 4 HOH A 12 512 56 HOH HOH . E 4 HOH A 13 513 99 HOH HOH . E 4 HOH A 14 514 97 HOH HOH . E 4 HOH A 15 515 40 HOH HOH . E 4 HOH A 16 516 126 HOH HOH . E 4 HOH A 17 517 112 HOH HOH . E 4 HOH A 18 518 33 HOH HOH . E 4 HOH A 19 519 35 HOH HOH . E 4 HOH A 20 520 19 HOH HOH . E 4 HOH A 21 521 10 HOH HOH . E 4 HOH A 22 522 54 HOH HOH . E 4 HOH A 23 523 134 HOH HOH . E 4 HOH A 24 524 75 HOH HOH . E 4 HOH A 25 525 32 HOH HOH . E 4 HOH A 26 526 50 HOH HOH . E 4 HOH A 27 527 125 HOH HOH . E 4 HOH A 28 528 2 HOH HOH . E 4 HOH A 29 529 113 HOH HOH . E 4 HOH A 30 530 111 HOH HOH . E 4 HOH A 31 531 80 HOH HOH . E 4 HOH A 32 532 87 HOH HOH . E 4 HOH A 33 533 89 HOH HOH . E 4 HOH A 34 534 1 HOH HOH . E 4 HOH A 35 535 36 HOH HOH . E 4 HOH A 36 536 15 HOH HOH . E 4 HOH A 37 537 28 HOH HOH . E 4 HOH A 38 538 55 HOH HOH . E 4 HOH A 39 539 61 HOH HOH . E 4 HOH A 40 540 48 HOH HOH . E 4 HOH A 41 541 43 HOH HOH . E 4 HOH A 42 542 20 HOH HOH . E 4 HOH A 43 543 104 HOH HOH . E 4 HOH A 44 544 86 HOH HOH . E 4 HOH A 45 545 114 HOH HOH . E 4 HOH A 46 546 51 HOH HOH . E 4 HOH A 47 547 5 HOH HOH . E 4 HOH A 48 548 11 HOH HOH . E 4 HOH A 49 549 58 HOH HOH . E 4 HOH A 50 550 9 HOH HOH . E 4 HOH A 51 551 17 HOH HOH . E 4 HOH A 52 552 25 HOH HOH . E 4 HOH A 53 553 106 HOH HOH . E 4 HOH A 54 554 46 HOH HOH . E 4 HOH A 55 555 98 HOH HOH . E 4 HOH A 56 556 13 HOH HOH . E 4 HOH A 57 557 49 HOH HOH . E 4 HOH A 58 558 7 HOH HOH . E 4 HOH A 59 559 90 HOH HOH . E 4 HOH A 60 560 130 HOH HOH . E 4 HOH A 61 561 69 HOH HOH . E 4 HOH A 62 562 85 HOH HOH . E 4 HOH A 63 563 81 HOH HOH . E 4 HOH A 64 564 38 HOH HOH . E 4 HOH A 65 565 4 HOH HOH . E 4 HOH A 66 566 52 HOH HOH . E 4 HOH A 67 567 110 HOH HOH . E 4 HOH A 68 568 59 HOH HOH . E 4 HOH A 69 569 74 HOH HOH . E 4 HOH A 70 570 45 HOH HOH . E 4 HOH A 71 571 44 HOH HOH . E 4 HOH A 72 572 60 HOH HOH . E 4 HOH A 73 573 77 HOH HOH . E 4 HOH A 74 574 128 HOH HOH . E 4 HOH A 75 575 41 HOH HOH . E 4 HOH A 76 576 24 HOH HOH . E 4 HOH A 77 577 95 HOH HOH . E 4 HOH A 78 578 116 HOH HOH . E 4 HOH A 79 579 70 HOH HOH . E 4 HOH A 80 580 18 HOH HOH . E 4 HOH A 81 581 118 HOH HOH . E 4 HOH A 82 582 78 HOH HOH . E 4 HOH A 83 583 107 HOH HOH . E 4 HOH A 84 584 66 HOH HOH . E 4 HOH A 85 585 21 HOH HOH . E 4 HOH A 86 586 124 HOH HOH . E 4 HOH A 87 587 39 HOH HOH . E 4 HOH A 88 588 108 HOH HOH . E 4 HOH A 89 589 62 HOH HOH . E 4 HOH A 90 590 37 HOH HOH . E 4 HOH A 91 591 82 HOH HOH . E 4 HOH A 92 592 94 HOH HOH . E 4 HOH A 93 593 117 HOH HOH . E 4 HOH A 94 594 109 HOH HOH . E 4 HOH A 95 595 23 HOH HOH . E 4 HOH A 96 596 67 HOH HOH . E 4 HOH A 97 597 92 HOH HOH . E 4 HOH A 98 598 72 HOH HOH . E 4 HOH A 99 599 6 HOH HOH . E 4 HOH A 100 600 93 HOH HOH . E 4 HOH A 101 601 96 HOH HOH . E 4 HOH A 102 602 57 HOH HOH . E 4 HOH A 103 603 122 HOH HOH . E 4 HOH A 104 604 123 HOH HOH . E 4 HOH A 105 605 121 HOH HOH . E 4 HOH A 106 606 12 HOH HOH . E 4 HOH A 107 607 42 HOH HOH . E 4 HOH A 108 608 127 HOH HOH . E 4 HOH A 109 609 101 HOH HOH . E 4 HOH A 110 610 88 HOH HOH . E 4 HOH A 111 611 105 HOH HOH . E 4 HOH A 112 612 120 HOH HOH . E 4 HOH A 113 613 73 HOH HOH . E 4 HOH A 114 614 22 HOH HOH . E 4 HOH A 115 615 102 HOH HOH . E 4 HOH A 116 616 84 HOH HOH . E 4 HOH A 117 617 8 HOH HOH . E 4 HOH A 118 618 64 HOH HOH . E 4 HOH A 119 619 79 HOH HOH . E 4 HOH A 120 620 53 HOH HOH . E 4 HOH A 121 621 83 HOH HOH . E 4 HOH A 122 622 133 HOH HOH . E 4 HOH A 123 623 30 HOH HOH . E 4 HOH A 124 624 100 HOH HOH . E 4 HOH A 125 625 138 HOH HOH . E 4 HOH A 126 626 16 HOH HOH . E 4 HOH A 127 627 129 HOH HOH . E 4 HOH A 128 628 103 HOH HOH . E 4 HOH A 129 629 34 HOH HOH . E 4 HOH A 130 630 131 HOH HOH . E 4 HOH A 131 631 3 HOH HOH . E 4 HOH A 132 632 136 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . B 2 8.796 30.066 18.325 1 17.76 ? N1 FMN 401 A 1 HETATM 2 C C2 FMN . . . B 2 8.855 31.379 18.003 1 19.43 ? C2 FMN 401 A 1 HETATM 3 O O2 FMN . . . B 2 8.816 31.661 16.81 1 19.49 ? O2 FMN 401 A 1 HETATM 4 N N3 FMN . . . B 2 8.987 32.342 18.941 1 18.88 ? N3 FMN 401 A 1 HETATM 5 C C4 FMN . . . B 2 8.989 32.072 20.249 1 19.09 ? C4 FMN 401 A 1 HETATM 6 O O4 FMN . . . B 2 9.096 32.949 21.098 1 20.87 ? O4 FMN 401 A 1 HETATM 7 C C4A FMN . . . B 2 8.878 30.691 20.68 1 17.06 ? C4A FMN 401 A 1 HETATM 8 N N5 FMN . . . B 2 8.878 30.366 21.993 1 18 ? N5 FMN 401 A 1 HETATM 9 C C5A FMN . . . B 2 8.863 29.084 22.396 1 19.15 ? C5A FMN 401 A 1 HETATM 10 C C6 FMN . . . B 2 8.877 28.733 23.759 1 18.93 ? C6 FMN 401 A 1 HETATM 11 C C7 FMN . . . B 2 8.9 27.392 24.087 1 20.82 ? C7 FMN 401 A 1 HETATM 12 C C7M FMN . . . B 2 8.928 27.022 25.528 1 23.64 ? C7M FMN 401 A 1 HETATM 13 C C8 FMN . . . B 2 8.827 26.335 23.068 1 19.76 ? C8 FMN 401 A 1 HETATM 14 C C8M FMN . . . B 2 8.854 24.876 23.5 1 20.99 ? C8M FMN 401 A 1 HETATM 15 C C9 FMN . . . B 2 8.848 26.684 21.743 1 16.3 ? C9 FMN 401 A 1 HETATM 16 C C9A FMN . . . B 2 8.814 28.017 21.359 1 17.08 ? C9A FMN 401 A 1 HETATM 17 N N10 FMN . . . B 2 8.785 28.37 19.993 1 16.04 ? N10 FMN 401 A 1 HETATM 18 C C10 FMN . . . B 2 8.849 29.714 19.628 1 16.73 ? C10 FMN 401 A 1 HETATM 19 C C1' FMN . . . B 2 8.84 27.356 18.916 1 16.99 ? C1' FMN 401 A 1 HETATM 20 C C2' FMN . . . B 2 10.358 26.96 18.794 1 15.64 ? C2' FMN 401 A 1 HETATM 21 O O2' FMN . . . B 2 11.075 28.003 18.032 1 17.12 ? O2' FMN 401 A 1 HETATM 22 C C3' FMN . . . B 2 10.602 25.691 18.007 1 15.65 ? C3' FMN 401 A 1 HETATM 23 O O3' FMN . . . B 2 9.8 25.711 16.812 1 16.72 ? O3' FMN 401 A 1 HETATM 24 C C4' FMN . . . B 2 10.296 24.425 18.775 1 16.34 ? C4' FMN 401 A 1 HETATM 25 O O4' FMN . . . B 2 10.688 24.578 20.145 1 16.85 ? O4' FMN 401 A 1 HETATM 26 C C5' FMN . . . B 2 10.993 23.232 18.196 1 15.85 ? C5' FMN 401 A 1 HETATM 27 O O5' FMN . . . B 2 10.58 22.006 18.812 1 15.1 ? O5' FMN 401 A 1 HETATM 28 P P FMN . . . B 2 11.375 21.317 20.048 1 13.32 ? P FMN 401 A 1 HETATM 29 O O1P FMN . . . B 2 12.875 21.325 19.826 1 14.94 ? O1P FMN 401 A 1 HETATM 30 O O2P FMN . . . B 2 10.768 19.923 19.998 1 13.58 -1 O2P FMN 401 A 1 HETATM 31 O O3P FMN . . . B 2 11.055 22.058 21.299 1 13.62 -1 O3P FMN 401 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 31 #