data_5QIL # _model_server_result.job_id vUrjNADbGVqZWGPq8lPVCw _model_server_result.datetime_utc '2025-01-10 13:38:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5qil # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 5QIL # _exptl.entry_id 5QIL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 359.381 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-{4-[3-(6-methoxypyridin-3-yl)-1H-pyrrolo[3,2-b]pyridin-2-yl]pyridin-2-yl}acetamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5QIL _cell.length_a 41.6 _cell.length_b 76.98 _cell.length_c 89.08 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5QIL _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H17 N5 O2' _chem_comp.formula_weight 359.381 _chem_comp.id J2V _chem_comp.mon_nstd_flag . _chem_comp.name N-{4-[3-(6-methoxypyridin-3-yl)-1H-pyrrolo[3,2-b]pyridin-2-yl]pyridin-2-yl}acetamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C25 C23 J2V sing 173 n n N13 C12 J2V doub 174 n y N13 C14 J2V sing 175 n y N22 C23 J2V sing 176 n n N22 C14 J2V sing 177 n n C12 C11 J2V sing 178 n y C23 O24 J2V doub 179 n n C14 C15 J2V doub 180 n y C11 C10 J2V doub 181 n y C15 C10 J2V sing 182 n y C20 C21 J2V doub 183 n y C20 C19 J2V sing 184 n y C10 C8 J2V sing 185 n n O26 C19 J2V sing 186 n n O26 C27 J2V sing 187 n n C21 C16 J2V sing 188 n y C19 N18 J2V doub 189 n y C8 C7 J2V doub 190 n y C8 N9 J2V sing 191 n y C16 C7 J2V sing 192 n n C16 C17 J2V doub 193 n y N18 C17 J2V sing 194 n y C7 C1 J2V sing 195 n y N9 C2 J2V sing 196 n y C1 C2 J2V doub 197 n y C1 N6 J2V sing 198 n y C2 C3 J2V sing 199 n y N6 C5 J2V doub 200 n y C3 C4 J2V doub 201 n y C5 C4 J2V sing 202 n y C17 H35 J2V sing 203 n n C15 H34 J2V sing 204 n n C20 H36 J2V sing 205 n n C21 H37 J2V sing 206 n n C11 H32 J2V sing 207 n n C12 H33 J2V sing 208 n n C27 H42 J2V sing 209 n n C27 H44 J2V sing 210 n n C27 H43 J2V sing 211 n n C3 H28 J2V sing 212 n n C4 H29 J2V sing 213 n n C5 H30 J2V sing 214 n n N9 H31 J2V sing 215 n n N22 H38 J2V sing 216 n n C25 H39 J2V sing 217 n n C25 H40 J2V sing 218 n n C25 H41 J2V sing 219 n n # _atom_sites.entry_id 5QIL _atom_sites.fract_transf_matrix[1][1] 0.024038 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01299 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011226 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 J2V A 1 601 1 J2V LG1 . C 3 HOH A 1 701 99 HOH HOH . C 3 HOH A 2 702 74 HOH HOH . C 3 HOH A 3 703 101 HOH HOH . C 3 HOH A 4 704 1 HOH HOH . C 3 HOH A 5 705 117 HOH HOH . C 3 HOH A 6 706 155 HOH HOH . C 3 HOH A 7 707 102 HOH HOH . C 3 HOH A 8 708 46 HOH HOH . C 3 HOH A 9 709 47 HOH HOH . C 3 HOH A 10 710 27 HOH HOH . C 3 HOH A 11 711 98 HOH HOH . C 3 HOH A 12 712 18 HOH HOH . C 3 HOH A 13 713 3 HOH HOH . C 3 HOH A 14 714 2 HOH HOH . C 3 HOH A 15 715 90 HOH HOH . C 3 HOH A 16 716 119 HOH HOH . C 3 HOH A 17 717 12 HOH HOH . C 3 HOH A 18 718 52 HOH HOH . C 3 HOH A 19 719 13 HOH HOH . C 3 HOH A 20 720 143 HOH HOH . C 3 HOH A 21 721 56 HOH HOH . C 3 HOH A 22 722 36 HOH HOH . C 3 HOH A 23 723 7 HOH HOH . C 3 HOH A 24 724 107 HOH HOH . C 3 HOH A 25 725 87 HOH HOH . C 3 HOH A 26 726 4 HOH HOH . C 3 HOH A 27 727 42 HOH HOH . C 3 HOH A 28 728 135 HOH HOH . C 3 HOH A 29 729 67 HOH HOH . C 3 HOH A 30 730 17 HOH HOH . C 3 HOH A 31 731 29 HOH HOH . C 3 HOH A 32 732 66 HOH HOH . C 3 HOH A 33 733 83 HOH HOH . C 3 HOH A 34 734 48 HOH HOH . C 3 HOH A 35 735 151 HOH HOH . C 3 HOH A 36 736 43 HOH HOH . C 3 HOH A 37 737 71 HOH HOH . C 3 HOH A 38 738 25 HOH HOH . C 3 HOH A 39 739 44 HOH HOH . C 3 HOH A 40 740 34 HOH HOH . C 3 HOH A 41 741 91 HOH HOH . C 3 HOH A 42 742 146 HOH HOH . C 3 HOH A 43 743 60 HOH HOH . C 3 HOH A 44 744 31 HOH HOH . C 3 HOH A 45 745 137 HOH HOH . C 3 HOH A 46 746 8 HOH HOH . C 3 HOH A 47 747 5 HOH HOH . C 3 HOH A 48 748 84 HOH HOH . C 3 HOH A 49 749 120 HOH HOH . C 3 HOH A 50 750 76 HOH HOH . C 3 HOH A 51 751 149 HOH HOH . C 3 HOH A 52 752 141 HOH HOH . C 3 HOH A 53 753 113 HOH HOH . C 3 HOH A 54 754 55 HOH HOH . C 3 HOH A 55 755 62 HOH HOH . C 3 HOH A 56 756 35 HOH HOH . C 3 HOH A 57 757 131 HOH HOH . C 3 HOH A 58 758 11 HOH HOH . C 3 HOH A 59 759 85 HOH HOH . C 3 HOH A 60 760 145 HOH HOH . C 3 HOH A 61 761 110 HOH HOH . C 3 HOH A 62 762 104 HOH HOH . C 3 HOH A 63 763 78 HOH HOH . C 3 HOH A 64 764 77 HOH HOH . C 3 HOH A 65 765 21 HOH HOH . C 3 HOH A 66 766 59 HOH HOH . C 3 HOH A 67 767 93 HOH HOH . C 3 HOH A 68 768 148 HOH HOH . C 3 HOH A 69 769 89 HOH HOH . C 3 HOH A 70 770 10 HOH HOH . C 3 HOH A 71 771 6 HOH HOH . C 3 HOH A 72 772 70 HOH HOH . C 3 HOH A 73 773 64 HOH HOH . C 3 HOH A 74 774 14 HOH HOH . C 3 HOH A 75 775 130 HOH HOH . C 3 HOH A 76 776 136 HOH HOH . C 3 HOH A 77 777 127 HOH HOH . C 3 HOH A 78 778 45 HOH HOH . C 3 HOH A 79 779 23 HOH HOH . C 3 HOH A 80 780 96 HOH HOH . C 3 HOH A 81 781 156 HOH HOH . C 3 HOH A 82 782 9 HOH HOH . C 3 HOH A 83 783 114 HOH HOH . C 3 HOH A 84 784 121 HOH HOH . C 3 HOH A 85 785 88 HOH HOH . C 3 HOH A 86 786 147 HOH HOH . C 3 HOH A 87 787 41 HOH HOH . C 3 HOH A 88 788 140 HOH HOH . C 3 HOH A 89 789 79 HOH HOH . C 3 HOH A 90 790 68 HOH HOH . C 3 HOH A 91 791 57 HOH HOH . C 3 HOH A 92 792 39 HOH HOH . C 3 HOH A 93 793 38 HOH HOH . C 3 HOH A 94 794 139 HOH HOH . C 3 HOH A 95 795 95 HOH HOH . C 3 HOH A 96 796 122 HOH HOH . C 3 HOH A 97 797 112 HOH HOH . C 3 HOH A 98 798 33 HOH HOH . C 3 HOH A 99 799 16 HOH HOH . C 3 HOH A 100 800 150 HOH HOH . C 3 HOH A 101 801 22 HOH HOH . C 3 HOH A 102 802 54 HOH HOH . C 3 HOH A 103 803 19 HOH HOH . C 3 HOH A 104 804 30 HOH HOH . C 3 HOH A 105 805 81 HOH HOH . C 3 HOH A 106 806 28 HOH HOH . C 3 HOH A 107 807 69 HOH HOH . C 3 HOH A 108 808 50 HOH HOH . C 3 HOH A 109 809 61 HOH HOH . C 3 HOH A 110 810 126 HOH HOH . C 3 HOH A 111 811 108 HOH HOH . C 3 HOH A 112 812 80 HOH HOH . C 3 HOH A 113 813 111 HOH HOH . C 3 HOH A 114 814 37 HOH HOH . C 3 HOH A 115 815 125 HOH HOH . C 3 HOH A 116 816 123 HOH HOH . C 3 HOH A 117 817 15 HOH HOH . C 3 HOH A 118 818 24 HOH HOH . C 3 HOH A 119 819 20 HOH HOH . C 3 HOH A 120 820 129 HOH HOH . C 3 HOH A 121 821 49 HOH HOH . C 3 HOH A 122 822 128 HOH HOH . C 3 HOH A 123 823 40 HOH HOH . C 3 HOH A 124 824 53 HOH HOH . C 3 HOH A 125 825 105 HOH HOH . C 3 HOH A 126 826 75 HOH HOH . C 3 HOH A 127 827 26 HOH HOH . C 3 HOH A 128 828 92 HOH HOH . C 3 HOH A 129 829 94 HOH HOH . C 3 HOH A 130 830 63 HOH HOH . C 3 HOH A 131 831 82 HOH HOH . C 3 HOH A 132 832 142 HOH HOH . C 3 HOH A 133 833 32 HOH HOH . C 3 HOH A 134 834 116 HOH HOH . C 3 HOH A 135 835 65 HOH HOH . C 3 HOH A 136 836 115 HOH HOH . C 3 HOH A 137 837 109 HOH HOH . C 3 HOH A 138 838 58 HOH HOH . C 3 HOH A 139 839 132 HOH HOH . C 3 HOH A 140 840 138 HOH HOH . C 3 HOH A 141 841 144 HOH HOH . C 3 HOH A 142 842 51 HOH HOH . C 3 HOH A 143 843 73 HOH HOH . C 3 HOH A 144 844 154 HOH HOH . C 3 HOH A 145 845 86 HOH HOH . C 3 HOH A 146 846 100 HOH HOH . C 3 HOH A 147 847 106 HOH HOH . C 3 HOH A 148 848 72 HOH HOH . C 3 HOH A 149 849 133 HOH HOH . C 3 HOH A 150 850 134 HOH HOH . C 3 HOH A 151 851 97 HOH HOH . C 3 HOH A 152 852 118 HOH HOH . C 3 HOH A 153 853 124 HOH HOH . C 3 HOH A 154 854 103 HOH HOH . C 3 HOH A 155 855 152 HOH HOH . C 3 HOH A 156 856 153 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C17 J2V . . . B 2 6.993 9.635 5.965 1 16.86 ? C17 J2V 601 A 1 HETATM 2 C C16 J2V . . . B 2 5.78 9.755 5.3 1 18.2 ? C16 J2V 601 A 1 HETATM 3 C C15 J2V . . . B 2 2.389 7.3 3.288 1 18.09 ? C15 J2V 601 A 1 HETATM 4 C C19 J2V . . . B 2 8.029 11.092 4.562 1 17.8 ? C19 J2V 601 A 1 HETATM 5 C C20 J2V . . . B 2 6.859 11.304 3.803 1 15.86 ? C20 J2V 601 A 1 HETATM 6 C C21 J2V . . . B 2 5.726 10.605 4.193 1 16.66 ? C21 J2V 601 A 1 HETATM 7 C C23 J2V . . . B 2 -0.068 6 1.93 1 20.59 ? C23 J2V 601 A 1 HETATM 8 C C11 J2V . . . B 2 4.774 7.498 3.107 1 17.17 ? C11 J2V 601 A 1 HETATM 9 C C12 J2V . . . B 2 4.682 6.816 1.908 1 16.13 ? C12 J2V 601 A 1 HETATM 10 C C27 J2V . . . B 2 10.392 11.493 4.832 1 19.78 ? C27 J2V 601 A 1 HETATM 11 C C1 J2V . . . B 2 4.108 9.252 7.215 1 21.1 ? C1 J2V 601 A 1 HETATM 12 C C2 J2V . . . B 2 2.903 8.556 7.306 1 22.64 ? C2 J2V 601 A 1 HETATM 13 C C3 J2V . . . B 2 2.189 8.564 8.512 1 23.36 ? C3 J2V 601 A 1 HETATM 14 C C4 J2V . . . B 2 2.727 9.276 9.577 1 25.42 ? C4 J2V 601 A 1 HETATM 15 C C5 J2V . . . B 2 3.944 9.941 9.402 1 26.26 ? C5 J2V 601 A 1 HETATM 16 N N6 J2V . . . B 2 4.639 9.943 8.245 1 22.78 ? N6 J2V 601 A 1 HETATM 17 C C7 J2V . . . B 2 4.576 9.093 5.857 1 18.59 ? C7 J2V 601 A 1 HETATM 18 C C8 J2V . . . B 2 3.654 8.299 5.205 1 21.86 ? C8 J2V 601 A 1 HETATM 19 N N9 J2V . . . B 2 2.638 7.981 6.089 1 21.38 ? N9 J2V 601 A 1 HETATM 20 C C10 J2V . . . B 2 3.607 7.73 3.833 1 20.58 ? C10 J2V 601 A 1 HETATM 21 N N13 J2V . . . B 2 3.521 6.368 1.379 1 18.99 ? N13 J2V 601 A 1 HETATM 22 C C14 J2V . . . B 2 2.386 6.6 2.068 1 19.52 ? C14 J2V 601 A 1 HETATM 23 N N18 J2V . . . B 2 8.108 10.289 5.618 1 17.99 ? N18 J2V 601 A 1 HETATM 24 N N22 J2V . . . B 2 1.218 6.029 1.459 1 18.66 ? N22 J2V 601 A 1 HETATM 25 O O24 J2V . . . B 2 -0.418 6.559 2.949 1 22.45 ? O24 J2V 601 A 1 HETATM 26 C C25 J2V . . . B 2 -1.058 5.212 1.116 1 21.15 ? C25 J2V 601 A 1 HETATM 27 O O26 J2V . . . B 2 9.145 11.717 4.125 1 21.43 ? O26 J2V 601 A 1 HETATM 28 H H35 J2V . . . B 2 7.095 8.98 6.83 0 16.87 ? H35 J2V 601 A 1 HETATM 29 H H34 J2V . . . B 2 1.469 7.583 3.793 0 18.18 ? H34 J2V 601 A 1 HETATM 30 H H36 J2V . . . B 2 6.849 11.983 2.953 0 15.88 ? H36 J2V 601 A 1 HETATM 31 H H37 J2V . . . B 2 4.8 10.72 3.633 0 16.64 ? H37 J2V 601 A 1 HETATM 32 H H32 J2V . . . B 2 5.752 7.812 3.466 0 17.24 ? H32 J2V 601 A 1 HETATM 33 H H33 J2V . . . B 2 5.564 6.556 1.326 0 16.21 ? H33 J2V 601 A 1 HETATM 34 H H42 J2V . . . B 2 11.094 12.114 4.279 0 19.84 ? H42 J2V 601 A 1 HETATM 35 H H44 J2V . . . B 2 10.721 10.456 4.794 0 19.84 ? H44 J2V 601 A 1 HETATM 36 H H43 J2V . . . B 2 10.356 11.817 5.872 0 19.84 ? H43 J2V 601 A 1 HETATM 37 H H28 J2V . . . B 2 1.245 8.032 8.614 0 23.42 ? H28 J2V 601 A 1 HETATM 38 H H29 J2V . . . B 2 2.204 9.318 10.532 0 25.5 ? H29 J2V 601 A 1 HETATM 39 H H30 J2V . . . B 2 4.418 10.5 10.208 0 26.36 ? H30 J2V 601 A 1 HETATM 40 H H31 J2V . . . B 2 1.829 7.395 5.91 0 21.37 ? H31 J2V 601 A 1 HETATM 41 H H38 J2V . . . B 2 1.399 5.609 0.553 0 18.72 ? H38 J2V 601 A 1 HETATM 42 H H39 J2V . . . B 2 -0.622 4.573 0.352 0 21.19 ? H39 J2V 601 A 1 HETATM 43 H H40 J2V . . . B 2 -1.765 5.868 0.61 0 21.19 ? H40 J2V 601 A 1 HETATM 44 H H41 J2V . . . B 2 -1.654 4.561 1.754 0 21.19 ? H41 J2V 601 A 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 44 #