data_5QIO # _model_server_result.job_id 1jgybxOhowMjRUKreAPkvg _model_server_result.datetime_utc '2024-11-22 05:14:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5qio # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 5QIO # _exptl.entry_id 5QIO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 252.697 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "(1S,2S)-N'-(chloroacetyl)-2-phenylcyclopropane-1-carbohydrazide" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 116.25 _cell.angle_gamma 90 _cell.entry_id 5QIO _cell.length_a 46.797 _cell.length_b 58.146 _cell.length_c 49.295 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5QIO _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C12 H13 Cl N2 O2' _chem_comp.formula_weight 252.697 _chem_comp.id J4Y _chem_comp.mon_nstd_flag . _chem_comp.name "(1S,2S)-N'-(chloroacetyl)-2-phenylcyclopropane-1-carbohydrazide" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 J4Y doub 173 n n C2 CL J4Y sing 174 n n C2 C1 J4Y sing 175 n n C1 N1 J4Y sing 176 n n N1 N J4Y sing 177 n n N C J4Y sing 178 n n C10 C11 J4Y doub 179 n y C10 C9 J4Y sing 180 n y C O J4Y doub 181 n n C C3 J4Y sing 182 n n C11 C6 J4Y sing 183 n y C3 C4 J4Y sing 184 n n C3 C5 J4Y sing 185 n n C9 C8 J4Y doub 186 n y C6 C4 J4Y sing 187 n n C6 C7 J4Y doub 188 n y C4 C5 J4Y sing 189 n n C8 C7 J4Y sing 190 n y N1 H1 J4Y sing 191 n n C4 H2 J4Y sing 192 n n C5 H3 J4Y sing 193 n n C5 H4 J4Y sing 194 n n C7 H5 J4Y sing 195 n n C8 H6 J4Y sing 196 n n C10 H7 J4Y sing 197 n n N H8 J4Y sing 198 n n C11 H9 J4Y sing 199 n n C2 H10 J4Y sing 200 n n C2 H11 J4Y sing 201 n n C3 H12 J4Y sing 202 n n C9 H13 J4Y sing 203 n n # _atom_sites.entry_id 5QIO _atom_sites.fract_transf_matrix[1][1] 0.021369 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.010538 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017198 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022619 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 UNL A 1 301 301 UNL UNL . C 3 J4Y A 1 302 1 J4Y LIG . D 4 HOH A 1 401 14 HOH HOH . D 4 HOH A 2 402 117 HOH HOH . D 4 HOH A 3 403 365 HOH HOH . D 4 HOH A 4 404 112 HOH HOH . D 4 HOH A 5 405 262 HOH HOH . D 4 HOH A 6 406 38 HOH HOH . D 4 HOH A 7 407 154 HOH HOH . D 4 HOH A 8 408 69 HOH HOH . D 4 HOH A 9 409 189 HOH HOH . D 4 HOH A 10 410 79 HOH HOH . D 4 HOH A 11 411 368 HOH HOH . D 4 HOH A 12 412 348 HOH HOH . D 4 HOH A 13 413 19 HOH HOH . D 4 HOH A 14 414 369 HOH HOH . D 4 HOH A 15 415 157 HOH HOH . D 4 HOH A 16 416 190 HOH HOH . D 4 HOH A 17 417 118 HOH HOH . D 4 HOH A 18 418 152 HOH HOH . D 4 HOH A 19 419 128 HOH HOH . D 4 HOH A 20 420 85 HOH HOH . D 4 HOH A 21 421 273 HOH HOH . D 4 HOH A 22 422 351 HOH HOH . D 4 HOH A 23 423 114 HOH HOH . D 4 HOH A 24 424 15 HOH HOH . D 4 HOH A 25 425 108 HOH HOH . D 4 HOH A 26 426 103 HOH HOH . D 4 HOH A 27 427 13 HOH HOH . D 4 HOH A 28 428 77 HOH HOH . D 4 HOH A 29 429 40 HOH HOH . D 4 HOH A 30 430 336 HOH HOH . D 4 HOH A 31 431 168 HOH HOH . D 4 HOH A 32 432 37 HOH HOH . D 4 HOH A 33 433 145 HOH HOH . D 4 HOH A 34 434 343 HOH HOH . D 4 HOH A 35 435 170 HOH HOH . D 4 HOH A 36 436 42 HOH HOH . D 4 HOH A 37 437 18 HOH HOH . D 4 HOH A 38 438 7 HOH HOH . D 4 HOH A 39 439 11 HOH HOH . D 4 HOH A 40 440 119 HOH HOH . D 4 HOH A 41 441 27 HOH HOH . D 4 HOH A 42 442 26 HOH HOH . D 4 HOH A 43 443 360 HOH HOH . D 4 HOH A 44 444 24 HOH HOH . D 4 HOH A 45 445 64 HOH HOH . D 4 HOH A 46 446 68 HOH HOH . D 4 HOH A 47 447 78 HOH HOH . D 4 HOH A 48 448 163 HOH HOH . D 4 HOH A 49 449 107 HOH HOH . D 4 HOH A 50 450 150 HOH HOH . D 4 HOH A 51 451 17 HOH HOH . D 4 HOH A 52 452 31 HOH HOH . D 4 HOH A 53 453 93 HOH HOH . D 4 HOH A 54 454 30 HOH HOH . D 4 HOH A 55 455 46 HOH HOH . D 4 HOH A 56 456 148 HOH HOH . D 4 HOH A 57 457 43 HOH HOH . D 4 HOH A 58 458 36 HOH HOH . D 4 HOH A 59 459 359 HOH HOH . D 4 HOH A 60 460 67 HOH HOH . D 4 HOH A 61 461 52 HOH HOH . D 4 HOH A 62 462 120 HOH HOH . D 4 HOH A 63 463 41 HOH HOH . D 4 HOH A 64 464 2 HOH HOH . D 4 HOH A 65 465 53 HOH HOH . D 4 HOH A 66 466 134 HOH HOH . D 4 HOH A 67 467 32 HOH HOH . D 4 HOH A 68 468 350 HOH HOH . D 4 HOH A 69 469 72 HOH HOH . D 4 HOH A 70 470 12 HOH HOH . D 4 HOH A 71 471 105 HOH HOH . D 4 HOH A 72 472 247 HOH HOH . D 4 HOH A 73 473 22 HOH HOH . D 4 HOH A 74 474 33 HOH HOH . D 4 HOH A 75 475 202 HOH HOH . D 4 HOH A 76 476 338 HOH HOH . D 4 HOH A 77 477 345 HOH HOH . D 4 HOH A 78 478 1 HOH HOH . D 4 HOH A 79 479 97 HOH HOH . D 4 HOH A 80 480 21 HOH HOH . D 4 HOH A 81 481 48 HOH HOH . D 4 HOH A 82 482 60 HOH HOH . D 4 HOH A 83 483 334 HOH HOH . D 4 HOH A 84 484 87 HOH HOH . D 4 HOH A 85 485 16 HOH HOH . D 4 HOH A 86 486 54 HOH HOH . D 4 HOH A 87 487 89 HOH HOH . D 4 HOH A 88 488 29 HOH HOH . D 4 HOH A 89 489 102 HOH HOH . D 4 HOH A 90 490 211 HOH HOH . D 4 HOH A 91 491 352 HOH HOH . D 4 HOH A 92 492 165 HOH HOH . D 4 HOH A 93 493 83 HOH HOH . D 4 HOH A 94 494 58 HOH HOH . D 4 HOH A 95 495 347 HOH HOH . D 4 HOH A 96 496 370 HOH HOH . D 4 HOH A 97 497 129 HOH HOH . D 4 HOH A 98 498 178 HOH HOH . D 4 HOH A 99 499 349 HOH HOH . D 4 HOH A 100 500 82 HOH HOH . D 4 HOH A 101 501 56 HOH HOH . D 4 HOH A 102 502 71 HOH HOH . D 4 HOH A 103 503 339 HOH HOH . D 4 HOH A 104 504 124 HOH HOH . D 4 HOH A 105 505 74 HOH HOH . D 4 HOH A 106 506 23 HOH HOH . D 4 HOH A 107 507 35 HOH HOH . D 4 HOH A 108 508 98 HOH HOH . D 4 HOH A 109 509 50 HOH HOH . D 4 HOH A 110 510 155 HOH HOH . D 4 HOH A 111 511 353 HOH HOH . D 4 HOH A 112 512 342 HOH HOH . D 4 HOH A 113 513 20 HOH HOH . D 4 HOH A 114 514 104 HOH HOH . D 4 HOH A 115 515 96 HOH HOH . D 4 HOH A 116 516 116 HOH HOH . D 4 HOH A 117 517 99 HOH HOH . D 4 HOH A 118 518 73 HOH HOH . D 4 HOH A 119 519 167 HOH HOH . D 4 HOH A 120 520 84 HOH HOH . D 4 HOH A 121 521 166 HOH HOH . D 4 HOH A 122 522 80 HOH HOH . D 4 HOH A 123 523 61 HOH HOH . D 4 HOH A 124 524 346 HOH HOH . D 4 HOH A 125 525 218 HOH HOH . D 4 HOH A 126 526 63 HOH HOH . D 4 HOH A 127 527 203 HOH HOH . D 4 HOH A 128 528 59 HOH HOH . D 4 HOH A 129 529 197 HOH HOH . D 4 HOH A 130 530 49 HOH HOH . D 4 HOH A 131 531 66 HOH HOH . D 4 HOH A 132 532 101 HOH HOH . D 4 HOH A 133 533 10 HOH HOH . D 4 HOH A 134 534 143 HOH HOH . D 4 HOH A 135 535 6 HOH HOH . D 4 HOH A 136 536 358 HOH HOH . D 4 HOH A 137 537 44 HOH HOH . D 4 HOH A 138 538 45 HOH HOH . D 4 HOH A 139 539 62 HOH HOH . D 4 HOH A 140 540 180 HOH HOH . D 4 HOH A 141 541 65 HOH HOH . D 4 HOH A 142 542 322 HOH HOH . D 4 HOH A 143 543 344 HOH HOH . D 4 HOH A 144 544 142 HOH HOH . D 4 HOH A 145 545 357 HOH HOH . D 4 HOH A 146 546 39 HOH HOH . D 4 HOH A 147 547 137 HOH HOH . D 4 HOH A 148 548 76 HOH HOH . D 4 HOH A 149 549 160 HOH HOH . D 4 HOH A 150 550 90 HOH HOH . D 4 HOH A 151 551 356 HOH HOH . D 4 HOH A 152 552 367 HOH HOH . D 4 HOH A 153 553 70 HOH HOH . D 4 HOH A 154 554 55 HOH HOH . D 4 HOH A 155 555 75 HOH HOH . D 4 HOH A 156 556 47 HOH HOH . D 4 HOH A 157 557 130 HOH HOH . D 4 HOH A 158 558 141 HOH HOH . D 4 HOH A 159 559 201 HOH HOH . D 4 HOH A 160 560 185 HOH HOH . D 4 HOH A 161 561 156 HOH HOH . D 4 HOH A 162 562 158 HOH HOH . D 4 HOH A 163 563 364 HOH HOH . D 4 HOH A 164 564 125 HOH HOH . D 4 HOH A 165 565 127 HOH HOH . D 4 HOH A 166 566 3 HOH HOH . D 4 HOH A 167 567 131 HOH HOH . D 4 HOH A 168 568 371 HOH HOH . D 4 HOH A 169 569 340 HOH HOH . D 4 HOH A 170 570 121 HOH HOH . D 4 HOH A 171 571 363 HOH HOH . D 4 HOH A 172 572 337 HOH HOH . D 4 HOH A 173 573 91 HOH HOH . D 4 HOH A 174 574 320 HOH HOH . D 4 HOH A 175 575 161 HOH HOH . D 4 HOH A 176 576 169 HOH HOH . D 4 HOH A 177 577 94 HOH HOH . D 4 HOH A 178 578 355 HOH HOH . D 4 HOH A 179 579 324 HOH HOH . D 4 HOH A 180 580 204 HOH HOH . D 4 HOH A 181 581 361 HOH HOH . D 4 HOH A 182 582 110 HOH HOH . D 4 HOH A 183 583 214 HOH HOH . D 4 HOH A 184 584 213 HOH HOH . D 4 HOH A 185 585 362 HOH HOH . D 4 HOH A 186 586 366 HOH HOH . D 4 HOH A 187 587 159 HOH HOH . D 4 HOH A 188 588 192 HOH HOH . D 4 HOH A 189 589 224 HOH HOH . D 4 HOH A 190 590 333 HOH HOH . D 4 HOH A 191 591 341 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 J4Y . . . C 3 12.854 53.693 21.789 1 23.11 ? N1 J4Y 302 A 1 HETATM 2 C C4 J4Y . . . C 3 14.061 56.85 25.43 1 60.11 ? C4 J4Y 302 A 1 HETATM 3 C C5 J4Y . . . C 3 12.53 56.801 25.441 1 58.03 ? C5 J4Y 302 A 1 HETATM 4 C C6 J4Y . . . C 3 14.822 58.146 25.399 1 71.33 ? C6 J4Y 302 A 1 HETATM 5 C C7 J4Y . . . C 3 16.144 58.187 25.877 1 76.12 ? C7 J4Y 302 A 1 HETATM 6 C C8 J4Y . . . C 3 16.889 59.373 25.84 1 74.61 ? C8 J4Y 302 A 1 HETATM 7 C C10 J4Y . . . C 3 15.038 60.505 24.829 1 74.93 ? C10 J4Y 302 A 1 HETATM 8 N N J4Y . . . C 3 12.812 54.991 22.338 1 27.7 ? N J4Y 302 A 1 HETATM 9 C C J4Y . . . C 3 13.205 55.157 23.586 1 39.28 ? C J4Y 302 A 1 HETATM 10 O O J4Y . . . C 3 13.547 54.219 24.243 1 42.9 ? O J4Y 302 A 1 HETATM 11 C C1 J4Y . . . C 3 13.397 53.53 20.577 1 19.4 ? C1 J4Y 302 A 1 HETATM 12 C C11 J4Y . . . C 3 14.283 59.328 24.87 1 73.68 ? C11 J4Y 302 A 1 HETATM 13 C C2 J4Y . . . C 3 13.601 52.094 20.105 1 14.2 ? C2 J4Y 302 A 1 HETATM 14 C C3 J4Y . . . C 3 13.276 56.566 24.13 1 50.43 ? C3 J4Y 302 A 1 HETATM 15 C C9 J4Y . . . C 3 16.339 60.541 25.318 1 74.31 ? C9 J4Y 302 A 1 HETATM 16 O O1 J4Y . . . C 3 13.852 54.502 20.014 1 17.93 ? O1 J4Y 302 A 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 242 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 16 #