data_5QIT # _model_server_result.job_id nATvTAYWjorwuFxDvmqzbQ _model_server_result.datetime_utc '2024-10-28 02:38:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5qit # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 5QIT # _exptl.entry_id 5QIT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 115.87 _cell.angle_gamma 90 _cell.entry_id 5QIT _cell.length_a 47.289 _cell.length_b 58.436 _cell.length_c 49.713 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5QIT _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 F N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 46 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 51 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C _struct_conn.ptnr2_label_comp_id J5J _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id J5J _struct_conn.ptnr2_auth_seq_id 301 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.671 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # _atom_sites.entry_id 5QIT _atom_sites.fract_transf_matrix[1][1] 0.021147 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.010257 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017113 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022357 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 J5J A 1 301 301 J5J 010 . C 3 EDO A 1 302 501 EDO EDO . D 3 EDO A 1 303 601 EDO EDO . E 4 PEG A 1 304 701 PEG PEG . F 3 EDO A 1 305 801 EDO EDO . G 5 HOH A 1 401 351 HOH HOH . G 5 HOH A 2 402 125 HOH HOH . G 5 HOH A 3 403 112 HOH HOH . G 5 HOH A 4 404 14 HOH HOH . G 5 HOH A 5 405 40 HOH HOH . G 5 HOH A 6 406 344 HOH HOH . G 5 HOH A 7 407 38 HOH HOH . G 5 HOH A 8 408 17 HOH HOH . G 5 HOH A 9 409 189 HOH HOH . G 5 HOH A 10 410 15 HOH HOH . G 5 HOH A 11 411 262 HOH HOH . G 5 HOH A 12 412 19 HOH HOH . G 5 HOH A 13 413 37 HOH HOH . G 5 HOH A 14 414 179 HOH HOH . G 5 HOH A 15 415 157 HOH HOH . G 5 HOH A 16 416 343 HOH HOH . G 5 HOH A 17 417 137 HOH HOH . G 5 HOH A 18 418 79 HOH HOH . G 5 HOH A 19 419 150 HOH HOH . G 5 HOH A 20 420 190 HOH HOH . G 5 HOH A 21 421 111 HOH HOH . G 5 HOH A 22 422 119 HOH HOH . G 5 HOH A 23 423 364 HOH HOH . G 5 HOH A 24 424 154 HOH HOH . G 5 HOH A 25 425 26 HOH HOH . G 5 HOH A 26 426 145 HOH HOH . G 5 HOH A 27 427 43 HOH HOH . G 5 HOH A 28 428 36 HOH HOH . G 5 HOH A 29 429 31 HOH HOH . G 5 HOH A 30 430 105 HOH HOH . G 5 HOH A 31 431 34 HOH HOH . G 5 HOH A 32 432 18 HOH HOH . G 5 HOH A 33 433 74 HOH HOH . G 5 HOH A 34 434 7 HOH HOH . G 5 HOH A 35 435 163 HOH HOH . G 5 HOH A 36 436 170 HOH HOH . G 5 HOH A 37 437 69 HOH HOH . G 5 HOH A 38 438 363 HOH HOH . G 5 HOH A 39 439 83 HOH HOH . G 5 HOH A 40 440 337 HOH HOH . G 5 HOH A 41 441 107 HOH HOH . G 5 HOH A 42 442 122 HOH HOH . G 5 HOH A 43 443 78 HOH HOH . G 5 HOH A 44 444 96 HOH HOH . G 5 HOH A 45 445 12 HOH HOH . G 5 HOH A 46 446 168 HOH HOH . G 5 HOH A 47 447 100 HOH HOH . G 5 HOH A 48 448 64 HOH HOH . G 5 HOH A 49 449 41 HOH HOH . G 5 HOH A 50 450 2 HOH HOH . G 5 HOH A 51 451 135 HOH HOH . G 5 HOH A 52 452 80 HOH HOH . G 5 HOH A 53 453 120 HOH HOH . G 5 HOH A 54 454 52 HOH HOH . G 5 HOH A 55 455 24 HOH HOH . G 5 HOH A 56 456 347 HOH HOH . G 5 HOH A 57 457 58 HOH HOH . G 5 HOH A 58 458 116 HOH HOH . G 5 HOH A 59 459 357 HOH HOH . G 5 HOH A 60 460 339 HOH HOH . G 5 HOH A 61 461 202 HOH HOH . G 5 HOH A 62 462 56 HOH HOH . G 5 HOH A 63 463 108 HOH HOH . G 5 HOH A 64 464 32 HOH HOH . G 5 HOH A 65 465 46 HOH HOH . G 5 HOH A 66 466 27 HOH HOH . G 5 HOH A 67 467 121 HOH HOH . G 5 HOH A 68 468 53 HOH HOH . G 5 HOH A 69 469 42 HOH HOH . G 5 HOH A 70 470 35 HOH HOH . G 5 HOH A 71 471 68 HOH HOH . G 5 HOH A 72 472 1 HOH HOH . G 5 HOH A 73 473 93 HOH HOH . G 5 HOH A 74 474 33 HOH HOH . G 5 HOH A 75 475 85 HOH HOH . G 5 HOH A 76 476 273 HOH HOH . G 5 HOH A 77 477 114 HOH HOH . G 5 HOH A 78 478 178 HOH HOH . G 5 HOH A 79 479 30 HOH HOH . G 5 HOH A 80 480 87 HOH HOH . G 5 HOH A 81 481 341 HOH HOH . G 5 HOH A 82 482 89 HOH HOH . G 5 HOH A 83 483 348 HOH HOH . G 5 HOH A 84 484 84 HOH HOH . G 5 HOH A 85 485 124 HOH HOH . G 5 HOH A 86 486 72 HOH HOH . G 5 HOH A 87 487 164 HOH HOH . G 5 HOH A 88 488 155 HOH HOH . G 5 HOH A 89 489 102 HOH HOH . G 5 HOH A 90 490 97 HOH HOH . G 5 HOH A 91 491 20 HOH HOH . G 5 HOH A 92 492 358 HOH HOH . G 5 HOH A 93 493 13 HOH HOH . G 5 HOH A 94 494 340 HOH HOH . G 5 HOH A 95 495 65 HOH HOH . G 5 HOH A 96 496 101 HOH HOH . G 5 HOH A 97 497 162 HOH HOH . G 5 HOH A 98 498 23 HOH HOH . G 5 HOH A 99 499 67 HOH HOH . G 5 HOH A 100 500 59 HOH HOH . G 5 HOH A 101 501 211 HOH HOH . G 5 HOH A 102 502 148 HOH HOH . G 5 HOH A 103 503 104 HOH HOH . G 5 HOH A 104 504 29 HOH HOH . G 5 HOH A 105 505 99 HOH HOH . G 5 HOH A 106 506 167 HOH HOH . G 5 HOH A 107 507 349 HOH HOH . G 5 HOH A 108 508 71 HOH HOH . G 5 HOH A 109 509 247 HOH HOH . G 5 HOH A 110 510 54 HOH HOH . G 5 HOH A 111 511 60 HOH HOH . G 5 HOH A 112 512 57 HOH HOH . G 5 HOH A 113 513 49 HOH HOH . G 5 HOH A 114 514 218 HOH HOH . G 5 HOH A 115 515 166 HOH HOH . G 5 HOH A 116 516 165 HOH HOH . G 5 HOH A 117 517 61 HOH HOH . G 5 HOH A 118 518 48 HOH HOH . G 5 HOH A 119 519 98 HOH HOH . G 5 HOH A 120 520 103 HOH HOH . G 5 HOH A 121 521 229 HOH HOH . G 5 HOH A 122 522 44 HOH HOH . G 5 HOH A 123 523 47 HOH HOH . G 5 HOH A 124 524 50 HOH HOH . G 5 HOH A 125 525 8 HOH HOH . G 5 HOH A 126 526 323 HOH HOH . G 5 HOH A 127 527 76 HOH HOH . G 5 HOH A 128 528 66 HOH HOH . G 5 HOH A 129 529 21 HOH HOH . G 5 HOH A 130 530 10 HOH HOH . G 5 HOH A 131 531 22 HOH HOH . G 5 HOH A 132 532 82 HOH HOH . G 5 HOH A 133 533 90 HOH HOH . G 5 HOH A 134 534 70 HOH HOH . G 5 HOH A 135 535 146 HOH HOH . G 5 HOH A 136 536 39 HOH HOH . G 5 HOH A 137 537 11 HOH HOH . G 5 HOH A 138 538 55 HOH HOH . G 5 HOH A 139 539 180 HOH HOH . G 5 HOH A 140 540 360 HOH HOH . G 5 HOH A 141 541 356 HOH HOH . G 5 HOH A 142 542 346 HOH HOH . G 5 HOH A 143 543 62 HOH HOH . G 5 HOH A 144 544 6 HOH HOH . G 5 HOH A 145 545 322 HOH HOH . G 5 HOH A 146 546 63 HOH HOH . G 5 HOH A 147 547 16 HOH HOH . G 5 HOH A 148 548 197 HOH HOH . G 5 HOH A 149 549 152 HOH HOH . G 5 HOH A 150 550 160 HOH HOH . G 5 HOH A 151 551 129 HOH HOH . G 5 HOH A 152 552 106 HOH HOH . G 5 HOH A 153 553 75 HOH HOH . G 5 HOH A 154 554 142 HOH HOH . G 5 HOH A 155 555 73 HOH HOH . G 5 HOH A 156 556 151 HOH HOH . G 5 HOH A 157 557 336 HOH HOH . G 5 HOH A 158 558 45 HOH HOH . G 5 HOH A 159 559 361 HOH HOH . G 5 HOH A 160 560 77 HOH HOH . G 5 HOH A 161 561 201 HOH HOH . G 5 HOH A 162 562 158 HOH HOH . G 5 HOH A 163 563 203 HOH HOH . G 5 HOH A 164 564 350 HOH HOH . G 5 HOH A 165 565 355 HOH HOH . G 5 HOH A 166 566 185 HOH HOH . G 5 HOH A 167 567 127 HOH HOH . G 5 HOH A 168 568 131 HOH HOH . G 5 HOH A 169 569 130 HOH HOH . G 5 HOH A 170 570 239 HOH HOH . G 5 HOH A 171 571 342 HOH HOH . G 5 HOH A 172 572 153 HOH HOH . G 5 HOH A 173 573 118 HOH HOH . G 5 HOH A 174 574 169 HOH HOH . G 5 HOH A 175 575 338 HOH HOH . G 5 HOH A 176 576 320 HOH HOH . G 5 HOH A 177 577 213 HOH HOH . G 5 HOH A 178 578 161 HOH HOH . G 5 HOH A 179 579 234 HOH HOH . G 5 HOH A 180 580 335 HOH HOH . G 5 HOH A 181 581 128 HOH HOH . G 5 HOH A 182 582 110 HOH HOH . G 5 HOH A 183 583 353 HOH HOH . G 5 HOH A 184 584 156 HOH HOH . G 5 HOH A 185 585 94 HOH HOH . G 5 HOH A 186 586 109 HOH HOH . G 5 HOH A 187 587 214 HOH HOH . G 5 HOH A 188 588 354 HOH HOH . G 5 HOH A 189 589 324 HOH HOH . G 5 HOH A 190 590 352 HOH HOH . G 5 HOH A 191 591 159 HOH HOH . G 5 HOH A 192 592 173 HOH HOH . G 5 HOH A 193 593 192 HOH HOH . G 5 HOH A 194 594 91 HOH HOH . G 5 HOH A 195 595 359 HOH HOH . G 5 HOH A 196 596 149 HOH HOH . G 5 HOH A 197 597 143 HOH HOH . G 5 HOH A 198 598 333 HOH HOH . G 5 HOH A 199 599 362 HOH HOH . G 5 HOH A 200 600 224 HOH HOH . G 5 HOH A 201 601 321 HOH HOH . G 5 HOH A 202 602 171 HOH HOH . G 5 HOH A 203 603 176 HOH HOH . G 5 HOH A 204 604 204 HOH HOH . G 5 HOH A 205 605 134 HOH HOH . G 5 HOH A 206 606 345 HOH HOH . G 5 HOH A 207 607 183 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 3 20.697 32.086 22.92 1 39.57 ? C1 EDO 302 A 1 HETATM 2 O O1 EDO . . . C 3 21.528 30.96 22.636 1 49.79 ? O1 EDO 302 A 1 HETATM 3 C C2 EDO . . . C 3 19.245 31.878 22.467 1 30.77 ? C2 EDO 302 A 1 HETATM 4 O O2 EDO . . . C 3 18.149 31.95 23.523 1 22.11 ? O2 EDO 302 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #