data_5QOJ # _model_server_result.job_id GNcWgSW_0uwyCMy24FP0Ug _model_server_result.datetime_utc '2024-11-26 04:04:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5qoj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":305}' # _entry.id 5QOJ # _exptl.entry_id 5QOJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5QOJ _cell.length_a 48.66 _cell.length_b 61.14 _cell.length_c 66.64 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5QOJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 278 n n C1 C2 PEG sing 279 n n C1 H11 PEG sing 280 n n C1 H12 PEG sing 281 n n O1 HO1 PEG sing 282 n n C2 O2 PEG sing 283 n n C2 H21 PEG sing 284 n n C2 H22 PEG sing 285 n n O2 C3 PEG sing 286 n n C3 C4 PEG sing 287 n n C3 H31 PEG sing 288 n n C3 H32 PEG sing 289 n n C4 O4 PEG sing 290 n n C4 H41 PEG sing 291 n n C4 H42 PEG sing 292 n n O4 HO4 PEG sing 293 n n # _atom_sites.entry_id 5QOJ _atom_sites.fract_transf_matrix[1][1] 0.020551 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016356 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015006 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 301 2 EDO EDO . C 2 EDO A 1 302 3 EDO EDO . D 3 DMS A 1 303 1 DMS DMS . E 4 ACT A 1 304 1 ACT ACT . F 5 PEG A 1 305 1 PEG PEG . G 6 JG4 A 1 306 1 JG4 LIG . H 7 HOH A 1 401 83 HOH HOH . H 7 HOH A 2 402 55 HOH HOH . H 7 HOH A 3 403 100 HOH HOH . H 7 HOH A 4 404 66 HOH HOH . H 7 HOH A 5 405 39 HOH HOH . H 7 HOH A 6 406 70 HOH HOH . H 7 HOH A 7 407 12 HOH HOH . H 7 HOH A 8 408 10 HOH HOH . H 7 HOH A 9 409 85 HOH HOH . H 7 HOH A 10 410 15 HOH HOH . H 7 HOH A 11 411 38 HOH HOH . H 7 HOH A 12 412 17 HOH HOH . H 7 HOH A 13 413 23 HOH HOH . H 7 HOH A 14 414 68 HOH HOH . H 7 HOH A 15 415 78 HOH HOH . H 7 HOH A 16 416 67 HOH HOH . H 7 HOH A 17 417 60 HOH HOH . H 7 HOH A 18 418 5 HOH HOH . H 7 HOH A 19 419 31 HOH HOH . H 7 HOH A 20 420 102 HOH HOH . H 7 HOH A 21 421 13 HOH HOH . H 7 HOH A 22 422 65 HOH HOH . H 7 HOH A 23 423 1 HOH HOH . H 7 HOH A 24 424 35 HOH HOH . H 7 HOH A 25 425 14 HOH HOH . H 7 HOH A 26 426 7 HOH HOH . H 7 HOH A 27 427 29 HOH HOH . H 7 HOH A 28 428 43 HOH HOH . H 7 HOH A 29 429 4 HOH HOH . H 7 HOH A 30 430 32 HOH HOH . H 7 HOH A 31 431 24 HOH HOH . H 7 HOH A 32 432 71 HOH HOH . H 7 HOH A 33 433 2 HOH HOH . H 7 HOH A 34 434 21 HOH HOH . H 7 HOH A 35 435 90 HOH HOH . H 7 HOH A 36 436 92 HOH HOH . H 7 HOH A 37 437 18 HOH HOH . H 7 HOH A 38 438 95 HOH HOH . H 7 HOH A 39 439 8 HOH HOH . H 7 HOH A 40 440 103 HOH HOH . H 7 HOH A 41 441 3 HOH HOH . H 7 HOH A 42 442 27 HOH HOH . H 7 HOH A 43 443 96 HOH HOH . H 7 HOH A 44 444 30 HOH HOH . H 7 HOH A 45 445 94 HOH HOH . H 7 HOH A 46 446 46 HOH HOH . H 7 HOH A 47 447 86 HOH HOH . H 7 HOH A 48 448 19 HOH HOH . H 7 HOH A 49 449 50 HOH HOH . H 7 HOH A 50 450 47 HOH HOH . H 7 HOH A 51 451 6 HOH HOH . H 7 HOH A 52 452 25 HOH HOH . H 7 HOH A 53 453 9 HOH HOH . H 7 HOH A 54 454 42 HOH HOH . H 7 HOH A 55 455 62 HOH HOH . H 7 HOH A 56 456 16 HOH HOH . H 7 HOH A 57 457 11 HOH HOH . H 7 HOH A 58 458 52 HOH HOH . H 7 HOH A 59 459 81 HOH HOH . H 7 HOH A 60 460 57 HOH HOH . H 7 HOH A 61 461 22 HOH HOH . H 7 HOH A 62 462 28 HOH HOH . H 7 HOH A 63 463 84 HOH HOH . H 7 HOH A 64 464 97 HOH HOH . H 7 HOH A 65 465 40 HOH HOH . H 7 HOH A 66 466 75 HOH HOH . H 7 HOH A 67 467 69 HOH HOH . H 7 HOH A 68 468 72 HOH HOH . H 7 HOH A 69 469 36 HOH HOH . H 7 HOH A 70 470 101 HOH HOH . H 7 HOH A 71 471 26 HOH HOH . H 7 HOH A 72 472 110 HOH HOH . H 7 HOH A 73 473 98 HOH HOH . H 7 HOH A 74 474 20 HOH HOH . H 7 HOH A 75 475 56 HOH HOH . H 7 HOH A 76 476 51 HOH HOH . H 7 HOH A 77 477 41 HOH HOH . H 7 HOH A 78 478 93 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . F 5 -40.835 20.75 80.563 1 64.94 ? C1 PEG 305 A 1 HETATM 2 O O1 PEG . . . F 5 -42.151 21.28 80.372 1 63.36 ? O1 PEG 305 A 1 HETATM 3 C C2 PEG . . . F 5 -40.468 20.698 82.043 1 63.25 ? C2 PEG 305 A 1 HETATM 4 O O2 PEG . . . F 5 -39.448 19.706 82.035 1 77.62 ? O2 PEG 305 A 1 HETATM 5 C C3 PEG . . . F 5 -39.098 19.108 83.272 1 78.98 ? C3 PEG 305 A 1 HETATM 6 C C4 PEG . . . F 5 -37.609 18.765 83.204 1 84.72 ? C4 PEG 305 A 1 HETATM 7 O O4 PEG . . . F 5 -37.031 18.573 84.521 1 78.09 ? O4 PEG 305 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 7 #