data_5QOK
#
_model_server_result.job_id            G2zDRA_1xRok-ZboW8QQXQ 
_model_server_result.datetime_utc      '2025-02-16 22:20:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5qok 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":306}' 
#
_entry.id    5QOK 
#
_exptl.entry_id    5QOK 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              233.263 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            8-[(dimethylamino)methyl]-4-methyl-7-oxidanyl-chromen-2-one 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5QOK 
_cell.length_a            48.16 
_cell.length_b            61.09 
_cell.length_c            65.73 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5QOK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C13 H15 N O3' 
_chem_comp.formula_weight    233.263 
_chem_comp.id                AWS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              8-[(dimethylamino)methyl]-4-methyl-7-oxidanyl-chromen-2-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C12 N1 AWS sing 76 n n 
C13 N1 AWS sing 77 n n 
C8 C7 AWS doub 78 n y 
C8 C9 AWS sing 79 n y 
O3 C9 AWS sing 80 n n 
C7 C6 AWS sing 81 n y 
N1 C11 AWS sing 82 n n 
C9 C10 AWS doub 83 n y 
C6 C5 AWS doub 84 n y 
C6 C2 AWS sing 85 n n 
C10 C5 AWS sing 86 n y 
C10 C11 AWS sing 87 n n 
C1 C2 AWS sing 88 n n 
C5 O2 AWS sing 89 n n 
C2 C3 AWS doub 90 n n 
C3 C4 AWS sing 91 n n 
O2 C4 AWS sing 92 n n 
C4 O1 AWS doub 93 n n 
C7 H2 AWS sing 94 n n 
C8 H3 AWS sing 95 n n 
C13 H4 AWS sing 96 n n 
C13 H5 AWS sing 97 n n 
C13 H6 AWS sing 98 n n 
C1 H7 AWS sing 99 n n 
C1 H8 AWS sing 100 n n 
C1 H9 AWS sing 101 n n 
C3 H10 AWS sing 102 n n 
C11 H11 AWS sing 103 n n 
C11 H12 AWS sing 104 n n 
C12 H13 AWS sing 105 n n 
C12 H14 AWS sing 106 n n 
C12 H15 AWS sing 107 n n 
O3 H16 AWS sing 108 n n 
#
_atom_sites.entry_id                     5QOK 
_atom_sites.fract_transf_matrix[1][1]    0.020764 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016369 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015214 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 EDO A 1 301 3 EDO EDO . 
C 3 DMS A 1 302 1 DMS DMS . 
D 4 ACT A 1 303 1 ACT ACT . 
E 4 ACT A 1 304 2 ACT ACT . 
F 5 PEG A 1 305 1 PEG PEG . 
G 6 AWS A 1 306 1 AWS LIG . 
H 7 HOH A 1 401 65 HOH HOH . 
H 7 HOH A 2 402 100 HOH HOH . 
H 7 HOH A 3 403 85 HOH HOH . 
H 7 HOH A 4 404 28 HOH HOH . 
H 7 HOH A 5 405 38 HOH HOH . 
H 7 HOH A 6 406 70 HOH HOH . 
H 7 HOH A 7 407 43 HOH HOH . 
H 7 HOH A 8 408 71 HOH HOH . 
H 7 HOH A 9 409 23 HOH HOH . 
H 7 HOH A 10 410 17 HOH HOH . 
H 7 HOH A 11 411 1 HOH HOH . 
H 7 HOH A 12 412 102 HOH HOH . 
H 7 HOH A 13 413 2 HOH HOH . 
H 7 HOH A 14 414 32 HOH HOH . 
H 7 HOH A 15 415 13 HOH HOH . 
H 7 HOH A 16 416 7 HOH HOH . 
H 7 HOH A 17 417 3 HOH HOH . 
H 7 HOH A 18 418 5 HOH HOH . 
H 7 HOH A 19 419 83 HOH HOH . 
H 7 HOH A 20 420 78 HOH HOH . 
H 7 HOH A 21 421 11 HOH HOH . 
H 7 HOH A 22 422 80 HOH HOH . 
H 7 HOH A 23 423 4 HOH HOH . 
H 7 HOH A 24 424 24 HOH HOH . 
H 7 HOH A 25 425 22 HOH HOH . 
H 7 HOH A 26 426 60 HOH HOH . 
H 7 HOH A 27 427 76 HOH HOH . 
H 7 HOH A 28 428 27 HOH HOH . 
H 7 HOH A 29 429 68 HOH HOH . 
H 7 HOH A 30 430 94 HOH HOH . 
H 7 HOH A 31 431 86 HOH HOH . 
H 7 HOH A 32 432 10 HOH HOH . 
H 7 HOH A 33 433 35 HOH HOH . 
H 7 HOH A 34 434 79 HOH HOH . 
H 7 HOH A 35 435 50 HOH HOH . 
H 7 HOH A 36 436 14 HOH HOH . 
H 7 HOH A 37 437 20 HOH HOH . 
H 7 HOH A 38 438 30 HOH HOH . 
H 7 HOH A 39 439 25 HOH HOH . 
H 7 HOH A 40 440 8 HOH HOH . 
H 7 HOH A 41 441 29 HOH HOH . 
H 7 HOH A 42 442 74 HOH HOH . 
H 7 HOH A 43 443 31 HOH HOH . 
H 7 HOH A 44 444 69 HOH HOH . 
H 7 HOH A 45 445 92 HOH HOH . 
H 7 HOH A 46 446 91 HOH HOH . 
H 7 HOH A 47 447 18 HOH HOH . 
H 7 HOH A 48 448 72 HOH HOH . 
H 7 HOH A 49 449 6 HOH HOH . 
H 7 HOH A 50 450 90 HOH HOH . 
H 7 HOH A 51 451 40 HOH HOH . 
H 7 HOH A 52 452 101 HOH HOH . 
H 7 HOH A 53 453 42 HOH HOH . 
H 7 HOH A 54 454 107 HOH HOH . 
H 7 HOH A 55 455 75 HOH HOH . 
H 7 HOH A 56 456 57 HOH HOH . 
H 7 HOH A 57 457 103 HOH HOH . 
H 7 HOH A 58 458 33 HOH HOH . 
H 7 HOH A 59 459 106 HOH HOH . 
H 7 HOH A 60 460 26 HOH HOH . 
H 7 HOH A 61 461 56 HOH HOH . 
H 7 HOH A 62 462 105 HOH HOH . 
H 7 HOH A 63 463 41 HOH HOH . 
H 7 HOH A 64 464 98 HOH HOH . 
H 7 HOH A 65 465 47 HOH HOH . 
H 7 HOH A 66 466 51 HOH HOH . 
H 7 HOH A 67 467 93 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 AWS . . . G 6 -38.374 4.53 93.679 0.58 38.93 ? N1 AWS 306 A 1 
HETATM 2 C C4 AWS . . . G 6 -37.139 9.054 94.522 0.58 40.88 ? C4 AWS 306 A 1 
HETATM 3 C C5 AWS . . . G 6 -39.018 7.906 93.521 0.58 39.39 ? C5 AWS 306 A 1 
HETATM 4 C C6 AWS . . . G 6 -39.894 8.969 93.79 0.58 38.96 ? C6 AWS 306 A 1 
HETATM 5 C C7 AWS . . . G 6 -41.242 8.842 93.442 0.58 39.09 ? C7 AWS 306 A 1 
HETATM 6 C C8 AWS . . . G 6 -41.709 7.693 92.84 0.58 39.11 ? C8 AWS 306 A 1 
HETATM 7 C C10 AWS . . . G 6 -39.474 6.721 92.919 0.58 39.65 ? C10 AWS 306 A 1 
HETATM 8 C C13 AWS . . . G 6 -39.656 4.129 94.322 0.58 38.92 ? C13 AWS 306 A 1 
HETATM 9 C C1 AWS . . . G 6 -40.155 11.424 94.537 0.58 39.92 ? C1 AWS 306 A 1 
HETATM 10 C C2 AWS . . . G 6 -39.346 10.159 94.428 0.58 39.92 ? C2 AWS 306 A 1 
HETATM 11 C C3 AWS . . . G 6 -38.062 10.114 94.917 0.58 39.86 ? C3 AWS 306 A 1 
HETATM 12 O O1 AWS . . . G 6 -35.949 9.06 94.711 0.58 41.24 ? O1 AWS 306 A 1 
HETATM 13 O O2 AWS . . . G 6 -37.649 7.965 93.856 0.58 41.15 ? O2 AWS 306 A 1 
HETATM 14 C C9 AWS . . . G 6 -40.831 6.639 92.57 0.58 39.65 ? C9 AWS 306 A 1 
HETATM 15 C C11 AWS . . . G 6 -38.539 5.577 92.601 0.58 39.94 ? C11 AWS 306 A 1 
HETATM 16 C C12 AWS . . . G 6 -37.351 4.895 94.699 0.58 39.11 ? C12 AWS 306 A 1 
HETATM 17 O O3 AWS . . . G 6 -41.326 5.527 91.984 0.58 40.2 ? O3 AWS 306 A 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           324 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           17 
#