data_5QOP # _model_server_result.job_id hE6oOK5eFAIQFLKErpYubA _model_server_result.datetime_utc '2024-11-28 10:05:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5qop # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":306}' # _entry.id 5QOP # _exptl.entry_id 5QOP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 233.306 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (azepan-1-yl)(4-methoxyphenyl)methanone _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5QOP _cell.length_a 49.213 _cell.length_b 61.097 _cell.length_c 65.856 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5QOP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H19 N O2' _chem_comp.formula_weight 233.306 _chem_comp.id LDD _chem_comp.mon_nstd_flag . _chem_comp.name (azepan-1-yl)(4-methoxyphenyl)methanone _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O2 C8 LDD doub 197 n n C4 C3 LDD doub 198 n y C4 C5 LDD sing 199 n y C3 C2 LDD sing 200 n y C13 C14 LDD sing 201 n n C13 C12 LDD sing 202 n n C8 C5 LDD sing 203 n n C8 N1 LDD sing 204 n n C1 O1 LDD sing 205 n n C5 C6 LDD doub 206 n y C14 N1 LDD sing 207 n n C2 O1 LDD sing 208 n n C2 C7 LDD doub 209 n y C12 C11 LDD sing 210 n n N1 C9 LDD sing 211 n n C6 C7 LDD sing 212 n y C11 C10 LDD sing 213 n n C9 C10 LDD sing 214 n n C4 H1 LDD sing 215 n n C6 H2 LDD sing 216 n n C7 H3 LDD sing 217 n n C10 H4 LDD sing 218 n n C10 H5 LDD sing 219 n n C13 H6 LDD sing 220 n n C13 H7 LDD sing 221 n n C1 H8 LDD sing 222 n n C1 H9 LDD sing 223 n n C1 H10 LDD sing 224 n n C11 H11 LDD sing 225 n n C11 H12 LDD sing 226 n n C12 H13 LDD sing 227 n n C12 H14 LDD sing 228 n n C14 H15 LDD sing 229 n n C14 H16 LDD sing 230 n n C3 H17 LDD sing 231 n n C9 H18 LDD sing 232 n n C9 H19 LDD sing 233 n n # _atom_sites.entry_id 5QOP _atom_sites.fract_transf_matrix[1][1] 0.02032 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016367 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015185 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 301 2 EDO EDO . C 2 EDO A 1 302 3 EDO EDO . D 3 DMS A 1 303 1 DMS DMS . E 4 ACT A 1 304 1 ACT ACT . F 4 ACT A 1 305 2 ACT ACT . G 5 LDD A 1 306 1 LDD LIG . H 6 HOH A 1 401 83 HOH HOH . H 6 HOH A 2 402 70 HOH HOH . H 6 HOH A 3 403 12 HOH HOH . H 6 HOH A 4 404 15 HOH HOH . H 6 HOH A 5 405 23 HOH HOH . H 6 HOH A 6 406 60 HOH HOH . H 6 HOH A 7 407 8 HOH HOH . H 6 HOH A 8 408 71 HOH HOH . H 6 HOH A 9 409 10 HOH HOH . H 6 HOH A 10 410 88 HOH HOH . H 6 HOH A 11 411 96 HOH HOH . H 6 HOH A 12 412 102 HOH HOH . H 6 HOH A 13 413 39 HOH HOH . H 6 HOH A 14 414 31 HOH HOH . H 6 HOH A 15 415 67 HOH HOH . H 6 HOH A 16 416 90 HOH HOH . H 6 HOH A 17 417 32 HOH HOH . H 6 HOH A 18 418 13 HOH HOH . H 6 HOH A 19 419 110 HOH HOH . H 6 HOH A 20 420 17 HOH HOH . H 6 HOH A 21 421 78 HOH HOH . H 6 HOH A 22 422 66 HOH HOH . H 6 HOH A 23 423 24 HOH HOH . H 6 HOH A 24 424 38 HOH HOH . H 6 HOH A 25 425 18 HOH HOH . H 6 HOH A 26 426 35 HOH HOH . H 6 HOH A 27 427 57 HOH HOH . H 6 HOH A 28 428 68 HOH HOH . H 6 HOH A 29 429 100 HOH HOH . H 6 HOH A 30 430 29 HOH HOH . H 6 HOH A 31 431 55 HOH HOH . H 6 HOH A 32 432 6 HOH HOH . H 6 HOH A 33 433 43 HOH HOH . H 6 HOH A 34 434 76 HOH HOH . H 6 HOH A 35 435 2 HOH HOH . H 6 HOH A 36 436 22 HOH HOH . H 6 HOH A 37 437 30 HOH HOH . H 6 HOH A 38 438 9 HOH HOH . H 6 HOH A 39 439 5 HOH HOH . H 6 HOH A 40 440 50 HOH HOH . H 6 HOH A 41 441 1 HOH HOH . H 6 HOH A 42 442 33 HOH HOH . H 6 HOH A 43 443 14 HOH HOH . H 6 HOH A 44 444 42 HOH HOH . H 6 HOH A 45 445 7 HOH HOH . H 6 HOH A 46 446 95 HOH HOH . H 6 HOH A 47 447 59 HOH HOH . H 6 HOH A 48 448 4 HOH HOH . H 6 HOH A 49 449 3 HOH HOH . H 6 HOH A 50 450 79 HOH HOH . H 6 HOH A 51 451 94 HOH HOH . H 6 HOH A 52 452 27 HOH HOH . H 6 HOH A 53 453 65 HOH HOH . H 6 HOH A 54 454 103 HOH HOH . H 6 HOH A 55 455 46 HOH HOH . H 6 HOH A 56 456 19 HOH HOH . H 6 HOH A 57 457 69 HOH HOH . H 6 HOH A 58 458 52 HOH HOH . H 6 HOH A 59 459 84 HOH HOH . H 6 HOH A 60 460 40 HOH HOH . H 6 HOH A 61 461 72 HOH HOH . H 6 HOH A 62 462 16 HOH HOH . H 6 HOH A 63 463 36 HOH HOH . H 6 HOH A 64 464 25 HOH HOH . H 6 HOH A 65 465 97 HOH HOH . H 6 HOH A 66 466 47 HOH HOH . H 6 HOH A 67 467 11 HOH HOH . H 6 HOH A 68 468 28 HOH HOH . H 6 HOH A 69 469 21 HOH HOH . H 6 HOH A 70 470 75 HOH HOH . H 6 HOH A 71 471 105 HOH HOH . H 6 HOH A 72 472 26 HOH HOH . H 6 HOH A 73 473 101 HOH HOH . H 6 HOH A 74 474 106 HOH HOH . H 6 HOH A 75 475 86 HOH HOH . H 6 HOH A 76 476 92 HOH HOH . H 6 HOH A 77 477 98 HOH HOH . H 6 HOH A 78 478 107 HOH HOH . H 6 HOH A 79 479 51 HOH HOH . H 6 HOH A 80 480 20 HOH HOH . H 6 HOH A 81 481 62 HOH HOH . H 6 HOH A 82 482 56 HOH HOH . H 6 HOH A 83 483 41 HOH HOH . H 6 HOH A 84 484 93 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 LDD . . . G 5 -39.322 19.119 81.469 0.66 26.33 ? N1 LDD 306 A 1 HETATM 2 C C4 LDD . . . G 5 -36.051 19.362 79.856 0.66 29.8 ? C4 LDD 306 A 1 HETATM 3 C C5 LDD . . . G 5 -36.936 18.84 80.803 0.66 27.98 ? C5 LDD 306 A 1 HETATM 4 C C6 LDD . . . G 5 -36.397 18.306 81.974 0.66 29.51 ? C6 LDD 306 A 1 HETATM 5 C C7 LDD . . . G 5 -35.033 18.32 82.211 0.66 30.63 ? C7 LDD 306 A 1 HETATM 6 C C8 LDD . . . G 5 -38.419 18.82 80.509 0.66 26.96 ? C8 LDD 306 A 1 HETATM 7 C C10 LDD . . . G 5 -40.033 20.844 83.154 0.66 28.97 ? C10 LDD 306 A 1 HETATM 8 C C13 LDD . . . G 5 -41.408 19.998 80.397 0.66 28.29 ? C13 LDD 306 A 1 HETATM 9 C C1 LDD . . . G 5 -31.878 19.256 80.614 0.66 35.23 ? C1 LDD 306 A 1 HETATM 10 C C11 LDD . . . G 5 -40.485 21.721 82.003 0.66 28.16 ? C11 LDD 306 A 1 HETATM 11 C C12 LDD . . . G 5 -41.703 21.202 81.263 0.66 27.94 ? C12 LDD 306 A 1 HETATM 12 C C14 LDD . . . G 5 -40.735 18.858 81.15 0.66 25.83 ? C14 LDD 306 A 1 HETATM 13 C C2 LDD . . . G 5 -34.166 18.845 81.259 0.66 30.98 ? C2 LDD 306 A 1 HETATM 14 C C3 LDD . . . G 5 -34.683 19.362 80.072 0.66 28.04 ? C3 LDD 306 A 1 HETATM 15 C C9 LDD . . . G 5 -39.044 19.748 82.77 0.66 26.61 ? C9 LDD 306 A 1 HETATM 16 O O1 LDD . . . G 5 -32.832 18.818 81.583 0.66 32.87 ? O1 LDD 306 A 1 HETATM 17 O O2 LDD . . . G 5 -38.785 18.524 79.367 0.66 25.91 ? O2 LDD 306 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 363 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 17 #