data_5QOT # _model_server_result.job_id AiP27bFR4dNpviMM4HVe5Q _model_server_result.datetime_utc '2024-10-19 19:23:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5qot # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":306}' # _entry.id 5QOT # _exptl.entry_id 5QOT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 269.223 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-(difluoromethyl)-N-[(4-fluorophenyl)methyl]-1H-pyrazole-3-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5QOT _cell.length_a 47.956 _cell.length_b 60.468 _cell.length_c 65.205 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5QOT _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C12 H10 F3 N3 O' _chem_comp.formula_weight 269.223 _chem_comp.id LEJ _chem_comp.mon_nstd_flag . _chem_comp.name 1-(difluoromethyl)-N-[(4-fluorophenyl)methyl]-1H-pyrazole-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F1 C1 LEJ sing 197 n n C1 F2 LEJ sing 198 n n C1 N1 LEJ sing 199 n n N1 C2 LEJ sing 200 n y N1 N2 LEJ sing 201 n y C2 C3 LEJ doub 202 n y N2 C4 LEJ doub 203 n y C3 C4 LEJ sing 204 n y C4 C5 LEJ sing 205 n n C5 N3 LEJ sing 206 n n C5 O1 LEJ doub 207 n n N3 C6 LEJ sing 208 n n C6 C7 LEJ sing 209 n n C7 C8 LEJ doub 210 n y C7 C12 LEJ sing 211 n y C8 C9 LEJ sing 212 n y C12 C11 LEJ doub 213 n y C9 C10 LEJ doub 214 n y C11 C10 LEJ sing 215 n y C10 F3 LEJ sing 216 n n N3 H1 LEJ sing 217 n n C6 H2 LEJ sing 218 n n C6 H3 LEJ sing 219 n n C8 H4 LEJ sing 220 n n C1 H5 LEJ sing 221 n n C11 H6 LEJ sing 222 n n C12 H7 LEJ sing 223 n n C2 H8 LEJ sing 224 n n C3 H9 LEJ sing 225 n n C9 H10 LEJ sing 226 n n # _atom_sites.entry_id 5QOT _atom_sites.fract_transf_matrix[1][1] 0.020852 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016538 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015336 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 301 2 EDO EDO . C 2 EDO A 1 302 3 EDO EDO . D 3 DMS A 1 303 1 DMS DMS . E 4 ACT A 1 304 1 ACT ACT . F 4 ACT A 1 305 2 ACT ACT . G 5 LEJ A 1 306 1 LEJ LIG . H 6 HOH A 1 401 83 HOH HOH . H 6 HOH A 2 402 19 HOH HOH . H 6 HOH A 3 403 70 HOH HOH . H 6 HOH A 4 404 12 HOH HOH . H 6 HOH A 5 405 66 HOH HOH . H 6 HOH A 6 406 60 HOH HOH . H 6 HOH A 7 407 96 HOH HOH . H 6 HOH A 8 408 17 HOH HOH . H 6 HOH A 9 409 8 HOH HOH . H 6 HOH A 10 410 23 HOH HOH . H 6 HOH A 11 411 90 HOH HOH . H 6 HOH A 12 412 16 HOH HOH . H 6 HOH A 13 413 67 HOH HOH . H 6 HOH A 14 414 68 HOH HOH . H 6 HOH A 15 415 10 HOH HOH . H 6 HOH A 16 416 38 HOH HOH . H 6 HOH A 17 417 101 HOH HOH . H 6 HOH A 18 418 95 HOH HOH . H 6 HOH A 19 419 71 HOH HOH . H 6 HOH A 20 420 39 HOH HOH . H 6 HOH A 21 421 78 HOH HOH . H 6 HOH A 22 422 88 HOH HOH . H 6 HOH A 23 423 13 HOH HOH . H 6 HOH A 24 424 31 HOH HOH . H 6 HOH A 25 425 14 HOH HOH . H 6 HOH A 26 426 46 HOH HOH . H 6 HOH A 27 427 15 HOH HOH . H 6 HOH A 28 428 81 HOH HOH . H 6 HOH A 29 429 85 HOH HOH . H 6 HOH A 30 430 76 HOH HOH . H 6 HOH A 31 431 1 HOH HOH . H 6 HOH A 32 432 32 HOH HOH . H 6 HOH A 33 433 2 HOH HOH . H 6 HOH A 34 434 100 HOH HOH . H 6 HOH A 35 435 24 HOH HOH . H 6 HOH A 36 436 79 HOH HOH . H 6 HOH A 37 437 4 HOH HOH . H 6 HOH A 38 438 35 HOH HOH . H 6 HOH A 39 439 103 HOH HOH . H 6 HOH A 40 440 29 HOH HOH . H 6 HOH A 41 441 5 HOH HOH . H 6 HOH A 42 442 3 HOH HOH . H 6 HOH A 43 443 80 HOH HOH . H 6 HOH A 44 444 106 HOH HOH . H 6 HOH A 45 445 18 HOH HOH . H 6 HOH A 46 446 94 HOH HOH . H 6 HOH A 47 447 6 HOH HOH . H 6 HOH A 48 448 27 HOH HOH . H 6 HOH A 49 449 7 HOH HOH . H 6 HOH A 50 450 55 HOH HOH . H 6 HOH A 51 451 65 HOH HOH . H 6 HOH A 52 452 50 HOH HOH . H 6 HOH A 53 453 59 HOH HOH . H 6 HOH A 54 454 9 HOH HOH . H 6 HOH A 55 455 84 HOH HOH . H 6 HOH A 56 456 57 HOH HOH . H 6 HOH A 57 457 74 HOH HOH . H 6 HOH A 58 458 11 HOH HOH . H 6 HOH A 59 459 43 HOH HOH . H 6 HOH A 60 460 42 HOH HOH . H 6 HOH A 61 461 102 HOH HOH . H 6 HOH A 62 462 33 HOH HOH . H 6 HOH A 63 463 21 HOH HOH . H 6 HOH A 64 464 28 HOH HOH . H 6 HOH A 65 465 47 HOH HOH . H 6 HOH A 66 466 36 HOH HOH . H 6 HOH A 67 467 69 HOH HOH . H 6 HOH A 68 468 62 HOH HOH . H 6 HOH A 69 469 97 HOH HOH . H 6 HOH A 70 470 72 HOH HOH . H 6 HOH A 71 471 105 HOH HOH . H 6 HOH A 72 472 30 HOH HOH . H 6 HOH A 73 473 22 HOH HOH . H 6 HOH A 74 474 25 HOH HOH . H 6 HOH A 75 475 75 HOH HOH . H 6 HOH A 76 476 52 HOH HOH . H 6 HOH A 77 477 92 HOH HOH . H 6 HOH A 78 478 40 HOH HOH . H 6 HOH A 79 479 26 HOH HOH . H 6 HOH A 80 480 86 HOH HOH . H 6 HOH A 81 481 51 HOH HOH . H 6 HOH A 82 482 98 HOH HOH . H 6 HOH A 83 483 20 HOH HOH . H 6 HOH A 84 484 56 HOH HOH . H 6 HOH A 85 485 93 HOH HOH . H 6 HOH A 86 486 41 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 LEJ . . . G 5 -37.135 23.957 75.43 0.46 56.46 ? N1 LEJ 306 A 1 HETATM 2 N N3 LEJ . . . G 5 -39.61 21.556 77.737 0.46 55.8 ? N3 LEJ 306 A 1 HETATM 3 C C4 LEJ . . . G 5 -37.53 22.324 76.792 0.46 61.24 ? C4 LEJ 306 A 1 HETATM 4 C C5 LEJ . . . G 5 -38.302 21.309 77.558 0.46 61.1 ? C5 LEJ 306 A 1 HETATM 5 C C6 LEJ . . . G 5 -40.498 20.6 78.394 0.46 53.84 ? C6 LEJ 306 A 1 HETATM 6 C C7 LEJ . . . G 5 -40.138 20.36 79.841 0.46 49.62 ? C7 LEJ 306 A 1 HETATM 7 C C8 LEJ . . . G 5 -39.759 19.103 80.288 0.46 49.19 ? C8 LEJ 306 A 1 HETATM 8 C C10 LEJ . . . G 5 -39.488 19.946 82.484 0.46 47.89 ? C10 LEJ 306 A 1 HETATM 9 C C1 LEJ . . . G 5 -37.455 25.047 74.518 0.46 56.83 ? C1 LEJ 306 A 1 HETATM 10 C C11 LEJ . . . G 5 -39.853 21.199 82.09 0.46 46.77 ? C11 LEJ 306 A 1 HETATM 11 C C12 LEJ . . . G 5 -40.183 21.394 80.758 0.46 48.39 ? C12 LEJ 306 A 1 HETATM 12 C C2 LEJ . . . G 5 -35.919 23.523 75.849 0.46 56.94 ? C2 LEJ 306 A 1 HETATM 13 C C3 LEJ . . . G 5 -36.139 22.487 76.709 0.46 56.39 ? C3 LEJ 306 A 1 HETATM 14 C C9 LEJ . . . G 5 -39.424 18.888 81.617 0.46 49.11 ? C9 LEJ 306 A 1 HETATM 15 F F1 LEJ . . . G 5 -38.321 24.635 73.592 0.46 54.5 ? F1 LEJ 306 A 1 HETATM 16 F F2 LEJ . . . G 5 -38.052 26.057 75.161 0.46 56.13 ? F2 LEJ 306 A 1 HETATM 17 F F3 LEJ . . . G 5 -39.157 19.752 83.792 0.46 45.49 ? F3 LEJ 306 A 1 HETATM 18 N N2 LEJ . . . G 5 -38.132 23.225 76 0.46 60.79 ? N2 LEJ 306 A 1 HETATM 19 O O1 LEJ . . . G 5 -37.753 20.269 77.959 0.46 65.16 ? O1 LEJ 306 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 350 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 19 #