data_5QP2
#
_model_server_result.job_id            HpeEeGGYhkrkqLfl8vx4fw 
_model_server_result.datetime_utc      '2025-01-10 08:07:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5qp2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":306}' 
#
_entry.id    5QP2 
#
_exptl.entry_id    5QP2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              265.24 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-[(4-fluorophenyl)methyl]-5-(methoxymethyl)-1,2,4-oxadiazole-3-carboxamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5QP2 
_cell.length_a            47.811 
_cell.length_b            60.694 
_cell.length_c            65.267 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5QP2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C12 H12 F N3 O3' 
_chem_comp.formula_weight    265.24 
_chem_comp.id                LHS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-[(4-fluorophenyl)methyl]-5-(methoxymethyl)-1,2,4-oxadiazole-3-carboxamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 LHS sing 218 n n 
O1 C2 LHS sing 219 n n 
C2 C3 LHS sing 220 n n 
O2 C3 LHS sing 221 n y 
O2 N2 LHS sing 222 n y 
C3 N1 LHS doub 223 n y 
N2 C4 LHS doub 224 n y 
N1 C4 LHS sing 225 n y 
C4 C5 LHS sing 226 n n 
C5 N3 LHS sing 227 n n 
C5 O3 LHS doub 228 n n 
N3 C6 LHS sing 229 n n 
C6 C7 LHS sing 230 n n 
C7 C12 LHS doub 231 n y 
C7 C8 LHS sing 232 n y 
C12 C11 LHS sing 233 n y 
C8 C9 LHS doub 234 n y 
C11 C10 LHS doub 235 n y 
C9 C10 LHS sing 236 n y 
C10 F1 LHS sing 237 n n 
N3 H1 LHS sing 238 n n 
C6 H2 LHS sing 239 n n 
C6 H3 LHS sing 240 n n 
C8 H4 LHS sing 241 n n 
C1 H5 LHS sing 242 n n 
C1 H6 LHS sing 243 n n 
C1 H7 LHS sing 244 n n 
C11 H8 LHS sing 245 n n 
C12 H9 LHS sing 246 n n 
C2 H10 LHS sing 247 n n 
C2 H11 LHS sing 248 n n 
C9 H12 LHS sing 249 n n 
#
_atom_sites.entry_id                     5QP2 
_atom_sites.fract_transf_matrix[1][1]    0.020916 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016476 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015322 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 EDO A 1 301 2 EDO EDO . 
C 2 EDO A 1 302 3 EDO EDO . 
D 3 DMS A 1 303 1 DMS DMS . 
E 4 ACT A 1 304 1 ACT ACT . 
F 4 ACT A 1 305 2 ACT ACT . 
G 5 LHS A 1 306 1 LHS LIG . 
H 6 HOH A 1 401 100 HOH HOH . 
H 6 HOH A 2 402 10 HOH HOH . 
H 6 HOH A 3 403 66 HOH HOH . 
H 6 HOH A 4 404 60 HOH HOH . 
H 6 HOH A 5 405 29 HOH HOH . 
H 6 HOH A 6 406 17 HOH HOH . 
H 6 HOH A 7 407 78 HOH HOH . 
H 6 HOH A 8 408 88 HOH HOH . 
H 6 HOH A 9 409 8 HOH HOH . 
H 6 HOH A 10 410 96 HOH HOH . 
H 6 HOH A 11 411 38 HOH HOH . 
H 6 HOH A 12 412 18 HOH HOH . 
H 6 HOH A 13 413 23 HOH HOH . 
H 6 HOH A 14 414 90 HOH HOH . 
H 6 HOH A 15 415 13 HOH HOH . 
H 6 HOH A 16 416 4 HOH HOH . 
H 6 HOH A 17 417 68 HOH HOH . 
H 6 HOH A 18 418 33 HOH HOH . 
H 6 HOH A 19 419 12 HOH HOH . 
H 6 HOH A 20 420 76 HOH HOH . 
H 6 HOH A 21 421 81 HOH HOH . 
H 6 HOH A 22 422 14 HOH HOH . 
H 6 HOH A 23 423 31 HOH HOH . 
H 6 HOH A 24 424 32 HOH HOH . 
H 6 HOH A 25 425 1 HOH HOH . 
H 6 HOH A 26 426 16 HOH HOH . 
H 6 HOH A 27 427 24 HOH HOH . 
H 6 HOH A 28 428 39 HOH HOH . 
H 6 HOH A 29 429 15 HOH HOH . 
H 6 HOH A 30 430 5 HOH HOH . 
H 6 HOH A 31 431 71 HOH HOH . 
H 6 HOH A 32 432 2 HOH HOH . 
H 6 HOH A 33 433 6 HOH HOH . 
H 6 HOH A 34 434 35 HOH HOH . 
H 6 HOH A 35 435 50 HOH HOH . 
H 6 HOH A 36 436 43 HOH HOH . 
H 6 HOH A 37 437 11 HOH HOH . 
H 6 HOH A 38 438 9 HOH HOH . 
H 6 HOH A 39 439 7 HOH HOH . 
H 6 HOH A 40 440 3 HOH HOH . 
H 6 HOH A 41 441 57 HOH HOH . 
H 6 HOH A 42 442 59 HOH HOH . 
H 6 HOH A 43 443 46 HOH HOH . 
H 6 HOH A 44 444 79 HOH HOH . 
H 6 HOH A 45 445 65 HOH HOH . 
H 6 HOH A 46 446 27 HOH HOH . 
H 6 HOH A 47 447 30 HOH HOH . 
H 6 HOH A 48 448 97 HOH HOH . 
H 6 HOH A 49 449 69 HOH HOH . 
H 6 HOH A 50 450 72 HOH HOH . 
H 6 HOH A 51 451 84 HOH HOH . 
H 6 HOH A 52 452 25 HOH HOH . 
H 6 HOH A 53 453 101 HOH HOH . 
H 6 HOH A 54 454 21 HOH HOH . 
H 6 HOH A 55 455 42 HOH HOH . 
H 6 HOH A 56 456 47 HOH HOH . 
H 6 HOH A 57 457 19 HOH HOH . 
H 6 HOH A 58 458 94 HOH HOH . 
H 6 HOH A 59 459 105 HOH HOH . 
H 6 HOH A 60 460 28 HOH HOH . 
H 6 HOH A 61 461 80 HOH HOH . 
H 6 HOH A 62 462 22 HOH HOH . 
H 6 HOH A 63 463 55 HOH HOH . 
H 6 HOH A 64 464 107 HOH HOH . 
H 6 HOH A 65 465 40 HOH HOH . 
H 6 HOH A 66 466 36 HOH HOH . 
H 6 HOH A 67 467 75 HOH HOH . 
H 6 HOH A 68 468 92 HOH HOH . 
H 6 HOH A 69 469 86 HOH HOH . 
H 6 HOH A 70 470 26 HOH HOH . 
H 6 HOH A 71 471 98 HOH HOH . 
H 6 HOH A 72 472 52 HOH HOH . 
H 6 HOH A 73 473 51 HOH HOH . 
H 6 HOH A 74 474 56 HOH HOH . 
H 6 HOH A 75 475 93 HOH HOH . 
H 6 HOH A 76 476 20 HOH HOH . 
H 6 HOH A 77 477 41 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 LHS . . . G 5 -36.735 23.148 76.352 0.62 64.56 ? N1 LHS 306 A 1 
HETATM 2 N N3 LHS . . . G 5 -39.932 21.937 77.76 0.62 51.18 ? N3 LHS 306 A 1 
HETATM 3 C C4 LHS . . . G 5 -38.07 23.023 76.598 0.62 60.22 ? C4 LHS 306 A 1 
HETATM 4 C C5 LHS . . . G 5 -38.625 21.939 77.463 0.62 57.27 ? C5 LHS 306 A 1 
HETATM 5 C C6 LHS . . . G 5 -40.567 20.789 78.405 0.62 50.05 ? C6 LHS 306 A 1 
HETATM 6 C C7 LHS . . . G 5 -40.185 20.564 79.853 0.62 49.74 ? C7 LHS 306 A 1 
HETATM 7 C C8 LHS . . . G 5 -40.286 21.583 80.787 0.62 48.99 ? C8 LHS 306 A 1 
HETATM 8 C C10 LHS . . . G 5 -39.545 20.135 82.501 0.62 51.53 ? C10 LHS 306 A 1 
HETATM 9 C C1 LHS . . . G 5 -35.189 25.543 72.772 0.62 68.47 ? C1 LHS 306 A 1 
HETATM 10 C C11 LHS . . . G 5 -39.441 19.091 81.623 0.62 51.3 ? C11 LHS 306 A 1 
HETATM 11 C C12 LHS . . . G 5 -39.769 19.316 80.294 0.62 51.5 ? C12 LHS 306 A 1 
HETATM 12 C C2 LHS . . . G 5 -35.3 24.721 75.013 0.62 63.11 ? C2 LHS 306 A 1 
HETATM 13 C C3 LHS . . . G 5 -36.564 24.139 75.546 0.62 63.9 ? C3 LHS 306 A 1 
HETATM 14 C C9 LHS . . . G 5 -39.953 21.382 82.118 0.62 49.23 ? C9 LHS 306 A 1 
HETATM 15 F F1 LHS . . . G 5 -39.224 19.923 83.809 0.62 47.51 ? F1 LHS 306 A 1 
HETATM 16 N N2 LHS . . . G 5 -38.716 23.971 75.954 0.62 62.93 ? N2 LHS 306 A 1 
HETATM 17 O O1 LHS . . . G 5 -35.063 24.421 73.643 0.62 70.13 ? O1 LHS 306 A 1 
HETATM 18 O O2 LHS . . . G 5 -37.726 24.725 75.254 0.62 66.49 ? O2 LHS 306 A 1 
HETATM 19 O O3 LHS . . . G 5 -37.876 21.038 77.86 0.62 61.89 ? O3 LHS 306 A 1 
#
_model_server_stats.io_time_ms              21 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           224 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           19 
#