data_5QPB # _model_server_result.job_id -YGiqIc5BbgRHSjb37eY3w _model_server_result.datetime_utc '2024-11-24 19:10:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5qpb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":307}' # _entry.id 5QPB # _exptl.entry_id 5QPB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 193.203 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[3-(carbamoylamino)phenyl]acetamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5QPB _cell.length_a 48.033 _cell.length_b 60.377 _cell.length_c 65.097 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5QPB _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C9 H11 N3 O2' _chem_comp.formula_weight 193.203 _chem_comp.id LJA _chem_comp.mon_nstd_flag . _chem_comp.name N-[3-(carbamoylamino)phenyl]acetamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O2 C9 LJA doub 218 n n N2 C9 LJA sing 219 n n N2 C7 LJA sing 220 n n C9 N3 LJA sing 221 n n C7 C6 LJA doub 222 n y C7 C8 LJA sing 223 n y C6 C5 LJA sing 224 n y C8 C3 LJA doub 225 n y C5 C4 LJA doub 226 n y C3 C4 LJA sing 227 n y C3 N1 LJA sing 228 n n N1 C2 LJA sing 229 n n C2 O1 LJA doub 230 n n C2 C1 LJA sing 231 n n N1 H1 LJA sing 232 n n N3 H2 LJA sing 233 n n N3 H3 LJA sing 234 n n C4 H4 LJA sing 235 n n C5 H5 LJA sing 236 n n C6 H6 LJA sing 237 n n C8 H7 LJA sing 238 n n C1 H8 LJA sing 239 n n C1 H9 LJA sing 240 n n C1 H10 LJA sing 241 n n N2 H11 LJA sing 242 n n # _atom_sites.entry_id 5QPB _atom_sites.fract_transf_matrix[1][1] 0.020819 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016563 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015362 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 301 2 EDO EDO . C 2 EDO A 1 302 3 EDO EDO . D 3 DMS A 1 303 1 DMS DMS . E 4 ACT A 1 304 1 ACT ACT . F 4 ACT A 1 305 2 ACT ACT . G 5 PEG A 1 306 1 PEG PEG . H 6 LJA A 1 307 1 LJA LIG . I 7 HOH A 1 401 83 HOH HOH . I 7 HOH A 2 402 104 HOH HOH . I 7 HOH A 3 403 19 HOH HOH . I 7 HOH A 4 404 70 HOH HOH . I 7 HOH A 5 405 8 HOH HOH . I 7 HOH A 6 406 78 HOH HOH . I 7 HOH A 7 407 60 HOH HOH . I 7 HOH A 8 408 38 HOH HOH . I 7 HOH A 9 409 16 HOH HOH . I 7 HOH A 10 410 12 HOH HOH . I 7 HOH A 11 411 95 HOH HOH . I 7 HOH A 12 412 68 HOH HOH . I 7 HOH A 13 413 23 HOH HOH . I 7 HOH A 14 414 90 HOH HOH . I 7 HOH A 15 415 66 HOH HOH . I 7 HOH A 16 416 88 HOH HOH . I 7 HOH A 17 417 13 HOH HOH . I 7 HOH A 18 418 17 HOH HOH . I 7 HOH A 19 419 100 HOH HOH . I 7 HOH A 20 420 67 HOH HOH . I 7 HOH A 21 421 96 HOH HOH . I 7 HOH A 22 422 85 HOH HOH . I 7 HOH A 23 423 102 HOH HOH . I 7 HOH A 24 424 39 HOH HOH . I 7 HOH A 25 425 1 HOH HOH . I 7 HOH A 26 426 46 HOH HOH . I 7 HOH A 27 427 10 HOH HOH . I 7 HOH A 28 428 5 HOH HOH . I 7 HOH A 29 429 97 HOH HOH . I 7 HOH A 30 430 14 HOH HOH . I 7 HOH A 31 431 103 HOH HOH . I 7 HOH A 32 432 18 HOH HOH . I 7 HOH A 33 433 4 HOH HOH . I 7 HOH A 34 434 31 HOH HOH . I 7 HOH A 35 435 22 HOH HOH . I 7 HOH A 36 436 32 HOH HOH . I 7 HOH A 37 437 2 HOH HOH . I 7 HOH A 38 438 35 HOH HOH . I 7 HOH A 39 439 29 HOH HOH . I 7 HOH A 40 440 94 HOH HOH . I 7 HOH A 41 441 15 HOH HOH . I 7 HOH A 42 442 71 HOH HOH . I 7 HOH A 43 443 3 HOH HOH . I 7 HOH A 44 444 7 HOH HOH . I 7 HOH A 45 445 9 HOH HOH . I 7 HOH A 46 446 24 HOH HOH . I 7 HOH A 47 447 105 HOH HOH . I 7 HOH A 48 448 6 HOH HOH . I 7 HOH A 49 449 65 HOH HOH . I 7 HOH A 50 450 50 HOH HOH . I 7 HOH A 51 451 55 HOH HOH . I 7 HOH A 52 452 59 HOH HOH . I 7 HOH A 53 453 36 HOH HOH . I 7 HOH A 54 454 43 HOH HOH . I 7 HOH A 55 455 30 HOH HOH . I 7 HOH A 56 456 47 HOH HOH . I 7 HOH A 57 457 106 HOH HOH . I 7 HOH A 58 458 62 HOH HOH . I 7 HOH A 59 459 27 HOH HOH . I 7 HOH A 60 460 101 HOH HOH . I 7 HOH A 61 461 57 HOH HOH . I 7 HOH A 62 462 79 HOH HOH . I 7 HOH A 63 463 11 HOH HOH . I 7 HOH A 64 464 33 HOH HOH . I 7 HOH A 65 465 92 HOH HOH . I 7 HOH A 66 466 28 HOH HOH . I 7 HOH A 67 467 52 HOH HOH . I 7 HOH A 68 468 42 HOH HOH . I 7 HOH A 69 469 80 HOH HOH . I 7 HOH A 70 470 87 HOH HOH . I 7 HOH A 71 471 69 HOH HOH . I 7 HOH A 72 472 21 HOH HOH . I 7 HOH A 73 473 109 HOH HOH . I 7 HOH A 74 474 84 HOH HOH . I 7 HOH A 75 475 40 HOH HOH . I 7 HOH A 76 476 25 HOH HOH . I 7 HOH A 77 477 72 HOH HOH . I 7 HOH A 78 478 75 HOH HOH . I 7 HOH A 79 479 86 HOH HOH . I 7 HOH A 80 480 74 HOH HOH . I 7 HOH A 81 481 26 HOH HOH . I 7 HOH A 82 482 98 HOH HOH . I 7 HOH A 83 483 81 HOH HOH . I 7 HOH A 84 484 51 HOH HOH . I 7 HOH A 85 485 20 HOH HOH . I 7 HOH A 86 486 56 HOH HOH . I 7 HOH A 87 487 93 HOH HOH . I 7 HOH A 88 488 41 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 LJA . . . H 6 -32.676 15.93 74.64 0.61 64.66 ? N1 LJA 307 A 1 HETATM 2 N N3 LJA . . . H 6 -32.4 20.364 72.243 0.61 57.74 ? N3 LJA 307 A 1 HETATM 3 C C4 LJA . . . H 6 -34.917 16.058 73.748 0.61 63.54 ? C4 LJA 307 A 1 HETATM 4 C C5 LJA . . . H 6 -35.846 16.612 72.886 0.61 66.23 ? C5 LJA 307 A 1 HETATM 5 C C6 LJA . . . H 6 -35.483 17.603 71.994 0.61 65.73 ? C6 LJA 307 A 1 HETATM 6 C C7 LJA . . . H 6 -34.166 18.064 71.969 0.61 65.02 ? C7 LJA 307 A 1 HETATM 7 C C8 LJA . . . H 6 -33.221 17.513 72.84 0.61 62.97 ? C8 LJA 307 A 1 HETATM 8 C C1 LJA . . . H 6 -31.94 16.501 76.875 0.61 70.08 ? C1 LJA 307 A 1 HETATM 9 C C2 LJA . . . H 6 -32.833 15.708 75.971 0.61 65.84 ? C2 LJA 307 A 1 HETATM 10 C C3 LJA . . . H 6 -33.599 16.51 73.734 0.61 65.12 ? C3 LJA 307 A 1 HETATM 11 C C9 LJA . . . H 6 -32.863 19.98 71.032 0.61 60.74 ? C9 LJA 307 A 1 HETATM 12 N N2 LJA . . . H 6 -33.879 19.072 71.031 0.61 62.02 ? N2 LJA 307 A 1 HETATM 13 O O1 LJA . . . H 6 -33.641 14.919 76.43 0.61 63.61 ? O1 LJA 307 A 1 HETATM 14 O O2 LJA . . . H 6 -32.391 20.45 69.987 0.61 58.21 ? O2 LJA 307 A 1 # _model_server_stats.io_time_ms 41 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 226 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 14 #