data_5QRF # _model_server_result.job_id '_L0MTJkL5d8GHRVultMOFw' _model_server_result.datetime_utc '2024-11-22 00:27:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5qrf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":306}' # _entry.id 5QRF # _exptl.entry_id 5QRF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 193.246 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(1-ethyl-1H-pyrazol-4-yl)cyclobutanecarboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5QRF _cell.length_a 60.06 _cell.length_b 60.06 _cell.length_c 110.25 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5QRF _symmetry.cell_setting ? _symmetry.Int_Tables_number 91 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 61 A HIS 100 1_555 E CD CD . A CD 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? metalc ? metalc2 A SG CYS 83 A CYS 122 1_555 D CD CD . A CD 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.572 ? metalc ? metalc3 A SG CYS 83 A CYS 122 1_555 F CD CD . A CD 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.446 ? metalc ? metalc4 A OE1 GLU 128 A GLU 167 1_555 B CD CD . A CD 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.607 ? metalc ? metalc5 A OE1 GLU 128 A GLU 167 1_555 B CD CD . A CD 301 5_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.607 ? metalc ? metalc6 A OE1 GLU 128 A GLU 167 1_555 C CD CD . A CD 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.64 ? metalc ? metalc7 A OE2 GLU 128 A GLU 167 1_555 C CD CD . A CD 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.499 ? metalc ? metalc8 A SG CYS 147 A CYS 186 1_555 B CD CD . A CD 301 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.426 ? metalc ? metalc9 A SG CYS 147 A CYS 186 1_555 B CD CD . A CD 301 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.469 ? metalc ? metalc10 A SG CYS 147 A CYS 186 1_555 B CD CD . A CD 301 5_655 ? A ? ? ? ? ? ? ? ? ? ? 2.426 ? metalc ? metalc11 A SG CYS 147 A CYS 186 1_555 B CD CD . A CD 301 5_655 ? B ? ? ? ? ? ? ? ? ? ? 2.469 ? metalc ? metalc12 A SG CYS 147 A CYS 186 1_555 C CD CD . A CD 302 5_655 ? A ? ? ? ? ? ? ? ? ? ? 2.585 ? metalc ? metalc13 A SG CYS 147 A CYS 186 1_555 C CD CD . A CD 302 5_655 ? B ? ? ? ? ? ? ? ? ? ? 2.598 ? metalc ? metalc14 B CD CD . A CD 301 1_555 H O HOH . A HOH 457 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.977 ? metalc ? metalc15 B CD CD . A CD 301 1_555 H O HOH . A HOH 457 5_655 ? ? ? ? ? ? ? ? ? ? ? ? 1.977 ? metalc ? metalc16 C CD CD . A CD 302 1_555 H O HOH . A HOH 455 5_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc17 C CD CD . A CD 302 1_555 H O HOH . A HOH 463 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc18 D CD CD . A CD 303 1_555 H O HOH . A HOH 454 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? metalc ? metalc19 E CD CD . A CD 304 1_555 H O HOH . A HOH 461 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc20 E CD CD . A CD 304 1_555 H O HOH . A HOH 462 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? metalc ? metalc21 E CD CD . A CD 304 1_555 H O HOH . A HOH 464 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.532 ? # _chem_comp.formula 'C10 H15 N3 O' _chem_comp.formula_weight 193.246 _chem_comp.id NUA _chem_comp.mon_nstd_flag . _chem_comp.name N-(1-ethyl-1H-pyrazol-4-yl)cyclobutanecarboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C9 C6 NUA sing 237 n n C9 C8 NUA sing 238 n n C6 C5 NUA sing 239 n n C6 C7 NUA sing 240 n n C8 C7 NUA sing 241 n n N2 C5 NUA sing 242 n n N2 C4 NUA sing 243 n n C10 C4 NUA sing 244 n y C10 N3 NUA doub 245 n y C5 O1 NUA doub 246 n n C4 C3 NUA doub 247 n y N3 N1 NUA sing 248 n y C3 N1 NUA sing 249 n y N1 C2 NUA sing 250 n n C2 C1 NUA sing 251 n n C6 H1 NUA sing 252 n n C7 H2 NUA sing 253 n n C7 H3 NUA sing 254 n n C8 H4 NUA sing 255 n n C8 H5 NUA sing 256 n n C10 H6 NUA sing 257 n n C1 H7 NUA sing 258 n n C1 H8 NUA sing 259 n n C1 H9 NUA sing 260 n n C2 H10 NUA sing 261 n n C2 H11 NUA sing 262 n n C3 H12 NUA sing 263 n n C9 H13 NUA sing 264 n n C9 H14 NUA sing 265 n n N2 H15 NUA sing 266 n n # _atom_sites.entry_id 5QRF _atom_sites.fract_transf_matrix[1][1] 0.01665 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01665 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00907 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CD A 1 301 1 CD CD . C 2 CD A 1 302 2 CD CD . D 2 CD A 1 303 3 CD CD . E 2 CD A 1 304 4 CD CD . F 2 CD A 1 305 5 CD CD . G 3 NUA A 1 306 1 NUA LIG . H 4 HOH A 1 401 68 HOH HOH . H 4 HOH A 2 402 55 HOH HOH . H 4 HOH A 3 403 79 HOH HOH . H 4 HOH A 4 404 53 HOH HOH . H 4 HOH A 5 405 48 HOH HOH . H 4 HOH A 6 406 44 HOH HOH . H 4 HOH A 7 407 54 HOH HOH . H 4 HOH A 8 408 24 HOH HOH . H 4 HOH A 9 409 42 HOH HOH . H 4 HOH A 10 410 58 HOH HOH . H 4 HOH A 11 411 45 HOH HOH . H 4 HOH A 12 412 16 HOH HOH . H 4 HOH A 13 413 41 HOH HOH . H 4 HOH A 14 414 21 HOH HOH . H 4 HOH A 15 415 50 HOH HOH . H 4 HOH A 16 416 60 HOH HOH . H 4 HOH A 17 417 71 HOH HOH . H 4 HOH A 18 418 52 HOH HOH . H 4 HOH A 19 419 61 HOH HOH . H 4 HOH A 20 420 14 HOH HOH . H 4 HOH A 21 421 31 HOH HOH . H 4 HOH A 22 422 70 HOH HOH . H 4 HOH A 23 423 17 HOH HOH . H 4 HOH A 24 424 75 HOH HOH . H 4 HOH A 25 425 10 HOH HOH . H 4 HOH A 26 426 67 HOH HOH . H 4 HOH A 27 427 49 HOH HOH . H 4 HOH A 28 428 52 HOH HOH . H 4 HOH A 29 429 4 HOH HOH . H 4 HOH A 30 430 56 HOH HOH . H 4 HOH A 31 431 8 HOH HOH . H 4 HOH A 32 432 33 HOH HOH . H 4 HOH A 33 433 69 HOH HOH . H 4 HOH A 34 434 51 HOH HOH . H 4 HOH A 35 435 45 HOH HOH . H 4 HOH A 36 436 1 HOH HOH . H 4 HOH A 37 437 6 HOH HOH . H 4 HOH A 38 438 63 HOH HOH . H 4 HOH A 39 439 47 HOH HOH . H 4 HOH A 40 440 8 HOH HOH . H 4 HOH A 41 441 73 HOH HOH . H 4 HOH A 42 442 23 HOH HOH . H 4 HOH A 43 443 18 HOH HOH . H 4 HOH A 44 444 32 HOH HOH . H 4 HOH A 45 445 30 HOH HOH . H 4 HOH A 46 446 64 HOH HOH . H 4 HOH A 47 447 28 HOH HOH . H 4 HOH A 48 448 12 HOH HOH . H 4 HOH A 49 449 2 HOH HOH . H 4 HOH A 50 450 57 HOH HOH . H 4 HOH A 51 451 14 HOH HOH . H 4 HOH A 52 452 46 HOH HOH . H 4 HOH A 53 453 66 HOH HOH . H 4 HOH A 54 454 77 HOH HOH . H 4 HOH A 55 455 4 HOH HOH . H 4 HOH A 56 456 65 HOH HOH . H 4 HOH A 57 457 1 HOH HOH . H 4 HOH A 58 458 11 HOH HOH . H 4 HOH A 59 459 15 HOH HOH . H 4 HOH A 60 460 76 HOH HOH . H 4 HOH A 61 461 6 HOH HOH . H 4 HOH A 62 462 5 HOH HOH . H 4 HOH A 63 463 3 HOH HOH . H 4 HOH A 64 464 7 HOH HOH . H 4 HOH A 65 465 3 HOH HOH . H 4 HOH A 66 466 72 HOH HOH . H 4 HOH A 67 467 13 HOH HOH . H 4 HOH A 68 468 10 HOH HOH . H 4 HOH A 69 469 62 HOH HOH . H 4 HOH A 70 470 59 HOH HOH . H 4 HOH A 71 471 43 HOH HOH . H 4 HOH A 72 472 78 HOH HOH . H 4 HOH A 73 473 16 HOH HOH . H 4 HOH A 74 474 17 HOH HOH . H 4 HOH A 75 475 18 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 NUA . . . G 3 25.319 5.571 22.777 0.74 48.42 ? N1 NUA 306 A 1 HETATM 2 N N3 NUA . . . G 3 25.257 6.922 22.642 0.74 50.93 ? N3 NUA 306 A 1 HETATM 3 C C4 NUA . . . G 3 27.309 6.168 21.994 0.74 46.9 ? C4 NUA 306 A 1 HETATM 4 C C5 NUA . . . G 3 29.392 5.192 21.065 0.74 46.58 ? C5 NUA 306 A 1 HETATM 5 C C6 NUA . . . G 3 30.7 5.648 20.402 0.74 43.17 ? C6 NUA 306 A 1 HETATM 6 C C7 NUA . . . G 3 31.815 4.576 20.3 0.74 43.94 ? C7 NUA 306 A 1 HETATM 7 C C8 NUA . . . G 3 32.166 5.196 18.955 0.74 41.08 ? C8 NUA 306 A 1 HETATM 8 C C10 NUA . . . G 3 26.472 7.31 22.17 0.74 48.4 ? C10 NUA 306 A 1 HETATM 9 C C1 NUA . . . G 3 23.418 4.151 22.093 0.74 46.71 ? C1 NUA 306 A 1 HETATM 10 C C2 NUA . . . G 3 24.162 4.793 23.257 0.74 46.59 ? C2 NUA 306 A 1 HETATM 11 C C3 NUA . . . G 3 26.567 5.053 22.406 0.74 46.8 ? C3 NUA 306 A 1 HETATM 12 C C9 NUA . . . G 3 30.682 5.59 18.856 0.74 41.64 ? C9 NUA 306 A 1 HETATM 13 N N2 NUA . . . G 3 28.561 6.269 21.398 0.74 46.08 ? N2 NUA 306 A 1 HETATM 14 O O1 NUA . . . G 3 29.095 3.996 21.331 0.74 39.87 ? O1 NUA 306 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 14 #