data_5QRV # _model_server_result.job_id i6V_yVX0f6FN70AnVcw7CA _model_server_result.datetime_utc '2024-12-26 22:44:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5qrv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":306}' # _entry.id 5QRV # _exptl.entry_id 5QRV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 223.229 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-(furan-2-carbonyl)piperazine-1-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5QRV _cell.length_a 60.02 _cell.length_b 60.02 _cell.length_c 110.05 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5QRV _symmetry.cell_setting ? _symmetry.Int_Tables_number 91 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 61 A HIS 100 1_555 E CD CD . A CD 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc2 A SG CYS 83 A CYS 122 1_555 D CD CD . A CD 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.615 ? metalc ? metalc3 A SG CYS 83 A CYS 122 1_555 F CD CD . A CD 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.492 ? metalc ? metalc4 A OE1 GLU 128 A GLU 167 1_555 B CD CD . A CD 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.513 ? metalc ? metalc5 A OE1 GLU 128 A GLU 167 1_555 B CD CD . A CD 301 5_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.513 ? metalc ? metalc6 A OE1 GLU 128 A GLU 167 1_555 C CD CD . A CD 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.684 ? metalc ? metalc7 A OE2 GLU 128 A GLU 167 1_555 C CD CD . A CD 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc8 A SG CYS 147 A CYS 186 1_555 B CD CD . A CD 301 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.393 ? metalc ? metalc9 A SG CYS 147 A CYS 186 1_555 B CD CD . A CD 301 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.466 ? metalc ? metalc10 A SG CYS 147 A CYS 186 1_555 B CD CD . A CD 301 5_655 ? A ? ? ? ? ? ? ? ? ? ? 2.393 ? metalc ? metalc11 A SG CYS 147 A CYS 186 1_555 B CD CD . A CD 301 5_655 ? B ? ? ? ? ? ? ? ? ? ? 2.466 ? metalc ? metalc12 A SG CYS 147 A CYS 186 1_555 C CD CD . A CD 302 5_655 ? A ? ? ? ? ? ? ? ? ? ? 2.57 ? metalc ? metalc13 A SG CYS 147 A CYS 186 1_555 C CD CD . A CD 302 5_655 ? B ? ? ? ? ? ? ? ? ? ? 2.474 ? metalc ? metalc14 B CD CD . A CD 301 1_555 H O HOH . A HOH 457 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc15 B CD CD . A CD 301 1_555 H O HOH . A HOH 457 5_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc16 C CD CD . A CD 302 1_555 H O HOH . A HOH 454 5_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc17 C CD CD . A CD 302 1_555 H O HOH . A HOH 462 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc18 D CD CD . A CD 303 1_555 H O HOH . A HOH 455 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.441 ? metalc ? metalc19 E CD CD . A CD 304 1_555 H O HOH . A HOH 459 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? metalc ? metalc20 E CD CD . A CD 304 1_555 H O HOH . A HOH 460 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.38 ? metalc ? metalc21 E CD CD . A CD 304 1_555 H O HOH . A HOH 463 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? metalc ? metalc22 F CD CD . A CD 305 1_555 H O HOH . A HOH 446 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.577 ? metalc ? metalc23 F CD CD . A CD 305 1_555 H O HOH . A HOH 470 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.59 ? # _chem_comp.formula 'C10 H13 N3 O3' _chem_comp.formula_weight 223.229 _chem_comp.id K2M _chem_comp.mon_nstd_flag . _chem_comp.name 4-(furan-2-carbonyl)piperazine-1-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N C K2M sing 173 n n C4 C3 K2M sing 174 n n C4 N1 K2M sing 175 n n C N1 K2M sing 176 n n C O K2M doub 177 n n C3 N2 K2M sing 178 n n N1 C1 K2M sing 179 n n C7 C8 K2M sing 180 n y C7 C6 K2M doub 181 n y C1 C2 K2M sing 182 n n C8 C9 K2M doub 183 n y N2 C2 K2M sing 184 n n N2 C5 K2M sing 185 n n C6 C5 K2M sing 186 n n C6 O2 K2M sing 187 n y C9 O2 K2M sing 188 n y C5 O1 K2M doub 189 n n C4 H1 K2M sing 190 n n C4 H2 K2M sing 191 n n C7 H3 K2M sing 192 n n C8 H4 K2M sing 193 n n N H5 K2M sing 194 n n N H6 K2M sing 195 n n C1 H7 K2M sing 196 n n C1 H8 K2M sing 197 n n C2 H9 K2M sing 198 n n C2 H10 K2M sing 199 n n C3 H11 K2M sing 200 n n C3 H12 K2M sing 201 n n C9 H13 K2M sing 202 n n # _atom_sites.entry_id 5QRV _atom_sites.fract_transf_matrix[1][1] 0.016661 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016661 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009087 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CD A 1 301 1 CD CD . C 2 CD A 1 302 2 CD CD . D 2 CD A 1 303 3 CD CD . E 2 CD A 1 304 4 CD CD . F 2 CD A 1 305 5 CD CD . G 3 K2M A 1 306 1 K2M LIG . H 4 HOH A 1 401 53 HOH HOH . H 4 HOH A 2 402 79 HOH HOH . H 4 HOH A 3 403 48 HOH HOH . H 4 HOH A 4 404 24 HOH HOH . H 4 HOH A 5 405 21 HOH HOH . H 4 HOH A 6 406 45 HOH HOH . H 4 HOH A 7 407 58 HOH HOH . H 4 HOH A 8 408 68 HOH HOH . H 4 HOH A 9 409 61 HOH HOH . H 4 HOH A 10 410 54 HOH HOH . H 4 HOH A 11 411 55 HOH HOH . H 4 HOH A 12 412 71 HOH HOH . H 4 HOH A 13 413 14 HOH HOH . H 4 HOH A 14 414 16 HOH HOH . H 4 HOH A 15 415 44 HOH HOH . H 4 HOH A 16 416 41 HOH HOH . H 4 HOH A 17 417 51 HOH HOH . H 4 HOH A 18 418 4 HOH HOH . H 4 HOH A 19 419 70 HOH HOH . H 4 HOH A 20 420 50 HOH HOH . H 4 HOH A 21 421 52 HOH HOH . H 4 HOH A 22 422 49 HOH HOH . H 4 HOH A 23 423 56 HOH HOH . H 4 HOH A 24 424 52 HOH HOH . H 4 HOH A 25 425 67 HOH HOH . H 4 HOH A 26 426 31 HOH HOH . H 4 HOH A 27 427 32 HOH HOH . H 4 HOH A 28 428 33 HOH HOH . H 4 HOH A 29 429 17 HOH HOH . H 4 HOH A 30 430 47 HOH HOH . H 4 HOH A 31 431 63 HOH HOH . H 4 HOH A 32 432 45 HOH HOH . H 4 HOH A 33 433 10 HOH HOH . H 4 HOH A 34 434 69 HOH HOH . H 4 HOH A 35 435 18 HOH HOH . H 4 HOH A 36 436 6 HOH HOH . H 4 HOH A 37 437 75 HOH HOH . H 4 HOH A 38 438 8 HOH HOH . H 4 HOH A 39 439 1 HOH HOH . H 4 HOH A 40 440 57 HOH HOH . H 4 HOH A 41 441 66 HOH HOH . H 4 HOH A 42 442 73 HOH HOH . H 4 HOH A 43 443 8 HOH HOH . H 4 HOH A 44 444 30 HOH HOH . H 4 HOH A 45 445 64 HOH HOH . H 4 HOH A 46 446 12 HOH HOH . H 4 HOH A 47 447 60 HOH HOH . H 4 HOH A 48 448 14 HOH HOH . H 4 HOH A 49 449 28 HOH HOH . H 4 HOH A 50 450 11 HOH HOH . H 4 HOH A 51 451 23 HOH HOH . H 4 HOH A 52 452 2 HOH HOH . H 4 HOH A 53 453 46 HOH HOH . H 4 HOH A 54 454 4 HOH HOH . H 4 HOH A 55 455 77 HOH HOH . H 4 HOH A 56 456 65 HOH HOH . H 4 HOH A 57 457 1 HOH HOH . H 4 HOH A 58 458 15 HOH HOH . H 4 HOH A 59 459 6 HOH HOH . H 4 HOH A 60 460 7 HOH HOH . H 4 HOH A 61 461 72 HOH HOH . H 4 HOH A 62 462 3 HOH HOH . H 4 HOH A 63 463 5 HOH HOH . H 4 HOH A 64 464 10 HOH HOH . H 4 HOH A 65 465 62 HOH HOH . H 4 HOH A 66 466 43 HOH HOH . H 4 HOH A 67 467 78 HOH HOH . H 4 HOH A 68 468 16 HOH HOH . H 4 HOH A 69 469 17 HOH HOH . H 4 HOH A 70 470 18 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 K2M . . . G 3 26.093 7.591 22.796 0.44 36.55 ? N1 K2M 306 A 1 HETATM 2 C C4 K2M . . . G 3 27.536 7.798 22.728 0.44 37.24 ? C4 K2M 306 A 1 HETATM 3 C C5 K2M . . . G 3 28.609 4.567 21.328 0.44 31.43 ? C5 K2M 306 A 1 HETATM 4 C C6 K2M . . . G 3 29.628 4.72 20.332 0.44 34.03 ? C6 K2M 306 A 1 HETATM 5 C C7 K2M . . . G 3 30.768 4.036 20.102 0.44 33.74 ? C7 K2M 306 A 1 HETATM 6 C C8 K2M . . . G 3 31.371 4.606 18.958 0.44 34.18 ? C8 K2M 306 A 1 HETATM 7 N N K2M . . . G 3 24.248 8.134 24.04 0.44 32.97 ? N K2M 306 A 1 HETATM 8 C C K2M . . . G 3 25.33 8.556 23.398 0.44 34.92 ? C K2M 306 A 1 HETATM 9 O O K2M . . . G 3 25.633 9.75 23.347 0.44 34.93 ? O K2M 306 A 1 HETATM 10 C C1 K2M . . . G 3 25.793 6.183 23.032 0.44 37.22 ? C1 K2M 306 A 1 HETATM 11 C C2 K2M . . . G 3 26.356 5.31 21.935 0.44 36.39 ? C2 K2M 306 A 1 HETATM 12 C C3 K2M . . . G 3 28.162 6.983 21.617 0.44 34.3 ? C3 K2M 306 A 1 HETATM 13 C C9 K2M . . . G 3 30.543 5.634 18.56 0.44 35.67 ? C9 K2M 306 A 1 HETATM 14 N N2 K2M . . . G 3 27.78 5.568 21.677 0.44 33.4 ? N2 K2M 306 A 1 HETATM 15 O O1 K2M . . . G 3 28.446 3.44 21.765 0.44 30.39 ? O1 K2M 306 A 1 HETATM 16 O O2 K2M . . . G 3 29.466 5.704 19.395 0.44 35.11 ? O2 K2M 306 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 16 #