data_5QSB # _model_server_result.job_id xS3qem-eXcZOWmnJpj43vA _model_server_result.datetime_utc '2024-11-06 22:45:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5qsb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 5QSB # _exptl.entry_id 5QSB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 233.349 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-{[4-(propan-2-yl)phenyl]methyl}piperidin-4-ol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5QSB _cell.length_a 99.07 _cell.length_b 99.07 _cell.length_c 99.57 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5QSB _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C15 H23 N O' _chem_comp.formula_weight 233.349 _chem_comp.id O0M _chem_comp.mon_nstd_flag . _chem_comp.name 1-{[4-(propan-2-yl)phenyl]methyl}piperidin-4-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C11 C12 O0M sing 237 n n C11 C10 O0M sing 238 n n C12 N O0M sing 239 n n O C10 O0M sing 240 n n C10 C9 O0M sing 241 n n C9 C8 O0M sing 242 n n N C8 O0M sing 243 n n N C7 O0M sing 244 n n C7 C6 O0M sing 245 n n C6 C13 O0M doub 246 n y C6 C5 O0M sing 247 n y C13 C14 O0M sing 248 n y C5 C4 O0M doub 249 n y C14 C3 O0M doub 250 n y C4 C3 O0M sing 251 n y C3 C1 O0M sing 252 n n C1 C O0M sing 253 n n C1 C2 O0M sing 254 n n C4 H1 O0M sing 255 n n C5 H2 O0M sing 256 n n C7 H3 O0M sing 257 n n C7 H4 O0M sing 258 n n C8 H5 O0M sing 259 n n C8 H6 O0M sing 260 n n C10 H7 O0M sing 261 n n C13 H8 O0M sing 262 n n C H10 O0M sing 263 n n C H11 O0M sing 264 n n C H12 O0M sing 265 n n O H13 O0M sing 266 n n C1 H14 O0M sing 267 n n C11 H15 O0M sing 268 n n C11 H16 O0M sing 269 n n C12 H17 O0M sing 270 n n C12 H18 O0M sing 271 n n C14 H19 O0M sing 272 n n C2 H20 O0M sing 273 n n C2 H21 O0M sing 274 n n C2 H22 O0M sing 275 n n C9 H23 O0M sing 276 n n C9 H24 O0M sing 277 n n # _atom_sites.entry_id 5QSB _atom_sites.fract_transf_matrix[1][1] 0.010094 _atom_sites.fract_transf_matrix[1][2] 0.005828 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011655 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010043 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 O0M A 1 301 301 O0M LIG . C 3 HOH A 1 401 233 HOH HOH . C 3 HOH A 2 402 162 HOH HOH . C 3 HOH A 3 403 77 HOH HOH . C 3 HOH A 4 404 106 HOH HOH . C 3 HOH A 5 405 141 HOH HOH . C 3 HOH A 6 406 4 HOH HOH . C 3 HOH A 7 407 198 HOH HOH . C 3 HOH A 8 408 48 HOH HOH . C 3 HOH A 9 409 231 HOH HOH . C 3 HOH A 10 410 149 HOH HOH . C 3 HOH A 11 411 26 HOH HOH . C 3 HOH A 12 412 152 HOH HOH . C 3 HOH A 13 413 125 HOH HOH . C 3 HOH A 14 414 107 HOH HOH . C 3 HOH A 15 415 113 HOH HOH . C 3 HOH A 16 416 167 HOH HOH . C 3 HOH A 17 417 78 HOH HOH . C 3 HOH A 18 418 32 HOH HOH . C 3 HOH A 19 419 72 HOH HOH . C 3 HOH A 20 420 14 HOH HOH . C 3 HOH A 21 421 12 HOH HOH . C 3 HOH A 22 422 67 HOH HOH . C 3 HOH A 23 423 57 HOH HOH . C 3 HOH A 24 424 207 HOH HOH . C 3 HOH A 25 425 182 HOH HOH . C 3 HOH A 26 426 174 HOH HOH . C 3 HOH A 27 427 22 HOH HOH . C 3 HOH A 28 428 133 HOH HOH . C 3 HOH A 29 429 111 HOH HOH . C 3 HOH A 30 430 76 HOH HOH . C 3 HOH A 31 431 23 HOH HOH . C 3 HOH A 32 432 95 HOH HOH . C 3 HOH A 33 433 158 HOH HOH . C 3 HOH A 34 434 96 HOH HOH . C 3 HOH A 35 435 103 HOH HOH . C 3 HOH A 36 436 165 HOH HOH . C 3 HOH A 37 437 59 HOH HOH . C 3 HOH A 38 438 97 HOH HOH . C 3 HOH A 39 439 191 HOH HOH . C 3 HOH A 40 440 157 HOH HOH . C 3 HOH A 41 441 202 HOH HOH . C 3 HOH A 42 442 150 HOH HOH . C 3 HOH A 43 443 116 HOH HOH . C 3 HOH A 44 444 31 HOH HOH . C 3 HOH A 45 445 64 HOH HOH . C 3 HOH A 46 446 187 HOH HOH . C 3 HOH A 47 447 27 HOH HOH . C 3 HOH A 48 448 45 HOH HOH . C 3 HOH A 49 449 42 HOH HOH . C 3 HOH A 50 450 51 HOH HOH . C 3 HOH A 51 451 36 HOH HOH . C 3 HOH A 52 452 62 HOH HOH . C 3 HOH A 53 453 15 HOH HOH . C 3 HOH A 54 454 3 HOH HOH . C 3 HOH A 55 455 44 HOH HOH . C 3 HOH A 56 456 104 HOH HOH . C 3 HOH A 57 457 118 HOH HOH . C 3 HOH A 58 458 8 HOH HOH . C 3 HOH A 59 459 208 HOH HOH . C 3 HOH A 60 460 17 HOH HOH . C 3 HOH A 61 461 35 HOH HOH . C 3 HOH A 62 462 68 HOH HOH . C 3 HOH A 63 463 89 HOH HOH . C 3 HOH A 64 464 171 HOH HOH . C 3 HOH A 65 465 124 HOH HOH . C 3 HOH A 66 466 190 HOH HOH . C 3 HOH A 67 467 30 HOH HOH . C 3 HOH A 68 468 168 HOH HOH . C 3 HOH A 69 469 185 HOH HOH . C 3 HOH A 70 470 195 HOH HOH . C 3 HOH A 71 471 183 HOH HOH . C 3 HOH A 72 472 5 HOH HOH . C 3 HOH A 73 473 9 HOH HOH . C 3 HOH A 74 474 87 HOH HOH . C 3 HOH A 75 475 232 HOH HOH . C 3 HOH A 76 476 1 HOH HOH . C 3 HOH A 77 477 47 HOH HOH . C 3 HOH A 78 478 40 HOH HOH . C 3 HOH A 79 479 176 HOH HOH . C 3 HOH A 80 480 109 HOH HOH . C 3 HOH A 81 481 37 HOH HOH . C 3 HOH A 82 482 6 HOH HOH . C 3 HOH A 83 483 170 HOH HOH . C 3 HOH A 84 484 13 HOH HOH . C 3 HOH A 85 485 179 HOH HOH . C 3 HOH A 86 486 61 HOH HOH . C 3 HOH A 87 487 50 HOH HOH . C 3 HOH A 88 488 38 HOH HOH . C 3 HOH A 89 489 93 HOH HOH . C 3 HOH A 90 490 70 HOH HOH . C 3 HOH A 91 491 39 HOH HOH . C 3 HOH A 92 492 33 HOH HOH . C 3 HOH A 93 493 154 HOH HOH . C 3 HOH A 94 494 166 HOH HOH . C 3 HOH A 95 495 60 HOH HOH . C 3 HOH A 96 496 58 HOH HOH . C 3 HOH A 97 497 66 HOH HOH . C 3 HOH A 98 498 56 HOH HOH . C 3 HOH A 99 499 199 HOH HOH . C 3 HOH A 100 500 184 HOH HOH . C 3 HOH A 101 501 28 HOH HOH . C 3 HOH A 102 502 151 HOH HOH . C 3 HOH A 103 503 180 HOH HOH . C 3 HOH A 104 504 164 HOH HOH . C 3 HOH A 105 505 209 HOH HOH . C 3 HOH A 106 506 140 HOH HOH . C 3 HOH A 107 507 7 HOH HOH . C 3 HOH A 108 508 94 HOH HOH . C 3 HOH A 109 509 188 HOH HOH . C 3 HOH A 110 510 175 HOH HOH . C 3 HOH A 111 511 178 HOH HOH . C 3 HOH A 112 512 99 HOH HOH . C 3 HOH A 113 513 138 HOH HOH . C 3 HOH A 114 514 25 HOH HOH . C 3 HOH A 115 515 11 HOH HOH . C 3 HOH A 116 516 161 HOH HOH . C 3 HOH A 117 517 213 HOH HOH . C 3 HOH A 118 518 24 HOH HOH . C 3 HOH A 119 519 82 HOH HOH . C 3 HOH A 120 520 163 HOH HOH . C 3 HOH A 121 521 169 HOH HOH . C 3 HOH A 122 522 20 HOH HOH . C 3 HOH A 123 523 16 HOH HOH . C 3 HOH A 124 524 160 HOH HOH . C 3 HOH A 125 525 117 HOH HOH . C 3 HOH A 126 526 98 HOH HOH . C 3 HOH A 127 527 2 HOH HOH . C 3 HOH A 128 528 92 HOH HOH . C 3 HOH A 129 529 29 HOH HOH . C 3 HOH A 130 530 135 HOH HOH . C 3 HOH A 131 531 85 HOH HOH . C 3 HOH A 132 532 210 HOH HOH . C 3 HOH A 133 533 172 HOH HOH . C 3 HOH A 134 534 114 HOH HOH . C 3 HOH A 135 535 181 HOH HOH . C 3 HOH A 136 536 127 HOH HOH . C 3 HOH A 137 537 80 HOH HOH . C 3 HOH A 138 538 100 HOH HOH . C 3 HOH A 139 539 131 HOH HOH . C 3 HOH A 140 540 173 HOH HOH . C 3 HOH A 141 541 186 HOH HOH . C 3 HOH A 142 542 234 HOH HOH . C 3 HOH A 143 543 83 HOH HOH . C 3 HOH A 144 544 193 HOH HOH . C 3 HOH A 145 545 136 HOH HOH . C 3 HOH A 146 546 139 HOH HOH . C 3 HOH A 147 547 197 HOH HOH . C 3 HOH A 148 548 156 HOH HOH . C 3 HOH A 149 549 19 HOH HOH . C 3 HOH A 150 550 204 HOH HOH . C 3 HOH A 151 551 200 HOH HOH . C 3 HOH A 152 552 137 HOH HOH . C 3 HOH A 153 553 206 HOH HOH . C 3 HOH A 154 554 108 HOH HOH . C 3 HOH A 155 555 229 HOH HOH . C 3 HOH A 156 556 143 HOH HOH . C 3 HOH A 157 557 55 HOH HOH . C 3 HOH A 158 558 21 HOH HOH . C 3 HOH A 159 559 217 HOH HOH . C 3 HOH A 160 560 74 HOH HOH . C 3 HOH A 161 561 132 HOH HOH . C 3 HOH A 162 562 144 HOH HOH . C 3 HOH A 163 563 155 HOH HOH . C 3 HOH A 164 564 222 HOH HOH . C 3 HOH A 165 565 130 HOH HOH . C 3 HOH A 166 566 71 HOH HOH . C 3 HOH A 167 567 153 HOH HOH . C 3 HOH A 168 568 73 HOH HOH . C 3 HOH A 169 569 142 HOH HOH . C 3 HOH A 170 570 112 HOH HOH . C 3 HOH A 171 571 128 HOH HOH . C 3 HOH A 172 572 110 HOH HOH . C 3 HOH A 173 573 134 HOH HOH . C 3 HOH A 174 574 211 HOH HOH . C 3 HOH A 175 575 203 HOH HOH . C 3 HOH A 176 576 147 HOH HOH . C 3 HOH A 177 577 145 HOH HOH . C 3 HOH A 178 578 146 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 O0M . . . B 2 -17.788 -30.386 0.646 0.45 58.1 ? C4 O0M 301 A 1 HETATM 2 C C5 O0M . . . B 2 -17.489 -30.604 -0.699 0.45 63.48 ? C5 O0M 301 A 1 HETATM 3 C C6 O0M . . . B 2 -16.754 -29.677 -1.411 0.45 60.55 ? C6 O0M 301 A 1 HETATM 4 C C7 O0M . . . B 2 -16.545 -29.811 -2.885 0.45 59.46 ? C7 O0M 301 A 1 HETATM 5 C C8 O0M . . . B 2 -14.993 -31.64 -2.989 0.45 59.69 ? C8 O0M 301 A 1 HETATM 6 C C10 O0M . . . B 2 -12.689 -31.03 -3.986 0.45 56.24 ? C10 O0M 301 A 1 HETATM 7 C C13 O0M . . . B 2 -16.289 -28.564 -0.762 0.45 60.34 ? C13 O0M 301 A 1 HETATM 8 N N O0M . . . B 2 -15.144 -30.189 -3.21 0.45 59.7 ? N O0M 301 A 1 HETATM 9 C C O0M . . . B 2 -19.257 -29.008 2.853 0.45 58.01 ? C O0M 301 A 1 HETATM 10 O O O0M . . . B 2 -11.479 -31.531 -4.427 0.45 51.53 ? O O0M 301 A 1 HETATM 11 C C1 O0M . . . B 2 -17.751 -28.915 2.678 0.45 58.36 ? C1 O0M 301 A 1 HETATM 12 C C11 O0M . . . B 2 -13.368 -30.136 -5.013 0.45 56.73 ? C11 O0M 301 A 1 HETATM 13 C C12 O0M . . . B 2 -14.825 -29.826 -4.632 0.45 57.37 ? C12 O0M 301 A 1 HETATM 14 C C14 O0M . . . B 2 -16.581 -28.352 0.569 0.45 65.71 ? C14 O0M 301 A 1 HETATM 15 C C2 O0M . . . B 2 -17.05 -29.772 3.691 0.45 56.27 ? C2 O0M 301 A 1 HETATM 16 C C3 O0M . . . B 2 -17.348 -29.242 1.282 0.45 59.34 ? C3 O0M 301 A 1 HETATM 17 C C9 O0M . . . B 2 -13.659 -32.137 -3.564 0.45 58.89 ? C9 O0M 301 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 17 #