data_5QSH # _model_server_result.job_id J_KJlpY2bY7Eu2mWkpqz1Q _model_server_result.datetime_utc '2024-11-22 22:05:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5qsh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 5QSH # _exptl.entry_id 5QSH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 222.302 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-ethyl-N-(2-fluorophenyl)piperidin-4-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5QSH _cell.length_a 99.38 _cell.length_b 99.38 _cell.length_c 99.29 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5QSH _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C13 H19 F N2' _chem_comp.formula_weight 222.302 _chem_comp.id NVY _chem_comp.mon_nstd_flag . _chem_comp.name 1-ethyl-N-(2-fluorophenyl)piperidin-4-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F1 C13 NVY sing 237 n n C12 C13 NVY doub 238 n y C12 C11 NVY sing 239 n y C13 C8 NVY sing 240 n y C11 C10 NVY doub 241 n y C8 N2 NVY sing 242 n n C8 C9 NVY doub 243 n y C10 C9 NVY sing 244 n y N2 C5 NVY sing 245 n n C5 C4 NVY sing 246 n n C5 C6 NVY sing 247 n n C4 C3 NVY sing 248 n n C6 C7 NVY sing 249 n n C3 N1 NVY sing 250 n n N1 C7 NVY sing 251 n n N1 C2 NVY sing 252 n n C2 C1 NVY sing 253 n n C4 H2 NVY sing 254 n n C4 H3 NVY sing 255 n n C5 H4 NVY sing 256 n n C6 H5 NVY sing 257 n n C6 H6 NVY sing 258 n n C7 H7 NVY sing 259 n n C7 H8 NVY sing 260 n n C10 H9 NVY sing 261 n n C1 H10 NVY sing 262 n n C1 H11 NVY sing 263 n n C1 H12 NVY sing 264 n n C11 H13 NVY sing 265 n n C12 H14 NVY sing 266 n n C2 H15 NVY sing 267 n n C2 H16 NVY sing 268 n n C3 H17 NVY sing 269 n n C3 H18 NVY sing 270 n n C9 H19 NVY sing 271 n n N2 H20 NVY sing 272 n n # _atom_sites.entry_id 5QSH _atom_sites.fract_transf_matrix[1][1] 0.010062 _atom_sites.fract_transf_matrix[1][2] 0.00581 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011619 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010072 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NVY A 1 301 301 NVY LIG . C 3 HOH A 1 401 77 HOH HOH . C 3 HOH A 2 402 106 HOH HOH . C 3 HOH A 3 403 16 HOH HOH . C 3 HOH A 4 404 103 HOH HOH . C 3 HOH A 5 405 150 HOH HOH . C 3 HOH A 6 406 78 HOH HOH . C 3 HOH A 7 407 50 HOH HOH . C 3 HOH A 8 408 198 HOH HOH . C 3 HOH A 9 409 231 HOH HOH . C 3 HOH A 10 410 111 HOH HOH . C 3 HOH A 11 411 17 HOH HOH . C 3 HOH A 12 412 194 HOH HOH . C 3 HOH A 13 413 8 HOH HOH . C 3 HOH A 14 414 166 HOH HOH . C 3 HOH A 15 415 48 HOH HOH . C 3 HOH A 16 416 26 HOH HOH . C 3 HOH A 17 417 12 HOH HOH . C 3 HOH A 18 418 105 HOH HOH . C 3 HOH A 19 419 27 HOH HOH . C 3 HOH A 20 420 123 HOH HOH . C 3 HOH A 21 421 157 HOH HOH . C 3 HOH A 22 422 96 HOH HOH . C 3 HOH A 23 423 113 HOH HOH . C 3 HOH A 24 424 68 HOH HOH . C 3 HOH A 25 425 170 HOH HOH . C 3 HOH A 26 426 149 HOH HOH . C 3 HOH A 27 427 164 HOH HOH . C 3 HOH A 28 428 32 HOH HOH . C 3 HOH A 29 429 182 HOH HOH . C 3 HOH A 30 430 23 HOH HOH . C 3 HOH A 31 431 104 HOH HOH . C 3 HOH A 32 432 46 HOH HOH . C 3 HOH A 33 433 108 HOH HOH . C 3 HOH A 34 434 14 HOH HOH . C 3 HOH A 35 435 45 HOH HOH . C 3 HOH A 36 436 125 HOH HOH . C 3 HOH A 37 437 72 HOH HOH . C 3 HOH A 38 438 152 HOH HOH . C 3 HOH A 39 439 88 HOH HOH . C 3 HOH A 40 440 22 HOH HOH . C 3 HOH A 41 441 4 HOH HOH . C 3 HOH A 42 442 174 HOH HOH . C 3 HOH A 43 443 95 HOH HOH . C 3 HOH A 44 444 25 HOH HOH . C 3 HOH A 45 445 207 HOH HOH . C 3 HOH A 46 446 89 HOH HOH . C 3 HOH A 47 447 196 HOH HOH . C 3 HOH A 48 448 228 HOH HOH . C 3 HOH A 49 449 41 HOH HOH . C 3 HOH A 50 450 76 HOH HOH . C 3 HOH A 51 451 86 HOH HOH . C 3 HOH A 52 452 101 HOH HOH . C 3 HOH A 53 453 202 HOH HOH . C 3 HOH A 54 454 44 HOH HOH . C 3 HOH A 55 455 133 HOH HOH . C 3 HOH A 56 456 171 HOH HOH . C 3 HOH A 57 457 107 HOH HOH . C 3 HOH A 58 458 109 HOH HOH . C 3 HOH A 59 459 40 HOH HOH . C 3 HOH A 60 460 118 HOH HOH . C 3 HOH A 61 461 57 HOH HOH . C 3 HOH A 62 462 183 HOH HOH . C 3 HOH A 63 463 81 HOH HOH . C 3 HOH A 64 464 5 HOH HOH . C 3 HOH A 65 465 167 HOH HOH . C 3 HOH A 66 466 67 HOH HOH . C 3 HOH A 67 467 154 HOH HOH . C 3 HOH A 68 468 9 HOH HOH . C 3 HOH A 69 469 51 HOH HOH . C 3 HOH A 70 470 90 HOH HOH . C 3 HOH A 71 471 62 HOH HOH . C 3 HOH A 72 472 165 HOH HOH . C 3 HOH A 73 473 42 HOH HOH . C 3 HOH A 74 474 64 HOH HOH . C 3 HOH A 75 475 87 HOH HOH . C 3 HOH A 76 476 209 HOH HOH . C 3 HOH A 77 477 59 HOH HOH . C 3 HOH A 78 478 36 HOH HOH . C 3 HOH A 79 479 38 HOH HOH . C 3 HOH A 80 480 158 HOH HOH . C 3 HOH A 81 481 1 HOH HOH . C 3 HOH A 82 482 176 HOH HOH . C 3 HOH A 83 483 187 HOH HOH . C 3 HOH A 84 484 61 HOH HOH . C 3 HOH A 85 485 213 HOH HOH . C 3 HOH A 86 486 70 HOH HOH . C 3 HOH A 87 487 30 HOH HOH . C 3 HOH A 88 488 47 HOH HOH . C 3 HOH A 89 489 3 HOH HOH . C 3 HOH A 90 490 6 HOH HOH . C 3 HOH A 91 491 159 HOH HOH . C 3 HOH A 92 492 31 HOH HOH . C 3 HOH A 93 493 69 HOH HOH . C 3 HOH A 94 494 35 HOH HOH . C 3 HOH A 95 495 138 HOH HOH . C 3 HOH A 96 496 39 HOH HOH . C 3 HOH A 97 497 195 HOH HOH . C 3 HOH A 98 498 114 HOH HOH . C 3 HOH A 99 499 54 HOH HOH . C 3 HOH A 100 500 94 HOH HOH . C 3 HOH A 101 501 232 HOH HOH . C 3 HOH A 102 502 185 HOH HOH . C 3 HOH A 103 503 162 HOH HOH . C 3 HOH A 104 504 13 HOH HOH . C 3 HOH A 105 505 175 HOH HOH . C 3 HOH A 106 506 181 HOH HOH . C 3 HOH A 107 507 191 HOH HOH . C 3 HOH A 108 508 124 HOH HOH . C 3 HOH A 109 509 37 HOH HOH . C 3 HOH A 110 510 223 HOH HOH . C 3 HOH A 111 511 169 HOH HOH . C 3 HOH A 112 512 15 HOH HOH . C 3 HOH A 113 513 93 HOH HOH . C 3 HOH A 114 514 28 HOH HOH . C 3 HOH A 115 515 204 HOH HOH . C 3 HOH A 116 516 160 HOH HOH . C 3 HOH A 117 517 179 HOH HOH . C 3 HOH A 118 518 33 HOH HOH . C 3 HOH A 119 519 20 HOH HOH . C 3 HOH A 120 520 60 HOH HOH . C 3 HOH A 121 521 56 HOH HOH . C 3 HOH A 122 522 233 HOH HOH . C 3 HOH A 123 523 52 HOH HOH . C 3 HOH A 124 524 168 HOH HOH . C 3 HOH A 125 525 85 HOH HOH . C 3 HOH A 126 526 163 HOH HOH . C 3 HOH A 127 527 117 HOH HOH . C 3 HOH A 128 528 122 HOH HOH . C 3 HOH A 129 529 99 HOH HOH . C 3 HOH A 130 530 66 HOH HOH . C 3 HOH A 131 531 7 HOH HOH . C 3 HOH A 132 532 11 HOH HOH . C 3 HOH A 133 533 180 HOH HOH . C 3 HOH A 134 534 24 HOH HOH . C 3 HOH A 135 535 184 HOH HOH . C 3 HOH A 136 536 151 HOH HOH . C 3 HOH A 137 537 199 HOH HOH . C 3 HOH A 138 538 161 HOH HOH . C 3 HOH A 139 539 58 HOH HOH . C 3 HOH A 140 540 100 HOH HOH . C 3 HOH A 141 541 208 HOH HOH . C 3 HOH A 142 542 43 HOH HOH . C 3 HOH A 143 543 127 HOH HOH . C 3 HOH A 144 544 29 HOH HOH . C 3 HOH A 145 545 2 HOH HOH . C 3 HOH A 146 546 214 HOH HOH . C 3 HOH A 147 547 83 HOH HOH . C 3 HOH A 148 548 188 HOH HOH . C 3 HOH A 149 549 190 HOH HOH . C 3 HOH A 150 550 135 HOH HOH . C 3 HOH A 151 551 82 HOH HOH . C 3 HOH A 152 552 205 HOH HOH . C 3 HOH A 153 553 172 HOH HOH . C 3 HOH A 154 554 178 HOH HOH . C 3 HOH A 155 555 92 HOH HOH . C 3 HOH A 156 556 121 HOH HOH . C 3 HOH A 157 557 218 HOH HOH . C 3 HOH A 158 558 173 HOH HOH . C 3 HOH A 159 559 189 HOH HOH . C 3 HOH A 160 560 139 HOH HOH . C 3 HOH A 161 561 197 HOH HOH . C 3 HOH A 162 562 98 HOH HOH . C 3 HOH A 163 563 19 HOH HOH . C 3 HOH A 164 564 156 HOH HOH . C 3 HOH A 165 565 200 HOH HOH . C 3 HOH A 166 566 80 HOH HOH . C 3 HOH A 167 567 129 HOH HOH . C 3 HOH A 168 568 206 HOH HOH . C 3 HOH A 169 569 193 HOH HOH . C 3 HOH A 170 570 215 HOH HOH . C 3 HOH A 171 571 186 HOH HOH . C 3 HOH A 172 572 65 HOH HOH . C 3 HOH A 173 573 222 HOH HOH . C 3 HOH A 174 574 116 HOH HOH . C 3 HOH A 175 575 21 HOH HOH . C 3 HOH A 176 576 137 HOH HOH . C 3 HOH A 177 577 234 HOH HOH . C 3 HOH A 178 578 55 HOH HOH . C 3 HOH A 179 579 74 HOH HOH . C 3 HOH A 180 580 210 HOH HOH . C 3 HOH A 181 581 217 HOH HOH . C 3 HOH A 182 582 155 HOH HOH . C 3 HOH A 183 583 142 HOH HOH . C 3 HOH A 184 584 102 HOH HOH . C 3 HOH A 185 585 132 HOH HOH . C 3 HOH A 186 586 110 HOH HOH . C 3 HOH A 187 587 79 HOH HOH . C 3 HOH A 188 588 144 HOH HOH . C 3 HOH A 189 589 126 HOH HOH . C 3 HOH A 190 590 130 HOH HOH . C 3 HOH A 191 591 75 HOH HOH . C 3 HOH A 192 592 91 HOH HOH . C 3 HOH A 193 593 112 HOH HOH . C 3 HOH A 194 594 230 HOH HOH . C 3 HOH A 195 595 115 HOH HOH . C 3 HOH A 196 596 71 HOH HOH . C 3 HOH A 197 597 49 HOH HOH . C 3 HOH A 198 598 136 HOH HOH . C 3 HOH A 199 599 73 HOH HOH . C 3 HOH A 200 600 153 HOH HOH . C 3 HOH A 201 601 128 HOH HOH . C 3 HOH A 202 602 63 HOH HOH . C 3 HOH A 203 603 134 HOH HOH . C 3 HOH A 204 604 148 HOH HOH . C 3 HOH A 205 605 211 HOH HOH . C 3 HOH A 206 606 147 HOH HOH . C 3 HOH A 207 607 145 HOH HOH . C 3 HOH A 208 608 203 HOH HOH . C 3 HOH A 209 609 146 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 NVY . . . B 2 -18.398 -29.845 5.623 0.4 52.94 ? N1 NVY 301 A 1 HETATM 2 C C4 NVY . . . B 2 -18.906 -29.156 3.424 0.4 49.97 ? C4 NVY 301 A 1 HETATM 3 C C5 NVY . . . B 2 -17.455 -29.476 3.052 0.4 49.76 ? C5 NVY 301 A 1 HETATM 4 C C6 NVY . . . B 2 -16.487 -29.225 4.271 0.4 49.09 ? C6 NVY 301 A 1 HETATM 5 C C7 NVY . . . B 2 -16.974 -29.668 5.641 0.4 50.11 ? C7 NVY 301 A 1 HETATM 6 C C8 NVY . . . B 2 -17.004 -29.211 0.75 0.4 48.61 ? C8 NVY 301 A 1 HETATM 7 C C10 NVY . . . B 2 -17.41 -30.781 -0.948 0.4 48.24 ? C10 NVY 301 A 1 HETATM 8 C C13 NVY . . . B 2 -16.374 -28.482 -0.236 0.4 31.81 ? C13 NVY 301 A 1 HETATM 9 C C1 NVY . . . B 2 -20.378 -30.223 6.912 0.4 54.12 ? C1 NVY 301 A 1 HETATM 10 C C11 NVY . . . B 2 -16.779 -30.022 -1.901 0.4 44.71 ? C11 NVY 301 A 1 HETATM 11 C C12 NVY . . . B 2 -16.293 -28.914 -1.538 0.4 39.01 ? C12 NVY 301 A 1 HETATM 12 C C2 NVY . . . B 2 -18.928 -29.789 6.964 0.4 53.66 ? C2 NVY 301 A 1 HETATM 13 C C3 NVY . . . B 2 -19.013 -28.785 4.875 0.4 51.07 ? C3 NVY 301 A 1 HETATM 14 C C9 NVY . . . B 2 -17.534 -30.388 0.363 0.4 53.51 ? C9 NVY 301 A 1 HETATM 15 F F1 NVY . . . B 2 -15.835 -27.418 0.047 0.4 75.99 ? F1 NVY 301 A 1 HETATM 16 N N2 NVY . . . B 2 -17.106 -28.739 1.944 0.4 49.4 ? N2 NVY 301 A 1 # _model_server_stats.io_time_ms 42 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 16 #