data_5QSJ # _model_server_result.job_id JWMNbmunSbyG-H_xeA1kGA _model_server_result.datetime_utc '2024-11-13 11:13:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5qsj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 5QSJ # _exptl.entry_id 5QSJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 223.247 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-(4-fluorophenyl)piperazine-1-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5QSJ _cell.length_a 100.116 _cell.length_b 100.116 _cell.length_c 98.988 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5QSJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C11 H14 F N3 O' _chem_comp.formula_weight 223.247 _chem_comp.id O1M _chem_comp.mon_nstd_flag . _chem_comp.name 4-(4-fluorophenyl)piperazine-1-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F C8 O1M sing 237 n n C8 C9 O1M doub 238 n y C8 C7 O1M sing 239 n y C9 C10 O1M sing 240 n y C7 C6 O1M doub 241 n y C10 C5 O1M doub 242 n y C6 C5 O1M sing 243 n y C5 N2 O1M sing 244 n n N2 C3 O1M sing 245 n n N2 C2 O1M sing 246 n n C3 C4 O1M sing 247 n n C2 C1 O1M sing 248 n n C4 N1 O1M sing 249 n n C1 N1 O1M sing 250 n n N1 C O1M sing 251 n n C N O1M sing 252 n n C O O1M doub 253 n n C4 H1 O1M sing 254 n n C4 H2 O1M sing 255 n n C6 H3 O1M sing 256 n n C7 H4 O1M sing 257 n n C10 H5 O1M sing 258 n n N H6 O1M sing 259 n n N H7 O1M sing 260 n n C1 H8 O1M sing 261 n n C1 H9 O1M sing 262 n n C2 H10 O1M sing 263 n n C2 H11 O1M sing 264 n n C3 H12 O1M sing 265 n n C3 H13 O1M sing 266 n n C9 H14 O1M sing 267 n n # _atom_sites.entry_id 5QSJ _atom_sites.fract_transf_matrix[1][1] 0.009988 _atom_sites.fract_transf_matrix[1][2] 0.005767 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011534 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010102 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 O1M A 1 301 301 O1M LIG . C 3 HOH A 1 401 113 HOH HOH . C 3 HOH A 2 402 106 HOH HOH . C 3 HOH A 3 403 166 HOH HOH . C 3 HOH A 4 404 101 HOH HOH . C 3 HOH A 5 405 46 HOH HOH . C 3 HOH A 6 406 77 HOH HOH . C 3 HOH A 7 407 111 HOH HOH . C 3 HOH A 8 408 125 HOH HOH . C 3 HOH A 9 409 157 HOH HOH . C 3 HOH A 10 410 17 HOH HOH . C 3 HOH A 11 411 156 HOH HOH . C 3 HOH A 12 412 141 HOH HOH . C 3 HOH A 13 413 162 HOH HOH . C 3 HOH A 14 414 182 HOH HOH . C 3 HOH A 15 415 48 HOH HOH . C 3 HOH A 16 416 26 HOH HOH . C 3 HOH A 17 417 31 HOH HOH . C 3 HOH A 18 418 103 HOH HOH . C 3 HOH A 19 419 122 HOH HOH . C 3 HOH A 20 420 32 HOH HOH . C 3 HOH A 21 421 27 HOH HOH . C 3 HOH A 22 422 78 HOH HOH . C 3 HOH A 23 423 235 HOH HOH . C 3 HOH A 24 424 170 HOH HOH . C 3 HOH A 25 425 133 HOH HOH . C 3 HOH A 26 426 104 HOH HOH . C 3 HOH A 27 427 62 HOH HOH . C 3 HOH A 28 428 154 HOH HOH . C 3 HOH A 29 429 40 HOH HOH . C 3 HOH A 30 430 220 HOH HOH . C 3 HOH A 31 431 118 HOH HOH . C 3 HOH A 32 432 210 HOH HOH . C 3 HOH A 33 433 83 HOH HOH . C 3 HOH A 34 434 23 HOH HOH . C 3 HOH A 35 435 88 HOH HOH . C 3 HOH A 36 436 44 HOH HOH . C 3 HOH A 37 437 61 HOH HOH . C 3 HOH A 38 438 150 HOH HOH . C 3 HOH A 39 439 174 HOH HOH . C 3 HOH A 40 440 159 HOH HOH . C 3 HOH A 41 441 15 HOH HOH . C 3 HOH A 42 442 167 HOH HOH . C 3 HOH A 43 443 149 HOH HOH . C 3 HOH A 44 444 59 HOH HOH . C 3 HOH A 45 445 208 HOH HOH . C 3 HOH A 46 446 158 HOH HOH . C 3 HOH A 47 447 188 HOH HOH . C 3 HOH A 48 448 47 HOH HOH . C 3 HOH A 49 449 5 HOH HOH . C 3 HOH A 50 450 207 HOH HOH . C 3 HOH A 51 451 152 HOH HOH . C 3 HOH A 52 452 45 HOH HOH . C 3 HOH A 53 453 14 HOH HOH . C 3 HOH A 54 454 22 HOH HOH . C 3 HOH A 55 455 92 HOH HOH . C 3 HOH A 56 456 76 HOH HOH . C 3 HOH A 57 457 35 HOH HOH . C 3 HOH A 58 458 68 HOH HOH . C 3 HOH A 59 459 218 HOH HOH . C 3 HOH A 60 460 42 HOH HOH . C 3 HOH A 61 461 89 HOH HOH . C 3 HOH A 62 462 180 HOH HOH . C 3 HOH A 63 463 165 HOH HOH . C 3 HOH A 64 464 81 HOH HOH . C 3 HOH A 65 465 66 HOH HOH . C 3 HOH A 66 466 4 HOH HOH . C 3 HOH A 67 467 67 HOH HOH . C 3 HOH A 68 468 36 HOH HOH . C 3 HOH A 69 469 16 HOH HOH . C 3 HOH A 70 470 206 HOH HOH . C 3 HOH A 71 471 12 HOH HOH . C 3 HOH A 72 472 11 HOH HOH . C 3 HOH A 73 473 57 HOH HOH . C 3 HOH A 74 474 72 HOH HOH . C 3 HOH A 75 475 195 HOH HOH . C 3 HOH A 76 476 1 HOH HOH . C 3 HOH A 77 477 124 HOH HOH . C 3 HOH A 78 478 9 HOH HOH . C 3 HOH A 79 479 60 HOH HOH . C 3 HOH A 80 480 194 HOH HOH . C 3 HOH A 81 481 228 HOH HOH . C 3 HOH A 82 482 51 HOH HOH . C 3 HOH A 83 483 64 HOH HOH . C 3 HOH A 84 484 96 HOH HOH . C 3 HOH A 85 485 237 HOH HOH . C 3 HOH A 86 486 171 HOH HOH . C 3 HOH A 87 487 6 HOH HOH . C 3 HOH A 88 488 107 HOH HOH . C 3 HOH A 89 489 13 HOH HOH . C 3 HOH A 90 490 30 HOH HOH . C 3 HOH A 91 491 50 HOH HOH . C 3 HOH A 92 492 164 HOH HOH . C 3 HOH A 93 493 151 HOH HOH . C 3 HOH A 94 494 38 HOH HOH . C 3 HOH A 95 495 176 HOH HOH . C 3 HOH A 96 496 33 HOH HOH . C 3 HOH A 97 497 204 HOH HOH . C 3 HOH A 98 498 70 HOH HOH . C 3 HOH A 99 499 163 HOH HOH . C 3 HOH A 100 500 181 HOH HOH . C 3 HOH A 101 501 199 HOH HOH . C 3 HOH A 102 502 178 HOH HOH . C 3 HOH A 103 503 3 HOH HOH . C 3 HOH A 104 504 56 HOH HOH . C 3 HOH A 105 505 209 HOH HOH . C 3 HOH A 106 506 90 HOH HOH . C 3 HOH A 107 507 43 HOH HOH . C 3 HOH A 108 508 58 HOH HOH . C 3 HOH A 109 509 161 HOH HOH . C 3 HOH A 110 510 24 HOH HOH . C 3 HOH A 111 511 54 HOH HOH . C 3 HOH A 112 512 52 HOH HOH . C 3 HOH A 113 513 39 HOH HOH . C 3 HOH A 114 514 191 HOH HOH . C 3 HOH A 115 515 7 HOH HOH . C 3 HOH A 116 516 222 HOH HOH . C 3 HOH A 117 517 231 HOH HOH . C 3 HOH A 118 518 142 HOH HOH . C 3 HOH A 119 519 86 HOH HOH . C 3 HOH A 120 520 37 HOH HOH . C 3 HOH A 121 521 216 HOH HOH . C 3 HOH A 122 522 41 HOH HOH . C 3 HOH A 123 523 87 HOH HOH . C 3 HOH A 124 524 25 HOH HOH . C 3 HOH A 125 525 20 HOH HOH . C 3 HOH A 126 526 175 HOH HOH . C 3 HOH A 127 527 138 HOH HOH . C 3 HOH A 128 528 168 HOH HOH . C 3 HOH A 129 529 109 HOH HOH . C 3 HOH A 130 530 28 HOH HOH . C 3 HOH A 131 531 82 HOH HOH . C 3 HOH A 132 532 85 HOH HOH . C 3 HOH A 133 533 2 HOH HOH . C 3 HOH A 134 534 184 HOH HOH . C 3 HOH A 135 535 179 HOH HOH . C 3 HOH A 136 536 100 HOH HOH . C 3 HOH A 137 537 172 HOH HOH . C 3 HOH A 138 538 99 HOH HOH . C 3 HOH A 139 539 213 HOH HOH . C 3 HOH A 140 540 186 HOH HOH . C 3 HOH A 141 541 121 HOH HOH . C 3 HOH A 142 542 135 HOH HOH . C 3 HOH A 143 543 29 HOH HOH . C 3 HOH A 144 544 160 HOH HOH . C 3 HOH A 145 545 173 HOH HOH . C 3 HOH A 146 546 84 HOH HOH . C 3 HOH A 147 547 217 HOH HOH . C 3 HOH A 148 548 224 HOH HOH . C 3 HOH A 149 549 187 HOH HOH . C 3 HOH A 150 550 200 HOH HOH . C 3 HOH A 151 551 131 HOH HOH . C 3 HOH A 152 552 97 HOH HOH . C 3 HOH A 153 553 238 HOH HOH . C 3 HOH A 154 554 80 HOH HOH . C 3 HOH A 155 555 19 HOH HOH . C 3 HOH A 156 556 136 HOH HOH . C 3 HOH A 157 557 94 HOH HOH . C 3 HOH A 158 558 234 HOH HOH . C 3 HOH A 159 559 98 HOH HOH . C 3 HOH A 160 560 116 HOH HOH . C 3 HOH A 161 561 214 HOH HOH . C 3 HOH A 162 562 117 HOH HOH . C 3 HOH A 163 563 236 HOH HOH . C 3 HOH A 164 564 155 HOH HOH . C 3 HOH A 165 565 129 HOH HOH . C 3 HOH A 166 566 144 HOH HOH . C 3 HOH A 167 567 65 HOH HOH . C 3 HOH A 168 568 55 HOH HOH . C 3 HOH A 169 569 137 HOH HOH . C 3 HOH A 170 570 21 HOH HOH . C 3 HOH A 171 571 110 HOH HOH . C 3 HOH A 172 572 73 HOH HOH . C 3 HOH A 173 573 71 HOH HOH . C 3 HOH A 174 574 49 HOH HOH . C 3 HOH A 175 575 153 HOH HOH . C 3 HOH A 176 576 102 HOH HOH . C 3 HOH A 177 577 211 HOH HOH . C 3 HOH A 178 578 75 HOH HOH . C 3 HOH A 179 579 145 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 O1M . . . B 2 -18.054 -29.787 4.483 0.4 55.28 ? N1 O1M 301 A 1 HETATM 2 C C4 O1M . . . B 2 -18.385 -30.8 3.457 0.4 55.92 ? C4 O1M 301 A 1 HETATM 3 C C5 O1M . . . B 2 -16.904 -29.314 0.422 0.4 59.62 ? C5 O1M 301 A 1 HETATM 4 C C6 O1M . . . B 2 -16.382 -28.246 -0.096 0.4 78.64 ? C6 O1M 301 A 1 HETATM 5 C C7 O1M . . . B 2 -16.189 -28.179 -1.449 0.4 123.54 ? C7 O1M 301 A 1 HETATM 6 C C8 O1M . . . B 2 -16.556 -29.234 -2.19 0.4 125.63 ? C8 O1M 301 A 1 HETATM 7 C C10 O1M . . . B 2 -17.256 -30.33 -0.376 0.4 105.89 ? C10 O1M 301 A 1 HETATM 8 N N O1M . . . B 2 -20.286 -30.066 5.229 0.4 54.54 ? N O1M 301 A 1 HETATM 9 C C O1M . . . B 2 -19.136 -29.297 5.226 0.4 54.92 ? C O1M 301 A 1 HETATM 10 O O O1M . . . B 2 -19.094 -28.25 5.839 0.4 50.96 ? O O1M 301 A 1 HETATM 11 C C1 O1M . . . B 2 -16.995 -28.829 4.087 0.4 56.34 ? C1 O1M 301 A 1 HETATM 12 C C2 O1M . . . B 2 -16.981 -28.423 2.602 0.4 55.69 ? C2 O1M 301 A 1 HETATM 13 C C3 O1M . . . B 2 -18.289 -30.235 2.039 0.4 56.75 ? C3 O1M 301 A 1 HETATM 14 C C9 O1M . . . B 2 -17.074 -30.27 -1.679 0.4 125.37 ? C9 O1M 301 A 1 HETATM 15 F F O1M . . . B 2 -16.399 -29.265 -3.41 0.4 130.59 ? F O1M 301 A 1 HETATM 16 N N2 O1M . . . B 2 -17.106 -29.513 1.771 0.4 55.45 ? N2 O1M 301 A 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 16 #