data_5QSV # _model_server_result.job_id 7CXMIFnzRyoLIuEHlsmUDA _model_server_result.datetime_utc '2024-12-23 06:34:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5qsv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":501}' # _entry.id 5QSV # _exptl.entry_id 5QSV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 215.266 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-benzyl-1-(4-fluorophenyl)methanamine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 95.13 _cell.angle_beta 99.21 _cell.angle_gamma 115.27 _cell.entry_id 5QSV _cell.length_a 66.443 _cell.length_b 71.748 _cell.length_c 118.782 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5QSV _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,F 1 1 B,G 2 1 C,H 3 1 D,E,I 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H14 F N' _chem_comp.formula_weight 215.266 _chem_comp.id O3G _chem_comp.mon_nstd_flag . _chem_comp.name N-benzyl-1-(4-fluorophenyl)methanamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C11 C10 O3G doub 237 n y C11 C12 O3G sing 238 n y C10 C9 O3G sing 239 n y C12 C7 O3G doub 240 n y C9 C8 O3G doub 241 n y C7 C8 O3G sing 242 n y C7 C6 O3G sing 243 n n C6 N1 O3G sing 244 n n N1 C5 O3G sing 245 n n C5 C4 O3G sing 246 n n C4 C13 O3G doub 247 n y C4 C3 O3G sing 248 n y C13 C14 O3G sing 249 n y C3 C2 O3G doub 250 n y C14 C1 O3G doub 251 n y C2 C1 O3G sing 252 n y C1 F1 O3G sing 253 n n N1 H1 O3G sing 254 n n C5 H3 O3G sing 255 n n C5 H4 O3G sing 256 n n C6 H5 O3G sing 257 n n C6 H6 O3G sing 258 n n C8 H7 O3G sing 259 n n C10 H8 O3G sing 260 n n C13 H9 O3G sing 261 n n C11 H10 O3G sing 262 n n C12 H11 O3G sing 263 n n C14 H12 O3G sing 264 n n C2 H13 O3G sing 265 n n C3 H14 O3G sing 266 n n C9 H15 O3G sing 267 n n # _atom_sites.entry_id 5QSV _atom_sites.fract_transf_matrix[1][1] 0.01505 _atom_sites.fract_transf_matrix[1][2] 0.007104 _atom_sites.fract_transf_matrix[1][3] 0.003756 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015412 _atom_sites.fract_transf_matrix[2][3] 0.002766 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008665 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 O3G D 1 501 501 O3G LIG . F 3 HOH C 1 501 82 HOH HOH . F 3 HOH C 2 502 104 HOH HOH . F 3 HOH C 3 503 175 HOH HOH . F 3 HOH C 4 504 18 HOH HOH . F 3 HOH C 5 505 42 HOH HOH . F 3 HOH C 6 506 101 HOH HOH . F 3 HOH C 7 507 91 HOH HOH . F 3 HOH C 8 508 97 HOH HOH . F 3 HOH C 9 509 176 HOH HOH . F 3 HOH C 10 510 68 HOH HOH . F 3 HOH C 11 511 35 HOH HOH . F 3 HOH C 12 512 33 HOH HOH . F 3 HOH C 13 513 54 HOH HOH . F 3 HOH C 14 514 173 HOH HOH . F 3 HOH C 15 515 200 HOH HOH . F 3 HOH C 16 516 5 HOH HOH . F 3 HOH C 17 517 177 HOH HOH . F 3 HOH C 18 518 61 HOH HOH . F 3 HOH C 19 519 129 HOH HOH . F 3 HOH C 20 520 73 HOH HOH . F 3 HOH C 21 521 11 HOH HOH . F 3 HOH C 22 522 45 HOH HOH . F 3 HOH C 23 523 102 HOH HOH . F 3 HOH C 24 524 134 HOH HOH . F 3 HOH C 25 525 59 HOH HOH . F 3 HOH C 26 526 84 HOH HOH . F 3 HOH C 27 527 77 HOH HOH . F 3 HOH C 28 528 90 HOH HOH . F 3 HOH C 29 529 93 HOH HOH . F 3 HOH C 30 530 36 HOH HOH . F 3 HOH C 31 531 308 HOH HOH . F 3 HOH C 32 532 146 HOH HOH . F 3 HOH C 33 533 121 HOH HOH . F 3 HOH C 34 534 28 HOH HOH . F 3 HOH C 35 535 93 HOH HOH . F 3 HOH C 36 536 131 HOH HOH . F 3 HOH C 37 537 150 HOH HOH . F 3 HOH C 38 538 14 HOH HOH . F 3 HOH C 39 539 12 HOH HOH . F 3 HOH C 40 540 23 HOH HOH . F 3 HOH C 41 541 18 HOH HOH . F 3 HOH C 42 542 155 HOH HOH . G 3 HOH A 1 501 103 HOH HOH . G 3 HOH A 2 502 32 HOH HOH . G 3 HOH A 3 503 76 HOH HOH . G 3 HOH A 4 504 99 HOH HOH . G 3 HOH A 5 505 88 HOH HOH . G 3 HOH A 6 506 174 HOH HOH . G 3 HOH A 7 507 95 HOH HOH . G 3 HOH A 8 508 7 HOH HOH . G 3 HOH A 9 509 66 HOH HOH . G 3 HOH A 10 510 69 HOH HOH . G 3 HOH A 11 511 25 HOH HOH . G 3 HOH A 12 512 100 HOH HOH . G 3 HOH A 13 513 106 HOH HOH . G 3 HOH A 14 514 21 HOH HOH . G 3 HOH A 15 515 2 HOH HOH . G 3 HOH A 16 516 70 HOH HOH . G 3 HOH A 17 517 88 HOH HOH . G 3 HOH A 18 518 78 HOH HOH . G 3 HOH A 19 519 114 HOH HOH . G 3 HOH A 20 520 16 HOH HOH . G 3 HOH A 21 521 168 HOH HOH . G 3 HOH A 22 522 153 HOH HOH . G 3 HOH A 23 523 79 HOH HOH . G 3 HOH A 24 524 89 HOH HOH . G 3 HOH A 25 525 111 HOH HOH . G 3 HOH A 26 526 148 HOH HOH . G 3 HOH A 27 527 98 HOH HOH . G 3 HOH A 28 528 58 HOH HOH . G 3 HOH A 29 529 19 HOH HOH . G 3 HOH A 30 530 67 HOH HOH . G 3 HOH A 31 531 230 HOH HOH . G 3 HOH A 32 532 184 HOH HOH . G 3 HOH A 33 533 171 HOH HOH . G 3 HOH A 34 534 143 HOH HOH . G 3 HOH A 35 535 112 HOH HOH . G 3 HOH A 36 536 107 HOH HOH . G 3 HOH A 37 537 80 HOH HOH . H 3 HOH B 1 501 269 HOH HOH . H 3 HOH B 2 502 14 HOH HOH . H 3 HOH B 3 503 43 HOH HOH . H 3 HOH B 4 504 257 HOH HOH . H 3 HOH B 5 505 30 HOH HOH . H 3 HOH B 6 506 20 HOH HOH . H 3 HOH B 7 507 22 HOH HOH . H 3 HOH B 8 508 47 HOH HOH . H 3 HOH B 9 509 57 HOH HOH . H 3 HOH B 10 510 169 HOH HOH . H 3 HOH B 11 511 163 HOH HOH . H 3 HOH B 12 512 152 HOH HOH . H 3 HOH B 13 513 24 HOH HOH . H 3 HOH B 14 514 146 HOH HOH . H 3 HOH B 15 515 98 HOH HOH . H 3 HOH B 16 516 13 HOH HOH . H 3 HOH B 17 517 63 HOH HOH . H 3 HOH B 18 518 113 HOH HOH . H 3 HOH B 19 519 124 HOH HOH . H 3 HOH B 20 520 166 HOH HOH . H 3 HOH B 21 521 176 HOH HOH . H 3 HOH B 22 522 156 HOH HOH . H 3 HOH B 23 523 26 HOH HOH . H 3 HOH B 24 524 120 HOH HOH . H 3 HOH B 25 525 71 HOH HOH . H 3 HOH B 26 526 136 HOH HOH . I 3 HOH D 1 601 86 HOH HOH . I 3 HOH D 2 602 8 HOH HOH . I 3 HOH D 3 603 139 HOH HOH . I 3 HOH D 4 604 117 HOH HOH . I 3 HOH D 5 605 34 HOH HOH . I 3 HOH D 6 606 44 HOH HOH . I 3 HOH D 7 607 51 HOH HOH . I 3 HOH D 8 608 37 HOH HOH . I 3 HOH D 9 609 49 HOH HOH . I 3 HOH D 10 610 132 HOH HOH . I 3 HOH D 11 611 84 HOH HOH . I 3 HOH D 12 612 9 HOH HOH . I 3 HOH D 13 613 79 HOH HOH . I 3 HOH D 14 614 154 HOH HOH . I 3 HOH D 15 615 116 HOH HOH . I 3 HOH D 16 616 123 HOH HOH . I 3 HOH D 17 617 15 HOH HOH . I 3 HOH D 18 618 39 HOH HOH . I 3 HOH D 19 619 105 HOH HOH . I 3 HOH D 20 620 172 HOH HOH . I 3 HOH D 21 621 140 HOH HOH . I 3 HOH D 22 622 109 HOH HOH . I 3 HOH D 23 623 6 HOH HOH . I 3 HOH D 24 624 31 HOH HOH . I 3 HOH D 25 625 83 HOH HOH . I 3 HOH D 26 626 155 HOH HOH . I 3 HOH D 27 627 96 HOH HOH . I 3 HOH D 28 628 110 HOH HOH . I 3 HOH D 29 629 38 HOH HOH . I 3 HOH D 30 630 135 HOH HOH . I 3 HOH D 31 631 13 HOH HOH . I 3 HOH D 32 632 27 HOH HOH . I 3 HOH D 33 633 74 HOH HOH . I 3 HOH D 34 634 64 HOH HOH . I 3 HOH D 35 635 1 HOH HOH . I 3 HOH D 36 636 2 HOH HOH . I 3 HOH D 37 637 29 HOH HOH . I 3 HOH D 38 638 133 HOH HOH . I 3 HOH D 39 639 70 HOH HOH . I 3 HOH D 40 640 144 HOH HOH . I 3 HOH D 41 641 56 HOH HOH . I 3 HOH D 42 642 87 HOH HOH . I 3 HOH D 43 643 160 HOH HOH . I 3 HOH D 44 644 137 HOH HOH . I 3 HOH D 45 645 62 HOH HOH . I 3 HOH D 46 646 55 HOH HOH . I 3 HOH D 47 647 158 HOH HOH . I 3 HOH D 48 648 53 HOH HOH . I 3 HOH D 49 649 25 HOH HOH . I 3 HOH D 50 650 50 HOH HOH . I 3 HOH D 51 651 147 HOH HOH . I 3 HOH D 52 652 122 HOH HOH . I 3 HOH D 53 653 227 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 O3G . . . E 2 -101.964 -14.946 -155.137 0.49 59.47 ? N1 O3G 501 D 1 HETATM 2 C C4 O3G . . . E 2 -101.006 -14.042 -153.079 0.49 55.27 ? C4 O3G 501 D 1 HETATM 3 C C5 O3G . . . E 2 -101.625 -13.716 -154.415 0.49 56.17 ? C5 O3G 501 D 1 HETATM 4 C C6 O3G . . . E 2 -101.754 -14.866 -156.586 0.49 60.36 ? C6 O3G 501 D 1 HETATM 5 C C7 O3G . . . E 2 -101.704 -16.232 -157.237 0.49 57.26 ? C7 O3G 501 D 1 HETATM 6 C C8 O3G . . . E 2 -102.779 -17.097 -157.149 0.49 58.03 ? C8 O3G 501 D 1 HETATM 7 C C10 O3G . . . E 2 -101.595 -18.76 -158.405 0.49 60.96 ? C10 O3G 501 D 1 HETATM 8 C C13 O3G . . . E 2 -99.811 -14.739 -153.012 0.49 55.17 ? C13 O3G 501 D 1 HETATM 9 C C1 O3G . . . E 2 -99.885 -14.693 -150.661 0.49 53.5 ? C1 O3G 501 D 1 HETATM 10 C C11 O3G . . . E 2 -100.527 -17.911 -158.506 0.49 58.59 ? C11 O3G 501 D 1 HETATM 11 C C12 O3G . . . E 2 -100.574 -16.657 -157.918 0.49 59.17 ? C12 O3G 501 D 1 HETATM 12 C C14 O3G . . . E 2 -99.231 -15.057 -151.795 0.49 54.31 ? C14 O3G 501 D 1 HETATM 13 C C2 O3G . . . E 2 -101.067 -14.023 -150.666 0.49 51.27 ? C2 O3G 501 D 1 HETATM 14 C C3 O3G . . . E 2 -101.625 -13.692 -151.892 0.49 53.56 ? C3 O3G 501 D 1 HETATM 15 C C9 O3G . . . E 2 -102.722 -18.353 -157.733 0.49 63.07 ? C9 O3G 501 D 1 HETATM 16 F F1 O3G . . . E 2 -99.331 -15.025 -149.469 0.49 64.64 ? F1 O3G 501 D 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 16 #