data_5QT5 # _model_server_result.job_id 9I7GnAXVnRV8yHIMk5xowA _model_server_result.datetime_utc '2025-01-11 06:06:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5qt5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 5QT5 # _exptl.entry_id 5QT5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.168 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-ethylpyridin-2-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5QT5 _cell.length_a 61.011 _cell.length_b 61.011 _cell.length_c 342.962 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5QT5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 x-y,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C7 H10 N2' _chem_comp.formula_weight 122.168 _chem_comp.id PBV _chem_comp.mon_nstd_flag . _chem_comp.name 6-ethylpyridin-2-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C5 C8 PBV doub 246 n y C5 C2 PBV sing 247 n y C8 C6 PBV sing 248 n y C2 C1 PBV doub 249 n y C6 N9 PBV sing 250 n n C6 N3 PBV doub 251 n y C1 N3 PBV sing 252 n y C1 C4 PBV sing 253 n n C4 C7 PBV sing 254 n n C2 H1 PBV sing 255 n n C4 H2 PBV sing 256 n n C4 H3 PBV sing 257 n n C5 H4 PBV sing 258 n n C7 H5 PBV sing 259 n n C7 H6 PBV sing 260 n n C7 H7 PBV sing 261 n n C8 H8 PBV sing 262 n n N9 H9 PBV sing 263 n n N9 H10 PBV sing 264 n n # _atom_sites.entry_id 5QT5 _atom_sites.fract_transf_matrix[1][1] 0.01639 _atom_sites.fract_transf_matrix[1][2] 0.009463 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018926 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002916 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PBV A 1 401 401 PBV LI1 . C 3 PEG A 1 402 1 PEG PEG . D 4 DMS A 1 403 2 DMS DMS . E 5 HOH A 1 501 36 HOH HOH . E 5 HOH A 2 502 31 HOH HOH . E 5 HOH A 3 503 27 HOH HOH . E 5 HOH A 4 504 53 HOH HOH . E 5 HOH A 5 505 7 HOH HOH . E 5 HOH A 6 506 14 HOH HOH . E 5 HOH A 7 507 4 HOH HOH . E 5 HOH A 8 508 28 HOH HOH . E 5 HOH A 9 509 54 HOH HOH . E 5 HOH A 10 510 9 HOH HOH . E 5 HOH A 11 511 44 HOH HOH . E 5 HOH A 12 512 33 HOH HOH . E 5 HOH A 13 513 38 HOH HOH . E 5 HOH A 14 514 5 HOH HOH . E 5 HOH A 15 515 2 HOH HOH . E 5 HOH A 16 516 6 HOH HOH . E 5 HOH A 17 517 8 HOH HOH . E 5 HOH A 18 518 25 HOH HOH . E 5 HOH A 19 519 13 HOH HOH . E 5 HOH A 20 520 49 HOH HOH . E 5 HOH A 21 521 16 HOH HOH . E 5 HOH A 22 522 10 HOH HOH . E 5 HOH A 23 523 12 HOH HOH . E 5 HOH A 24 524 32 HOH HOH . E 5 HOH A 25 525 34 HOH HOH . E 5 HOH A 26 526 50 HOH HOH . E 5 HOH A 27 527 42 HOH HOH . E 5 HOH A 28 528 24 HOH HOH . E 5 HOH A 29 529 29 HOH HOH . E 5 HOH A 30 530 19 HOH HOH . E 5 HOH A 31 531 30 HOH HOH . E 5 HOH A 32 532 15 HOH HOH . E 5 HOH A 33 533 26 HOH HOH . E 5 HOH A 34 534 47 HOH HOH . E 5 HOH A 35 535 37 HOH HOH . E 5 HOH A 36 536 43 HOH HOH . E 5 HOH A 37 537 3 HOH HOH . E 5 HOH A 38 538 35 HOH HOH . E 5 HOH A 39 539 52 HOH HOH . E 5 HOH A 40 540 23 HOH HOH . E 5 HOH A 41 541 48 HOH HOH . E 5 HOH A 42 542 21 HOH HOH . E 5 HOH A 43 543 41 HOH HOH . E 5 HOH A 44 544 39 HOH HOH . E 5 HOH A 45 545 17 HOH HOH . E 5 HOH A 46 546 22 HOH HOH . E 5 HOH A 47 547 46 HOH HOH . E 5 HOH A 48 548 20 HOH HOH . E 5 HOH A 49 549 40 HOH HOH . E 5 HOH A 50 550 18 HOH HOH . E 5 HOH A 51 551 45 HOH HOH . E 5 HOH A 52 552 55 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PBV . . . B 2 8.62 5.547 -8.874 0.7 23.28 ? C1 PBV 401 A 1 HETATM 2 C C2 PBV . . . B 2 7.405 5.401 -9.553 0.7 25.31 ? C2 PBV 401 A 1 HETATM 3 C C4 PBV . . . B 2 9.394 4.335 -8.346 0.7 18.37 ? C4 PBV 401 A 1 HETATM 4 C C5 PBV . . . B 2 6.737 6.535 -10.017 0.7 25.16 ? C5 PBV 401 A 1 HETATM 5 C C6 PBV . . . B 2 8.511 7.895 -9.113 0.7 19.97 ? C6 PBV 401 A 1 HETATM 6 C C7 PBV . . . B 2 9.278 4.264 -6.805 0.7 13.58 ? C7 PBV 401 A 1 HETATM 7 C C8 PBV . . . B 2 7.294 7.797 -9.795 0.7 23.7 ? C8 PBV 401 A 1 HETATM 8 N N3 PBV . . . B 2 9.133 6.78 -8.676 0.7 23.54 ? N3 PBV 401 A 1 HETATM 9 N N9 PBV . . . B 2 9.084 9.098 -8.878 0.7 18.65 ? N9 PBV 401 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 9 #