data_5QTA # _model_server_result.job_id PKi8nQvHCTlBmu7NvpFuqw _model_server_result.datetime_utc '2025-01-11 06:31:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5qta # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 5QTA # _exptl.entry_id 5QTA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 239.119 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,3-dichloro-2-[(methylsulfonyl)methyl]benzene _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5QTA _cell.length_a 60.744 _cell.length_b 60.744 _cell.length_c 341.292 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5QTA _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 x-y,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H8 Cl2 O2 S' _chem_comp.formula_weight 239.119 _chem_comp.id PJD _chem_comp.mon_nstd_flag . _chem_comp.name 1,3-dichloro-2-[(methylsulfonyl)methyl]benzene _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL9 C4 PJD sing 285 n n C4 C8 PJD doub 286 n y C4 C1 PJD sing 287 n y C8 C13 PJD sing 288 n y C2 C1 PJD sing 289 n n C2 S5 PJD sing 290 n n C1 C3 PJD doub 291 n y C13 C6 PJD doub 292 n y C3 C6 PJD sing 293 n y C3 CL7 PJD sing 294 n n O11 S5 PJD doub 295 n n S5 O12 PJD doub 296 n n S5 C10 PJD sing 297 n n C2 H1 PJD sing 298 n n C2 H2 PJD sing 299 n n C13 H3 PJD sing 300 n n C10 H4 PJD sing 301 n n C10 H5 PJD sing 302 n n C10 H6 PJD sing 303 n n C6 H7 PJD sing 304 n n C8 H8 PJD sing 305 n n # _atom_sites.entry_id 5QTA _atom_sites.fract_transf_matrix[1][1] 0.016463 _atom_sites.fract_transf_matrix[1][2] 0.009505 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019009 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00293 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PJD A 1 401 401 PJD LI1 . C 3 PEG A 1 402 1 PEG PEG . D 4 DMS A 1 403 2 DMS DMS . E 5 HOH A 1 501 1 HOH HOH . E 5 HOH A 2 502 35 HOH HOH . E 5 HOH A 3 503 48 HOH HOH . E 5 HOH A 4 504 16 HOH HOH . E 5 HOH A 5 505 49 HOH HOH . E 5 HOH A 6 506 5 HOH HOH . E 5 HOH A 7 507 38 HOH HOH . E 5 HOH A 8 508 42 HOH HOH . E 5 HOH A 9 509 13 HOH HOH . E 5 HOH A 10 510 25 HOH HOH . E 5 HOH A 11 511 8 HOH HOH . E 5 HOH A 12 512 29 HOH HOH . E 5 HOH A 13 513 20 HOH HOH . E 5 HOH A 14 514 9 HOH HOH . E 5 HOH A 15 515 56 HOH HOH . E 5 HOH A 16 516 6 HOH HOH . E 5 HOH A 17 517 28 HOH HOH . E 5 HOH A 18 518 27 HOH HOH . E 5 HOH A 19 519 51 HOH HOH . E 5 HOH A 20 520 54 HOH HOH . E 5 HOH A 21 521 7 HOH HOH . E 5 HOH A 22 522 53 HOH HOH . E 5 HOH A 23 523 14 HOH HOH . E 5 HOH A 24 524 10 HOH HOH . E 5 HOH A 25 525 2 HOH HOH . E 5 HOH A 26 526 46 HOH HOH . E 5 HOH A 27 527 11 HOH HOH . E 5 HOH A 28 528 40 HOH HOH . E 5 HOH A 29 529 34 HOH HOH . E 5 HOH A 30 530 41 HOH HOH . E 5 HOH A 31 531 36 HOH HOH . E 5 HOH A 32 532 3 HOH HOH . E 5 HOH A 33 533 4 HOH HOH . E 5 HOH A 34 534 12 HOH HOH . E 5 HOH A 35 535 17 HOH HOH . E 5 HOH A 36 536 30 HOH HOH . E 5 HOH A 37 537 21 HOH HOH . E 5 HOH A 38 538 26 HOH HOH . E 5 HOH A 39 539 18 HOH HOH . E 5 HOH A 40 540 33 HOH HOH . E 5 HOH A 41 541 31 HOH HOH . E 5 HOH A 42 542 47 HOH HOH . E 5 HOH A 43 543 55 HOH HOH . E 5 HOH A 44 544 24 HOH HOH . E 5 HOH A 45 545 15 HOH HOH . E 5 HOH A 46 546 52 HOH HOH . E 5 HOH A 47 547 39 HOH HOH . E 5 HOH A 48 548 23 HOH HOH . E 5 HOH A 49 549 32 HOH HOH . E 5 HOH A 50 550 57 HOH HOH . E 5 HOH A 51 551 43 HOH HOH . E 5 HOH A 52 552 45 HOH HOH . E 5 HOH A 53 553 19 HOH HOH . E 5 HOH A 54 554 22 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PJD . . . B 2 1.613 18.762 -14.071 0.68 76.66 ? C1 PJD 401 A 1 HETATM 2 C C2 PJD . . . B 2 2.559 17.564 -14.268 0.68 76.41 ? C2 PJD 401 A 1 HETATM 3 C C3 PJD . . . B 2 0.344 18.583 -13.501 0.68 73.9 ? C3 PJD 401 A 1 HETATM 4 C C13 PJD . . . B 2 -0.122 20.952 -13.716 0.68 80.86 ? C13 PJD 401 A 1 HETATM 5 C C10 PJD . . . B 2 2.668 17.074 -11.487 0.68 77.16 ? C10 PJD 401 A 1 HETATM 6 C C4 PJD . . . B 2 2 20.052 -14.465 0.68 81.43 ? C4 PJD 401 A 1 HETATM 7 C C6 PJD . . . B 2 -0.515 19.672 -13.324 0.68 77.25 ? C6 PJD 401 A 1 HETATM 8 C C8 PJD . . . B 2 1.137 21.137 -14.287 0.68 83.24 ? C8 PJD 401 A 1 HETATM 9 O O11 PJD . . . B 2 4.671 16.463 -13.1 0.68 80.74 ? O11 PJD 401 A 1 HETATM 10 O O12 PJD . . . B 2 4.232 18.863 -12.648 0.68 83.14 ? O12 PJD 401 A 1 HETATM 11 S S5 PJD . . . B 2 3.713 17.529 -12.881 0.68 80.74 ? S5 PJD 401 A 1 HETATM 12 CL CL7 PJD . . . B 2 -0.214 17.003 -12.986 0.68 69.79 ? CL7 PJD 401 A 1 HETATM 13 CL CL9 PJD . . . B 2 3.568 20.357 -15.189 0.68 84.64 ? CL9 PJD 401 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 13 #