data_5QTG # _model_server_result.job_id l7HLdrvQPDOFzwqIeXCICw _model_server_result.datetime_utc '2024-11-07 23:31:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5qtg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 5QTG # _exptl.entry_id 5QTG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5QTG _cell.length_a 60.356 _cell.length_b 60.356 _cell.length_c 344.868 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5QTG _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 x-y,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 95 A GLU 93 1_555 D NA NA . A NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.944 ? metalc ? metalc2 D NA NA . A NA 403 1_555 G O HOH . A HOH 544 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.503 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 296 n n P O2 PO4 sing 297 n n P O3 PO4 sing 298 n n P O4 PO4 sing 299 n n # _atom_sites.entry_id 5QTG _atom_sites.fract_transf_matrix[1][1] 0.016568 _atom_sites.fract_transf_matrix[1][2] 0.009566 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019131 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0029 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PK4 A 1 401 401 PK4 LI1 . C 3 PO4 A 1 402 3 PO4 PO4 . D 4 NA A 1 403 4 NA NA . E 3 PO4 A 1 404 401 PO4 PO4 . F 5 GOL A 1 405 501 GOL GOL . G 6 HOH A 1 501 46 HOH HOH . G 6 HOH A 2 502 34 HOH HOH . G 6 HOH A 3 503 36 HOH HOH . G 6 HOH A 4 504 35 HOH HOH . G 6 HOH A 5 505 21 HOH HOH . G 6 HOH A 6 506 27 HOH HOH . G 6 HOH A 7 507 29 HOH HOH . G 6 HOH A 8 508 10 HOH HOH . G 6 HOH A 9 509 13 HOH HOH . G 6 HOH A 10 510 5 HOH HOH . G 6 HOH A 11 511 32 HOH HOH . G 6 HOH A 12 512 28 HOH HOH . G 6 HOH A 13 513 57 HOH HOH . G 6 HOH A 14 514 33 HOH HOH . G 6 HOH A 15 515 7 HOH HOH . G 6 HOH A 16 516 39 HOH HOH . G 6 HOH A 17 517 8 HOH HOH . G 6 HOH A 18 518 22 HOH HOH . G 6 HOH A 19 519 4 HOH HOH . G 6 HOH A 20 520 63 HOH HOH . G 6 HOH A 21 521 45 HOH HOH . G 6 HOH A 22 522 6 HOH HOH . G 6 HOH A 23 523 58 HOH HOH . G 6 HOH A 24 524 42 HOH HOH . G 6 HOH A 25 525 54 HOH HOH . G 6 HOH A 26 526 40 HOH HOH . G 6 HOH A 27 527 3 HOH HOH . G 6 HOH A 28 528 9 HOH HOH . G 6 HOH A 29 529 1 HOH HOH . G 6 HOH A 30 530 19 HOH HOH . G 6 HOH A 31 531 20 HOH HOH . G 6 HOH A 32 532 12 HOH HOH . G 6 HOH A 33 533 2 HOH HOH . G 6 HOH A 34 534 62 HOH HOH . G 6 HOH A 35 535 25 HOH HOH . G 6 HOH A 36 536 11 HOH HOH . G 6 HOH A 37 537 38 HOH HOH . G 6 HOH A 38 538 16 HOH HOH . G 6 HOH A 39 539 59 HOH HOH . G 6 HOH A 40 540 48 HOH HOH . G 6 HOH A 41 541 15 HOH HOH . G 6 HOH A 42 542 23 HOH HOH . G 6 HOH A 43 543 49 HOH HOH . G 6 HOH A 44 544 18 HOH HOH . G 6 HOH A 45 545 37 HOH HOH . G 6 HOH A 46 546 26 HOH HOH . G 6 HOH A 47 547 52 HOH HOH . G 6 HOH A 48 548 50 HOH HOH . G 6 HOH A 49 549 44 HOH HOH . G 6 HOH A 50 550 17 HOH HOH . G 6 HOH A 51 551 47 HOH HOH . G 6 HOH A 52 552 30 HOH HOH . G 6 HOH A 53 553 41 HOH HOH . G 6 HOH A 54 554 64 HOH HOH . G 6 HOH A 55 555 24 HOH HOH . G 6 HOH A 56 556 51 HOH HOH . G 6 HOH A 57 557 55 HOH HOH . G 6 HOH A 58 558 56 HOH HOH . G 6 HOH A 59 559 53 HOH HOH . G 6 HOH A 60 560 61 HOH HOH . G 6 HOH A 61 561 60 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . C 3 -5.282 0.768 14.335 1 177.03 ? P PO4 402 A 1 HETATM 2 O O1 PO4 . . . C 3 -4.954 1.191 12.924 1 177.17 ? O1 PO4 402 A 1 HETATM 3 O O2 PO4 . . . C 3 -6.341 1.692 14.891 1 176.7 ? O2 PO4 402 A 1 HETATM 4 O O3 PO4 . . . C 3 -5.818 -0.641 14.321 1 177.46 ? O3 PO4 402 A 1 HETATM 5 O O4 PO4 . . . C 3 -4.044 0.828 15.195 1 175.77 ? O4 PO4 402 A 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 5 #