data_5R08
#
_model_server_result.job_id            J6-B2odvfnfIW55uOmEfYQ 
_model_server_result.datetime_utc      '2025-01-13 02:47:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5r08 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":401}' 
#
_entry.id    5R08 
#
_exptl.entry_id    5R08 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              124.141 
_entity.id                          3 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            (2-aminopyridin-3-yl)methanol 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          108.65 
_cell.angle_gamma         90 
_cell.entry_id            5R08 
_cell.length_a            88.682 
_cell.length_b            82.264 
_cell.length_c            93.701 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5R08 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C6 H8 N2 O' 
_chem_comp.formula_weight    124.141 
_chem_comp.id                R8A 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (2-aminopyridin-3-yl)methanol 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C5 O R8A sing 277 n n 
C5 C2 R8A sing 278 n n 
N1 C3 R8A sing 279 n n 
C2 C3 R8A doub 280 n y 
C2 C1 R8A sing 281 n y 
C3 N R8A sing 282 n y 
C1 C R8A doub 283 n y 
N C4 R8A doub 284 n y 
C C4 R8A sing 285 n y 
C4 H1 R8A sing 286 n n 
C5 H2 R8A sing 287 n n 
C5 H3 R8A sing 288 n n 
N1 H4 R8A sing 289 n n 
N1 H5 R8A sing 290 n n 
O H6 R8A sing 291 n n 
C1 H7 R8A sing 292 n n 
C H8 R8A sing 293 n n 
#
_atom_sites.entry_id                     5R08 
_atom_sites.fract_transf_matrix[1][1]    0.011276 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003806 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012156 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011264 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 R8A B 1 401 401 R8A XXX . 
D 4 HOH A 1 2101 85 HOH HOH . 
D 4 HOH A 2 2102 3 HOH HOH . 
D 4 HOH A 3 2103 36 HOH HOH . 
D 4 HOH A 4 2104 84 HOH HOH . 
D 4 HOH A 5 2105 29 HOH HOH . 
D 4 HOH A 6 2106 18 HOH HOH . 
D 4 HOH A 7 2107 5 HOH HOH . 
D 4 HOH A 8 2108 86 HOH HOH . 
D 4 HOH A 9 2109 35 HOH HOH . 
D 4 HOH A 10 2110 15 HOH HOH . 
D 4 HOH A 11 2111 40 HOH HOH . 
D 4 HOH A 12 2112 83 HOH HOH . 
D 4 HOH A 13 2113 16 HOH HOH . 
D 4 HOH A 14 2114 13 HOH HOH . 
D 4 HOH A 15 2115 20 HOH HOH . 
D 4 HOH A 16 2116 65 HOH HOH . 
D 4 HOH A 17 2117 57 HOH HOH . 
D 4 HOH A 18 2118 2 HOH HOH . 
D 4 HOH A 19 2119 88 HOH HOH . 
D 4 HOH A 20 2120 77 HOH HOH . 
D 4 HOH A 21 2121 66 HOH HOH . 
D 4 HOH A 22 2122 24 HOH HOH . 
D 4 HOH A 23 2123 12 HOH HOH . 
D 4 HOH A 24 2124 44 HOH HOH . 
D 4 HOH A 25 2125 75 HOH HOH . 
D 4 HOH A 26 2126 6 HOH HOH . 
D 4 HOH A 27 2127 25 HOH HOH . 
D 4 HOH A 28 2128 38 HOH HOH . 
D 4 HOH A 29 2129 9 HOH HOH . 
D 4 HOH A 30 2130 78 HOH HOH . 
D 4 HOH A 31 2131 11 HOH HOH . 
D 4 HOH A 32 2132 81 HOH HOH . 
D 4 HOH A 33 2133 39 HOH HOH . 
D 4 HOH A 34 2134 7 HOH HOH . 
D 4 HOH A 35 2135 30 HOH HOH . 
D 4 HOH A 36 2136 80 HOH HOH . 
D 4 HOH A 37 2137 8 HOH HOH . 
D 4 HOH A 38 2138 10 HOH HOH . 
D 4 HOH A 39 2139 28 HOH HOH . 
D 4 HOH A 40 2140 21 HOH HOH . 
D 4 HOH A 41 2141 50 HOH HOH . 
D 4 HOH A 42 2142 55 HOH HOH . 
D 4 HOH A 43 2143 31 HOH HOH . 
D 4 HOH A 44 2144 79 HOH HOH . 
D 4 HOH A 45 2145 42 HOH HOH . 
D 4 HOH A 46 2146 64 HOH HOH . 
D 4 HOH A 47 2147 52 HOH HOH . 
D 4 HOH A 48 2148 62 HOH HOH . 
D 4 HOH A 49 2149 71 HOH HOH . 
D 4 HOH A 50 2150 74 HOH HOH . 
D 4 HOH A 51 2151 41 HOH HOH . 
D 4 HOH A 52 2152 76 HOH HOH . 
D 4 HOH A 53 2153 67 HOH HOH . 
D 4 HOH A 54 2154 53 HOH HOH . 
E 4 HOH B 1 501 82 HOH HOH . 
E 4 HOH B 2 502 89 HOH HOH . 
E 4 HOH B 3 503 4 HOH HOH . 
E 4 HOH B 4 504 54 HOH HOH . 
E 4 HOH B 5 505 73 HOH HOH . 
E 4 HOH B 6 506 48 HOH HOH . 
E 4 HOH B 7 507 51 HOH HOH . 
E 4 HOH B 8 508 17 HOH HOH . 
E 4 HOH B 9 509 26 HOH HOH . 
E 4 HOH B 10 510 58 HOH HOH . 
E 4 HOH B 11 511 49 HOH HOH . 
E 4 HOH B 12 512 69 HOH HOH . 
E 4 HOH B 13 513 33 HOH HOH . 
E 4 HOH B 14 514 37 HOH HOH . 
E 4 HOH B 15 515 43 HOH HOH . 
E 4 HOH B 16 516 47 HOH HOH . 
E 4 HOH B 17 517 19 HOH HOH . 
E 4 HOH B 18 518 34 HOH HOH . 
E 4 HOH B 19 519 63 HOH HOH . 
E 4 HOH B 20 520 32 HOH HOH . 
E 4 HOH B 21 521 60 HOH HOH . 
E 4 HOH B 22 522 87 HOH HOH . 
E 4 HOH B 23 523 27 HOH HOH . 
E 4 HOH B 24 524 72 HOH HOH . 
E 4 HOH B 25 525 46 HOH HOH . 
E 4 HOH B 26 526 59 HOH HOH . 
E 4 HOH B 27 527 23 HOH HOH . 
E 4 HOH B 28 528 45 HOH HOH . 
E 4 HOH B 29 529 22 HOH HOH . 
E 4 HOH B 30 530 14 HOH HOH . 
E 4 HOH B 31 531 70 HOH HOH . 
E 4 HOH B 32 532 61 HOH HOH . 
E 4 HOH B 33 533 90 HOH HOH . 
E 4 HOH B 34 534 56 HOH HOH . 
E 4 HOH B 35 535 68 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 R8A . . . C 3 11.012 1.559 -13.34 0.56 20 ? C4 R8A 401 B 1 
HETATM 2 C C5 R8A . . . C 3 10.613 -0.019 -9.441 0.56 20 ? C5 R8A 401 B 1 
HETATM 3 N N1 R8A . . . C 3 10.582 -1.573 -11.867 0.56 20 ? N1 R8A 401 B 1 
HETATM 4 O O R8A . . . C 3 9.32 -0.463 -9.171 0.56 20 ? O R8A 401 B 1 
HETATM 5 C C2 R8A . . . C 3 10.743 0.559 -10.826 0.56 20 ? C2 R8A 401 B 1 
HETATM 6 C C1 R8A . . . C 3 10.813 1.918 -11.028 0.56 20 ? C1 R8A 401 B 1 
HETATM 7 C C3 R8A . . . C 3 10.794 -0.278 -11.97 0.56 20 ? C3 R8A 401 B 1 
HETATM 8 N N R8A . . . C 3 10.949 0.236 -13.204 0.56 20 ? N R8A 401 B 1 
HETATM 9 C C R8A . . . C 3 10.948 2.425 -12.298 0.56 20 ? C R8A 401 B 1 
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_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           319 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           9 
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