data_5R0A # _model_server_result.job_id usmykpPznE_hPGmGQk9z8w _model_server_result.datetime_utc '2024-11-17 07:33:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5r0a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 5R0A # _exptl.entry_id 5R0A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 206.119 _entity.id 3 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description '2,4,5-tris(fluoranyl)-3-methoxy-benzoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.51 _cell.angle_gamma 90 _cell.entry_id 5R0A _cell.length_a 88.201 _cell.length_b 81.928 _cell.length_c 93.721 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5R0A _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H5 F3 O3' _chem_comp.formula_weight 206.119 _chem_comp.id SYA _chem_comp.mon_nstd_flag . _chem_comp.name '2,4,5-tris(fluoranyl)-3-methoxy-benzoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O C SYA sing 290 n n O C1 SYA sing 291 n n F2 C2 SYA sing 292 n n C1 C2 SYA doub 293 n y C1 C6 SYA sing 294 n y F C6 SYA sing 295 n n C2 C3 SYA sing 296 n y C6 C5 SYA doub 297 n y C3 C4 SYA doub 298 n y C3 C7 SYA sing 299 n n C5 C4 SYA sing 300 n y C5 F1 SYA sing 301 n n C7 O1 SYA doub 302 n n C7 O2 SYA sing 303 n n C4 H1 SYA sing 304 n n O2 H2 SYA sing 305 n n C H3 SYA sing 306 n n C H4 SYA sing 307 n n C H5 SYA sing 308 n n # _atom_sites.entry_id 5R0A _atom_sites.fract_transf_matrix[1][1] 0.011338 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003795 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012206 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011252 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SYA B 1 401 401 SYA XXX . D 4 HOH A 1 2101 126 HOH HOH . D 4 HOH A 2 2102 125 HOH HOH . D 4 HOH A 3 2103 45 HOH HOH . D 4 HOH A 4 2104 109 HOH HOH . D 4 HOH A 5 2105 12 HOH HOH . D 4 HOH A 6 2106 17 HOH HOH . D 4 HOH A 7 2107 8 HOH HOH . D 4 HOH A 8 2108 27 HOH HOH . D 4 HOH A 9 2109 16 HOH HOH . D 4 HOH A 10 2110 94 HOH HOH . D 4 HOH A 11 2111 77 HOH HOH . D 4 HOH A 12 2112 95 HOH HOH . D 4 HOH A 13 2113 30 HOH HOH . D 4 HOH A 14 2114 67 HOH HOH . D 4 HOH A 15 2115 15 HOH HOH . D 4 HOH A 16 2116 106 HOH HOH . D 4 HOH A 17 2117 89 HOH HOH . D 4 HOH A 18 2118 11 HOH HOH . D 4 HOH A 19 2119 88 HOH HOH . D 4 HOH A 20 2120 2 HOH HOH . D 4 HOH A 21 2121 116 HOH HOH . D 4 HOH A 22 2122 93 HOH HOH . D 4 HOH A 23 2123 10 HOH HOH . D 4 HOH A 24 2124 115 HOH HOH . D 4 HOH A 25 2125 98 HOH HOH . D 4 HOH A 26 2126 124 HOH HOH . D 4 HOH A 27 2127 19 HOH HOH . D 4 HOH A 28 2128 114 HOH HOH . D 4 HOH A 29 2129 59 HOH HOH . D 4 HOH A 30 2130 21 HOH HOH . D 4 HOH A 31 2131 33 HOH HOH . D 4 HOH A 32 2132 5 HOH HOH . D 4 HOH A 33 2133 127 HOH HOH . D 4 HOH A 34 2134 69 HOH HOH . D 4 HOH A 35 2135 18 HOH HOH . D 4 HOH A 36 2136 38 HOH HOH . D 4 HOH A 37 2137 56 HOH HOH . D 4 HOH A 38 2138 80 HOH HOH . D 4 HOH A 39 2139 90 HOH HOH . D 4 HOH A 40 2140 26 HOH HOH . D 4 HOH A 41 2141 61 HOH HOH . D 4 HOH A 42 2142 7 HOH HOH . D 4 HOH A 43 2143 4 HOH HOH . D 4 HOH A 44 2144 13 HOH HOH . D 4 HOH A 45 2145 34 HOH HOH . D 4 HOH A 46 2146 58 HOH HOH . D 4 HOH A 47 2147 57 HOH HOH . D 4 HOH A 48 2148 117 HOH HOH . D 4 HOH A 49 2149 64 HOH HOH . D 4 HOH A 50 2150 97 HOH HOH . D 4 HOH A 51 2151 28 HOH HOH . D 4 HOH A 52 2152 91 HOH HOH . D 4 HOH A 53 2153 110 HOH HOH . D 4 HOH A 54 2154 29 HOH HOH . D 4 HOH A 55 2155 40 HOH HOH . D 4 HOH A 56 2156 31 HOH HOH . D 4 HOH A 57 2157 102 HOH HOH . D 4 HOH A 58 2158 44 HOH HOH . D 4 HOH A 59 2159 111 HOH HOH . D 4 HOH A 60 2160 84 HOH HOH . D 4 HOH A 61 2161 73 HOH HOH . D 4 HOH A 62 2162 107 HOH HOH . D 4 HOH A 63 2163 105 HOH HOH . D 4 HOH A 64 2164 24 HOH HOH . D 4 HOH A 65 2165 74 HOH HOH . D 4 HOH A 66 2166 121 HOH HOH . D 4 HOH A 67 2167 113 HOH HOH . D 4 HOH A 68 2168 9 HOH HOH . D 4 HOH A 69 2169 96 HOH HOH . D 4 HOH A 70 2170 112 HOH HOH . D 4 HOH A 71 2171 120 HOH HOH . D 4 HOH A 72 2172 122 HOH HOH . D 4 HOH A 73 2173 104 HOH HOH . D 4 HOH A 74 2174 119 HOH HOH . E 4 HOH B 1 501 128 HOH HOH . E 4 HOH B 2 502 35 HOH HOH . E 4 HOH B 3 503 108 HOH HOH . E 4 HOH B 4 504 129 HOH HOH . E 4 HOH B 5 505 14 HOH HOH . E 4 HOH B 6 506 41 HOH HOH . E 4 HOH B 7 507 100 HOH HOH . E 4 HOH B 8 508 42 HOH HOH . E 4 HOH B 9 509 55 HOH HOH . E 4 HOH B 10 510 62 HOH HOH . E 4 HOH B 11 511 23 HOH HOH . E 4 HOH B 12 512 87 HOH HOH . E 4 HOH B 13 513 46 HOH HOH . E 4 HOH B 14 514 76 HOH HOH . E 4 HOH B 15 515 83 HOH HOH . E 4 HOH B 16 516 51 HOH HOH . E 4 HOH B 17 517 53 HOH HOH . E 4 HOH B 18 518 101 HOH HOH . E 4 HOH B 19 519 86 HOH HOH . E 4 HOH B 20 520 49 HOH HOH . E 4 HOH B 21 521 36 HOH HOH . E 4 HOH B 22 522 20 HOH HOH . E 4 HOH B 23 523 68 HOH HOH . E 4 HOH B 24 524 82 HOH HOH . E 4 HOH B 25 525 60 HOH HOH . E 4 HOH B 26 526 79 HOH HOH . E 4 HOH B 27 527 78 HOH HOH . E 4 HOH B 28 528 52 HOH HOH . E 4 HOH B 29 529 39 HOH HOH . E 4 HOH B 30 530 99 HOH HOH . E 4 HOH B 31 531 75 HOH HOH . E 4 HOH B 32 532 25 HOH HOH . E 4 HOH B 33 533 37 HOH HOH . E 4 HOH B 34 534 72 HOH HOH . E 4 HOH B 35 535 85 HOH HOH . E 4 HOH B 36 536 70 HOH HOH . E 4 HOH B 37 537 65 HOH HOH . E 4 HOH B 38 538 3 HOH HOH . E 4 HOH B 39 539 50 HOH HOH . E 4 HOH B 40 540 71 HOH HOH . E 4 HOH B 41 541 81 HOH HOH . E 4 HOH B 42 542 103 HOH HOH . E 4 HOH B 43 543 63 HOH HOH . E 4 HOH B 44 544 22 HOH HOH . E 4 HOH B 45 545 32 HOH HOH . E 4 HOH B 46 546 6 HOH HOH . E 4 HOH B 47 547 123 HOH HOH . E 4 HOH B 48 548 43 HOH HOH . E 4 HOH B 49 549 48 HOH HOH . E 4 HOH B 50 550 118 HOH HOH . E 4 HOH B 51 551 66 HOH HOH . E 4 HOH B 52 552 54 HOH HOH . E 4 HOH B 53 553 92 HOH HOH . E 4 HOH B 54 554 47 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 SYA . . . C 3 -2.638 14.031 -34.349 0.74 20 ? C4 SYA 401 B 1 HETATM 2 C C5 SYA . . . C 3 -1.819 12.997 -34.671 0.74 20 ? C5 SYA 401 B 1 HETATM 3 C C6 SYA . . . C 3 -0.683 13.197 -35.38 0.74 20 ? C6 SYA 401 B 1 HETATM 4 C C7 SYA . . . C 3 -3.257 16.343 -34.257 0.74 20 ? C7 SYA 401 B 1 HETATM 5 F F2 SYA . . . C 3 -0.946 16.675 -36.058 0.74 20 ? F2 SYA 401 B 1 HETATM 6 C C2 SYA . . . C 3 -1.191 15.482 -35.514 0.74 20 ? C2 SYA 401 B 1 HETATM 7 C C3 SYA . . . C 3 -2.308 15.303 -34.737 0.74 20 ? C3 SYA 401 B 1 HETATM 8 O O2 SYA . . . C 3 -2.857 17.447 -33.992 0.74 20 -1 O2 SYA 401 B 1 HETATM 9 O O1 SYA . . . C 3 -4.347 16.006 -34.097 0.74 20 ? O1 SYA 401 B 1 HETATM 10 F F1 SYA . . . C 3 -2.134 11.748 -34.321 0.74 20 ? F1 SYA 401 B 1 HETATM 11 F F SYA . . . C 3 0.11 12.148 -35.64 0.74 20 ? F SYA 401 B 1 HETATM 12 C C1 SYA . . . C 3 -0.369 14.437 -35.831 0.74 20 ? C1 SYA 401 B 1 HETATM 13 O O SYA . . . C 3 0.696 14.692 -36.615 0.74 20 ? O SYA 401 B 1 HETATM 14 C C SYA . . . C 3 1.899 14.033 -36.219 0.74 20 ? C SYA 401 B 1 # _model_server_stats.io_time_ms 51 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 14 #