data_5R0D # _model_server_result.job_id 5PGn7d6qw05SKBZcECtk-Q _model_server_result.datetime_utc '2024-11-01 03:39:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5r0d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":2501}' # _entry.id 5R0D # _exptl.entry_id 5R0D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 227.28 _entity.id 3 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description N-ethyl-N-(thiophene-2-carbonyl)-beta-alanine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.08 _cell.angle_gamma 90 _cell.entry_id 5R0D _cell.length_a 89.193 _cell.length_b 82.004 _cell.length_c 94.002 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5R0D _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H13 N O3 S' _chem_comp.formula_weight 227.28 _chem_comp.id R8Y _chem_comp.mon_nstd_flag . _chem_comp.name N-ethyl-N-(thiophene-2-carbonyl)-beta-alanine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O C4 R8Y doub 277 n n C C1 R8Y sing 278 n n C1 N R8Y sing 279 n n C4 C3 R8Y sing 280 n n C4 O1 R8Y sing 281 n n C3 C2 R8Y sing 282 n n C2 N R8Y sing 283 n n N C5 R8Y sing 284 n n O2 C5 R8Y doub 285 n n C5 C6 R8Y sing 286 n n C6 S R8Y sing 287 n y C6 C7 R8Y doub 288 n y S C9 R8Y sing 289 n y C7 C8 R8Y sing 290 n y C9 C8 R8Y doub 291 n y C7 H1 R8Y sing 292 n n C8 H2 R8Y sing 293 n n C9 H3 R8Y sing 294 n n C2 H4 R8Y sing 295 n n C2 H5 R8Y sing 296 n n C3 H6 R8Y sing 297 n n C3 H7 R8Y sing 298 n n O1 H8 R8Y sing 299 n n C1 H9 R8Y sing 300 n n C1 H10 R8Y sing 301 n n C H11 R8Y sing 302 n n C H12 R8Y sing 303 n n C H13 R8Y sing 304 n n # _atom_sites.entry_id 5R0D _atom_sites.fract_transf_matrix[1][1] 0.011212 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003877 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012195 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011256 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 R8Y A 1 2501 2501 R8Y XXX . D 4 HOH A 1 2601 250 HOH HOH . D 4 HOH A 2 2602 260 HOH HOH . D 4 HOH A 3 2603 3 HOH HOH . D 4 HOH A 4 2604 209 HOH HOH . D 4 HOH A 5 2605 137 HOH HOH . D 4 HOH A 6 2606 244 HOH HOH . D 4 HOH A 7 2607 51 HOH HOH . D 4 HOH A 8 2608 197 HOH HOH . D 4 HOH A 9 2609 86 HOH HOH . D 4 HOH A 10 2610 126 HOH HOH . D 4 HOH A 11 2611 77 HOH HOH . D 4 HOH A 12 2612 179 HOH HOH . D 4 HOH A 13 2613 98 HOH HOH . D 4 HOH A 14 2614 10 HOH HOH . D 4 HOH A 15 2615 169 HOH HOH . D 4 HOH A 16 2616 156 HOH HOH . D 4 HOH A 17 2617 47 HOH HOH . D 4 HOH A 18 2618 90 HOH HOH . D 4 HOH A 19 2619 205 HOH HOH . D 4 HOH A 20 2620 4 HOH HOH . D 4 HOH A 21 2621 135 HOH HOH . D 4 HOH A 22 2622 116 HOH HOH . D 4 HOH A 23 2623 11 HOH HOH . D 4 HOH A 24 2624 7 HOH HOH . D 4 HOH A 25 2625 33 HOH HOH . D 4 HOH A 26 2626 13 HOH HOH . D 4 HOH A 27 2627 178 HOH HOH . D 4 HOH A 28 2628 193 HOH HOH . D 4 HOH A 29 2629 22 HOH HOH . D 4 HOH A 30 2630 62 HOH HOH . D 4 HOH A 31 2631 173 HOH HOH . D 4 HOH A 32 2632 140 HOH HOH . D 4 HOH A 33 2633 96 HOH HOH . D 4 HOH A 34 2634 217 HOH HOH . D 4 HOH A 35 2635 255 HOH HOH . D 4 HOH A 36 2636 50 HOH HOH . D 4 HOH A 37 2637 42 HOH HOH . D 4 HOH A 38 2638 191 HOH HOH . D 4 HOH A 39 2639 201 HOH HOH . D 4 HOH A 40 2640 229 HOH HOH . D 4 HOH A 41 2641 175 HOH HOH . D 4 HOH A 42 2642 235 HOH HOH . D 4 HOH A 43 2643 119 HOH HOH . D 4 HOH A 44 2644 53 HOH HOH . D 4 HOH A 45 2645 2 HOH HOH . D 4 HOH A 46 2646 25 HOH HOH . D 4 HOH A 47 2647 82 HOH HOH . D 4 HOH A 48 2648 39 HOH HOH . D 4 HOH A 49 2649 170 HOH HOH . D 4 HOH A 50 2650 154 HOH HOH . D 4 HOH A 51 2651 237 HOH HOH . D 4 HOH A 52 2652 246 HOH HOH . D 4 HOH A 53 2653 194 HOH HOH . D 4 HOH A 54 2654 72 HOH HOH . D 4 HOH A 55 2655 188 HOH HOH . D 4 HOH A 56 2656 18 HOH HOH . D 4 HOH A 57 2657 185 HOH HOH . D 4 HOH A 58 2658 70 HOH HOH . D 4 HOH A 59 2659 46 HOH HOH . D 4 HOH A 60 2660 122 HOH HOH . D 4 HOH A 61 2661 8 HOH HOH . D 4 HOH A 62 2662 204 HOH HOH . D 4 HOH A 63 2663 21 HOH HOH . D 4 HOH A 64 2664 124 HOH HOH . D 4 HOH A 65 2665 184 HOH HOH . D 4 HOH A 66 2666 15 HOH HOH . D 4 HOH A 67 2667 258 HOH HOH . D 4 HOH A 68 2668 75 HOH HOH . D 4 HOH A 69 2669 6 HOH HOH . D 4 HOH A 70 2670 196 HOH HOH . D 4 HOH A 71 2671 14 HOH HOH . D 4 HOH A 72 2672 23 HOH HOH . D 4 HOH A 73 2673 163 HOH HOH . D 4 HOH A 74 2674 69 HOH HOH . D 4 HOH A 75 2675 172 HOH HOH . D 4 HOH A 76 2676 223 HOH HOH . D 4 HOH A 77 2677 9 HOH HOH . D 4 HOH A 78 2678 27 HOH HOH . D 4 HOH A 79 2679 95 HOH HOH . D 4 HOH A 80 2680 61 HOH HOH . D 4 HOH A 81 2681 34 HOH HOH . D 4 HOH A 82 2682 87 HOH HOH . D 4 HOH A 83 2683 113 HOH HOH . D 4 HOH A 84 2684 12 HOH HOH . D 4 HOH A 85 2685 148 HOH HOH . D 4 HOH A 86 2686 159 HOH HOH . D 4 HOH A 87 2687 106 HOH HOH . D 4 HOH A 88 2688 133 HOH HOH . D 4 HOH A 89 2689 131 HOH HOH . D 4 HOH A 90 2690 81 HOH HOH . D 4 HOH A 91 2691 207 HOH HOH . D 4 HOH A 92 2692 252 HOH HOH . D 4 HOH A 93 2693 111 HOH HOH . D 4 HOH A 94 2694 17 HOH HOH . D 4 HOH A 95 2695 58 HOH HOH . D 4 HOH A 96 2696 44 HOH HOH . D 4 HOH A 97 2697 211 HOH HOH . D 4 HOH A 98 2698 134 HOH HOH . D 4 HOH A 99 2699 40 HOH HOH . D 4 HOH A 100 2700 242 HOH HOH . D 4 HOH A 101 2701 65 HOH HOH . D 4 HOH A 102 2702 67 HOH HOH . D 4 HOH A 103 2703 151 HOH HOH . D 4 HOH A 104 2704 89 HOH HOH . D 4 HOH A 105 2705 256 HOH HOH . D 4 HOH A 106 2706 239 HOH HOH . D 4 HOH A 107 2707 107 HOH HOH . D 4 HOH A 108 2708 226 HOH HOH . D 4 HOH A 109 2709 30 HOH HOH . D 4 HOH A 110 2710 118 HOH HOH . D 4 HOH A 111 2711 88 HOH HOH . D 4 HOH A 112 2712 162 HOH HOH . D 4 HOH A 113 2713 222 HOH HOH . D 4 HOH A 114 2714 145 HOH HOH . D 4 HOH A 115 2715 167 HOH HOH . D 4 HOH A 116 2716 130 HOH HOH . D 4 HOH A 117 2717 120 HOH HOH . D 4 HOH A 118 2718 144 HOH HOH . D 4 HOH A 119 2719 183 HOH HOH . D 4 HOH A 120 2720 139 HOH HOH . D 4 HOH A 121 2721 165 HOH HOH . D 4 HOH A 122 2722 54 HOH HOH . D 4 HOH A 123 2723 214 HOH HOH . D 4 HOH A 124 2724 251 HOH HOH . D 4 HOH A 125 2725 37 HOH HOH . D 4 HOH A 126 2726 129 HOH HOH . D 4 HOH A 127 2727 245 HOH HOH . D 4 HOH A 128 2728 20 HOH HOH . D 4 HOH A 129 2729 85 HOH HOH . D 4 HOH A 130 2730 79 HOH HOH . D 4 HOH A 131 2731 232 HOH HOH . D 4 HOH A 132 2732 221 HOH HOH . D 4 HOH A 133 2733 164 HOH HOH . D 4 HOH A 134 2734 94 HOH HOH . D 4 HOH A 135 2735 168 HOH HOH . D 4 HOH A 136 2736 227 HOH HOH . D 4 HOH A 137 2737 180 HOH HOH . D 4 HOH A 138 2738 125 HOH HOH . D 4 HOH A 139 2739 28 HOH HOH . D 4 HOH A 140 2740 152 HOH HOH . D 4 HOH A 141 2741 115 HOH HOH . D 4 HOH A 142 2742 233 HOH HOH . D 4 HOH A 143 2743 181 HOH HOH . D 4 HOH A 144 2744 213 HOH HOH . D 4 HOH A 145 2745 230 HOH HOH . D 4 HOH A 146 2746 225 HOH HOH . E 4 HOH B 1 401 127 HOH HOH . E 4 HOH B 2 402 147 HOH HOH . E 4 HOH B 3 403 161 HOH HOH . E 4 HOH B 4 404 198 HOH HOH . E 4 HOH B 5 405 254 HOH HOH . E 4 HOH B 6 406 78 HOH HOH . E 4 HOH B 7 407 64 HOH HOH . E 4 HOH B 8 408 259 HOH HOH . E 4 HOH B 9 409 238 HOH HOH . E 4 HOH B 10 410 38 HOH HOH . E 4 HOH B 11 411 5 HOH HOH . E 4 HOH B 12 412 218 HOH HOH . E 4 HOH B 13 413 234 HOH HOH . E 4 HOH B 14 414 29 HOH HOH . E 4 HOH B 15 415 253 HOH HOH . E 4 HOH B 16 416 219 HOH HOH . E 4 HOH B 17 417 49 HOH HOH . E 4 HOH B 18 418 56 HOH HOH . E 4 HOH B 19 419 212 HOH HOH . E 4 HOH B 20 420 155 HOH HOH . E 4 HOH B 21 421 83 HOH HOH . E 4 HOH B 22 422 112 HOH HOH . E 4 HOH B 23 423 71 HOH HOH . E 4 HOH B 24 424 16 HOH HOH . E 4 HOH B 25 425 206 HOH HOH . E 4 HOH B 26 426 97 HOH HOH . E 4 HOH B 27 427 105 HOH HOH . E 4 HOH B 28 428 68 HOH HOH . E 4 HOH B 29 429 153 HOH HOH . E 4 HOH B 30 430 66 HOH HOH . E 4 HOH B 31 431 186 HOH HOH . E 4 HOH B 32 432 157 HOH HOH . E 4 HOH B 33 433 110 HOH HOH . E 4 HOH B 34 434 136 HOH HOH . E 4 HOH B 35 435 176 HOH HOH . E 4 HOH B 36 436 149 HOH HOH . E 4 HOH B 37 437 146 HOH HOH . E 4 HOH B 38 438 59 HOH HOH . E 4 HOH B 39 439 241 HOH HOH . E 4 HOH B 40 440 63 HOH HOH . E 4 HOH B 41 441 19 HOH HOH . E 4 HOH B 42 442 160 HOH HOH . E 4 HOH B 43 443 32 HOH HOH . E 4 HOH B 44 444 123 HOH HOH . E 4 HOH B 45 445 195 HOH HOH . E 4 HOH B 46 446 48 HOH HOH . E 4 HOH B 47 447 174 HOH HOH . E 4 HOH B 48 448 73 HOH HOH . E 4 HOH B 49 449 177 HOH HOH . E 4 HOH B 50 450 108 HOH HOH . E 4 HOH B 51 451 99 HOH HOH . E 4 HOH B 52 452 36 HOH HOH . E 4 HOH B 53 453 24 HOH HOH . E 4 HOH B 54 454 41 HOH HOH . E 4 HOH B 55 455 171 HOH HOH . E 4 HOH B 56 456 80 HOH HOH . E 4 HOH B 57 457 52 HOH HOH . E 4 HOH B 58 458 45 HOH HOH . E 4 HOH B 59 459 93 HOH HOH . E 4 HOH B 60 460 114 HOH HOH . E 4 HOH B 61 461 55 HOH HOH . E 4 HOH B 62 462 192 HOH HOH . E 4 HOH B 63 463 26 HOH HOH . E 4 HOH B 64 464 240 HOH HOH . E 4 HOH B 65 465 31 HOH HOH . E 4 HOH B 66 466 142 HOH HOH . E 4 HOH B 67 467 128 HOH HOH . E 4 HOH B 68 468 216 HOH HOH . E 4 HOH B 69 469 43 HOH HOH . E 4 HOH B 70 470 92 HOH HOH . E 4 HOH B 71 471 210 HOH HOH . E 4 HOH B 72 472 103 HOH HOH . E 4 HOH B 73 473 203 HOH HOH . E 4 HOH B 74 474 102 HOH HOH . E 4 HOH B 75 475 74 HOH HOH . E 4 HOH B 76 476 215 HOH HOH . E 4 HOH B 77 477 200 HOH HOH . E 4 HOH B 78 478 228 HOH HOH . E 4 HOH B 79 479 132 HOH HOH . E 4 HOH B 80 480 202 HOH HOH . E 4 HOH B 81 481 231 HOH HOH . E 4 HOH B 82 482 57 HOH HOH . E 4 HOH B 83 483 190 HOH HOH . E 4 HOH B 84 484 109 HOH HOH . E 4 HOH B 85 485 121 HOH HOH . E 4 HOH B 86 486 101 HOH HOH . E 4 HOH B 87 487 35 HOH HOH . E 4 HOH B 88 488 60 HOH HOH . E 4 HOH B 89 489 104 HOH HOH . E 4 HOH B 90 490 189 HOH HOH . E 4 HOH B 91 491 236 HOH HOH . E 4 HOH B 92 492 243 HOH HOH . E 4 HOH B 93 493 76 HOH HOH . E 4 HOH B 94 494 208 HOH HOH . E 4 HOH B 95 495 249 HOH HOH . E 4 HOH B 96 496 199 HOH HOH . E 4 HOH B 97 497 166 HOH HOH . E 4 HOH B 98 498 84 HOH HOH . E 4 HOH B 99 499 257 HOH HOH . E 4 HOH B 100 500 248 HOH HOH . E 4 HOH B 101 501 143 HOH HOH . E 4 HOH B 102 502 138 HOH HOH . E 4 HOH B 103 503 187 HOH HOH . E 4 HOH B 104 504 182 HOH HOH . E 4 HOH B 105 505 141 HOH HOH . E 4 HOH B 106 506 91 HOH HOH . E 4 HOH B 107 507 158 HOH HOH . E 4 HOH B 108 508 247 HOH HOH . E 4 HOH B 109 509 150 HOH HOH . E 4 HOH B 110 510 224 HOH HOH . E 4 HOH B 111 511 117 HOH HOH . E 4 HOH B 112 512 220 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 R8Y . . . C 3 41.86 26.196 25.798 0.8 20 ? C4 R8Y 2501 A 1 HETATM 2 C C5 R8Y . . . C 3 41.991 29.766 23.66 0.8 20 ? C5 R8Y 2501 A 1 HETATM 3 C C6 R8Y . . . C 3 41.627 29.457 22.264 0.8 20 ? C6 R8Y 2501 A 1 HETATM 4 C C7 R8Y . . . C 3 41.596 28.511 21.594 0.8 20 ? C7 R8Y 2501 A 1 HETATM 5 C C8 R8Y . . . C 3 41.195 28.652 20.469 0.8 20 ? C8 R8Y 2501 A 1 HETATM 6 C C9 R8Y . . . C 3 40.878 29.873 20.218 0.8 20 ? C9 R8Y 2501 A 1 HETATM 7 O O2 R8Y . . . C 3 41.709 30.873 24.082 0.8 20 ? O2 R8Y 2501 A 1 HETATM 8 N N R8Y . . . C 3 42.428 28.804 24.454 0.8 20 ? N R8Y 2501 A 1 HETATM 9 C C2 R8Y . . . C 3 42.208 27.406 24.106 0.8 20 ? C2 R8Y 2501 A 1 HETATM 10 C C3 R8Y . . . C 3 43.046 26.481 24.937 0.8 20 ? C3 R8Y 2501 A 1 HETATM 11 O O1 R8Y . . . C 3 41.759 26.681 26.861 0.8 20 -1 O1 R8Y 2501 A 1 HETATM 12 O O R8Y . . . C 3 41.06 25.43 25.409 0.8 20 ? O R8Y 2501 A 1 HETATM 13 C C1 R8Y . . . C 3 42.44 29.093 25.889 0.8 20 ? C1 R8Y 2501 A 1 HETATM 14 C C R8Y . . . C 3 43.722 28.725 26.554 0.8 20 ? C R8Y 2501 A 1 HETATM 15 S S R8Y . . . C 3 41.099 30.713 21.406 0.8 20 ? S R8Y 2501 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 15 #