data_5R0F # _model_server_result.job_id RZgVKd1ZskIQ4AnlflH1Vw _model_server_result.datetime_utc '2024-11-14 23:18:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5r0f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":2501}' # _entry.id 5R0F # _exptl.entry_id 5R0F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 205.253 _entity.id 3 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description (3-methoxyphenyl)(pyrrolidin-1-yl)methanone _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.25 _cell.angle_gamma 90 _cell.entry_id 5R0F _cell.length_a 89.59 _cell.length_b 82.24 _cell.length_c 91.639 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5R0F _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C12 H15 N O2' _chem_comp.formula_weight 205.253 _chem_comp.id R9G _chem_comp.mon_nstd_flag . _chem_comp.name (3-methoxyphenyl)(pyrrolidin-1-yl)methanone _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C3 R9G doub 277 n y C2 C1 R9G sing 278 n y O C1 R9G sing 279 n n O C R9G sing 280 n n C3 C4 R9G sing 281 n y C1 C6 R9G doub 282 n y C4 C5 R9G doub 283 n y C6 C5 R9G sing 284 n y C5 C7 R9G sing 285 n n C11 C10 R9G sing 286 n n C11 N R9G sing 287 n n C10 C9 R9G sing 288 n n C7 N R9G sing 289 n n C7 O1 R9G doub 290 n n N C8 R9G sing 291 n n C9 C8 R9G sing 292 n n C4 H1 R9G sing 293 n n C6 H2 R9G sing 294 n n C8 H3 R9G sing 295 n n C8 H4 R9G sing 296 n n C9 H5 R9G sing 297 n n C9 H6 R9G sing 298 n n C10 H7 R9G sing 299 n n C10 H8 R9G sing 300 n n C11 H9 R9G sing 301 n n C11 H10 R9G sing 302 n n C3 H11 R9G sing 303 n n C2 H12 R9G sing 304 n n C H13 R9G sing 305 n n C H14 R9G sing 306 n n C H15 R9G sing 307 n n # _atom_sites.entry_id 5R0F _atom_sites.fract_transf_matrix[1][1] 0.011162 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003681 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01216 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01149 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 R9G A 1 2501 2501 R9G XXX . D 4 HOH A 1 2601 26 HOH HOH . D 4 HOH A 2 2602 21 HOH HOH . D 4 HOH A 3 2603 28 HOH HOH . D 4 HOH A 4 2604 7 HOH HOH . D 4 HOH A 5 2605 54 HOH HOH . D 4 HOH A 6 2606 57 HOH HOH . D 4 HOH A 7 2607 60 HOH HOH . D 4 HOH A 8 2608 32 HOH HOH . D 4 HOH A 9 2609 30 HOH HOH . D 4 HOH A 10 2610 14 HOH HOH . D 4 HOH A 11 2611 29 HOH HOH . D 4 HOH A 12 2612 16 HOH HOH . D 4 HOH A 13 2613 9 HOH HOH . D 4 HOH A 14 2614 2 HOH HOH . D 4 HOH A 15 2615 67 HOH HOH . D 4 HOH A 16 2616 31 HOH HOH . D 4 HOH A 17 2617 10 HOH HOH . D 4 HOH A 18 2618 3 HOH HOH . D 4 HOH A 19 2619 13 HOH HOH . D 4 HOH A 20 2620 18 HOH HOH . D 4 HOH A 21 2621 19 HOH HOH . D 4 HOH A 22 2622 46 HOH HOH . D 4 HOH A 23 2623 63 HOH HOH . D 4 HOH A 24 2624 49 HOH HOH . D 4 HOH A 25 2625 65 HOH HOH . D 4 HOH A 26 2626 44 HOH HOH . D 4 HOH A 27 2627 35 HOH HOH . D 4 HOH A 28 2628 62 HOH HOH . D 4 HOH A 29 2629 38 HOH HOH . D 4 HOH A 30 2630 52 HOH HOH . D 4 HOH A 31 2631 5 HOH HOH . D 4 HOH A 32 2632 45 HOH HOH . D 4 HOH A 33 2633 59 HOH HOH . D 4 HOH A 34 2634 37 HOH HOH . D 4 HOH A 35 2635 61 HOH HOH . D 4 HOH A 36 2636 56 HOH HOH . D 4 HOH A 37 2637 34 HOH HOH . D 4 HOH A 38 2638 8 HOH HOH . D 4 HOH A 39 2639 64 HOH HOH . D 4 HOH A 40 2640 22 HOH HOH . D 4 HOH A 41 2641 58 HOH HOH . D 4 HOH A 42 2642 53 HOH HOH . D 4 HOH A 43 2643 20 HOH HOH . D 4 HOH A 44 2644 51 HOH HOH . D 4 HOH A 45 2645 36 HOH HOH . E 4 HOH B 1 401 66 HOH HOH . E 4 HOH B 2 402 25 HOH HOH . E 4 HOH B 3 403 4 HOH HOH . E 4 HOH B 4 404 6 HOH HOH . E 4 HOH B 5 405 50 HOH HOH . E 4 HOH B 6 406 33 HOH HOH . E 4 HOH B 7 407 41 HOH HOH . E 4 HOH B 8 408 43 HOH HOH . E 4 HOH B 9 409 47 HOH HOH . E 4 HOH B 10 410 42 HOH HOH . E 4 HOH B 11 411 24 HOH HOH . E 4 HOH B 12 412 40 HOH HOH . E 4 HOH B 13 413 39 HOH HOH . E 4 HOH B 14 414 12 HOH HOH . E 4 HOH B 15 415 17 HOH HOH . E 4 HOH B 16 416 23 HOH HOH . E 4 HOH B 17 417 48 HOH HOH . E 4 HOH B 18 418 15 HOH HOH . E 4 HOH B 19 419 27 HOH HOH . E 4 HOH B 20 420 11 HOH HOH . E 4 HOH B 21 421 55 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 R9G . . . C 3 29.801 18.593 41.655 0.94 20 ? C4 R9G 2501 A 1 HETATM 2 C C5 R9G . . . C 3 30.776 17.683 41.352 0.94 20 ? C5 R9G 2501 A 1 HETATM 3 C C6 R9G . . . C 3 30.593 16.864 40.256 0.94 20 ? C6 R9G 2501 A 1 HETATM 4 C C7 R9G . . . C 3 32.086 17.723 42.071 0.94 20 ? C7 R9G 2501 A 1 HETATM 5 C C8 R9G . . . C 3 33.869 16.405 43.04 0.94 20 ? C8 R9G 2501 A 1 HETATM 6 C C9 R9G . . . C 3 33.865 14.966 43.494 0.94 20 ? C9 R9G 2501 A 1 HETATM 7 C C10 R9G . . . C 3 32.703 14.55 43.509 0.94 20 ? C10 R9G 2501 A 1 HETATM 8 C C11 R9G . . . C 3 31.917 15.362 42.56 0.94 20 ? C11 R9G 2501 A 1 HETATM 9 O O1 R9G . . . C 3 32.675 18.72 42.164 0.94 20 ? O1 R9G 2501 A 1 HETATM 10 N N R9G . . . C 3 32.573 16.584 42.561 0.94 20 ? N R9G 2501 A 1 HETATM 11 C C3 R9G . . . C 3 28.708 18.728 40.846 0.94 20 ? C3 R9G 2501 A 1 HETATM 12 C C2 R9G . . . C 3 28.544 17.948 39.74 0.94 20 ? C2 R9G 2501 A 1 HETATM 13 C C1 R9G . . . C 3 29.486 17.042 39.446 0.94 20 ? C1 R9G 2501 A 1 HETATM 14 O O R9G . . . C 3 29.165 16.467 38.289 0.94 20 ? O R9G 2501 A 1 HETATM 15 C C R9G . . . C 3 30.03 15.531 37.839 0.94 20 ? C R9G 2501 A 1 # _model_server_stats.io_time_ms 28 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 15 #