data_5R0I
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_model_server_result.job_id            G6aWx-5MN0dY9DiE1XiS7w 
_model_server_result.datetime_utc      '2024-12-26 11:17:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5r0i 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":2501}' 
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_entry.id    5R0I 
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_exptl.entry_id    5R0I 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              164.161 
_entity.id                          3 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            6-azanyl-3-methyl-1,3-benzoxazol-2-one 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
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_cell.angle_alpha         90 
_cell.angle_beta          108.04 
_cell.angle_gamma         90 
_cell.entry_id            5R0I 
_cell.length_a            88.684 
_cell.length_b            82.462 
_cell.length_c            93.139 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 5R0I 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
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_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
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_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
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_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
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_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
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_chem_comp.formula           'C8 H8 N2 O2' 
_chem_comp.formula_weight    164.161 
_chem_comp.id                SYV 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              6-azanyl-3-methyl-1,3-benzoxazol-2-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
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loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C4 SYV sing 290 n n 
C4 C3 SYV doub 291 n y 
C4 C5 SYV sing 292 n y 
C3 C2 SYV sing 293 n y 
C5 C6 SYV doub 294 n y 
C2 C1 SYV doub 295 n y 
C6 C1 SYV sing 296 n y 
C6 O SYV sing 297 n n 
C1 N SYV sing 298 n n 
O C7 SYV sing 299 n n 
N C7 SYV sing 300 n n 
N C SYV sing 301 n n 
C7 O1 SYV doub 302 n n 
C5 H1 SYV sing 303 n n 
N1 H2 SYV sing 304 n n 
N1 H3 SYV sing 305 n n 
C H4 SYV sing 306 n n 
C H5 SYV sing 307 n n 
C H6 SYV sing 308 n n 
C3 H7 SYV sing 309 n n 
C2 H8 SYV sing 310 n n 
#
_atom_sites.entry_id                     5R0I 
_atom_sites.fract_transf_matrix[1][1]    0.011276 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003672 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012127 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011292 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 SYV A 1 2501 2501 SYV XXX . 
D 4 HOH A 1 2601 74 HOH HOH . 
D 4 HOH A 2 2602 5 HOH HOH . 
D 4 HOH A 3 2603 45 HOH HOH . 
D 4 HOH A 4 2604 55 HOH HOH . 
D 4 HOH A 5 2605 43 HOH HOH . 
D 4 HOH A 6 2606 84 HOH HOH . 
D 4 HOH A 7 2607 90 HOH HOH . 
D 4 HOH A 8 2608 21 HOH HOH . 
D 4 HOH A 9 2609 87 HOH HOH . 
D 4 HOH A 10 2610 11 HOH HOH . 
D 4 HOH A 11 2611 58 HOH HOH . 
D 4 HOH A 12 2612 28 HOH HOH . 
D 4 HOH A 13 2613 6 HOH HOH . 
D 4 HOH A 14 2614 37 HOH HOH . 
D 4 HOH A 15 2615 19 HOH HOH . 
D 4 HOH A 16 2616 12 HOH HOH . 
D 4 HOH A 17 2617 27 HOH HOH . 
D 4 HOH A 18 2618 2 HOH HOH . 
D 4 HOH A 19 2619 8 HOH HOH . 
D 4 HOH A 20 2620 14 HOH HOH . 
D 4 HOH A 21 2621 18 HOH HOH . 
D 4 HOH A 22 2622 80 HOH HOH . 
D 4 HOH A 23 2623 13 HOH HOH . 
D 4 HOH A 24 2624 73 HOH HOH . 
D 4 HOH A 25 2625 59 HOH HOH . 
D 4 HOH A 26 2626 41 HOH HOH . 
D 4 HOH A 27 2627 89 HOH HOH . 
D 4 HOH A 28 2628 75 HOH HOH . 
D 4 HOH A 29 2629 15 HOH HOH . 
D 4 HOH A 30 2630 29 HOH HOH . 
D 4 HOH A 31 2631 33 HOH HOH . 
D 4 HOH A 32 2632 20 HOH HOH . 
D 4 HOH A 33 2633 48 HOH HOH . 
D 4 HOH A 34 2634 82 HOH HOH . 
D 4 HOH A 35 2635 81 HOH HOH . 
D 4 HOH A 36 2636 7 HOH HOH . 
D 4 HOH A 37 2637 23 HOH HOH . 
D 4 HOH A 38 2638 10 HOH HOH . 
D 4 HOH A 39 2639 56 HOH HOH . 
D 4 HOH A 40 2640 66 HOH HOH . 
D 4 HOH A 41 2641 69 HOH HOH . 
D 4 HOH A 42 2642 35 HOH HOH . 
D 4 HOH A 43 2643 63 HOH HOH . 
D 4 HOH A 44 2644 67 HOH HOH . 
D 4 HOH A 45 2645 42 HOH HOH . 
D 4 HOH A 46 2646 86 HOH HOH . 
D 4 HOH A 47 2647 32 HOH HOH . 
D 4 HOH A 48 2648 57 HOH HOH . 
D 4 HOH A 49 2649 76 HOH HOH . 
D 4 HOH A 50 2650 47 HOH HOH . 
D 4 HOH A 51 2651 24 HOH HOH . 
D 4 HOH A 52 2652 79 HOH HOH . 
D 4 HOH A 53 2653 40 HOH HOH . 
D 4 HOH A 54 2654 72 HOH HOH . 
D 4 HOH A 55 2655 68 HOH HOH . 
D 4 HOH A 56 2656 71 HOH HOH . 
E 4 HOH B 1 401 85 HOH HOH . 
E 4 HOH B 2 402 83 HOH HOH . 
E 4 HOH B 3 403 30 HOH HOH . 
E 4 HOH B 4 404 25 HOH HOH . 
E 4 HOH B 5 405 17 HOH HOH . 
E 4 HOH B 6 406 62 HOH HOH . 
E 4 HOH B 7 407 70 HOH HOH . 
E 4 HOH B 8 408 9 HOH HOH . 
E 4 HOH B 9 409 53 HOH HOH . 
E 4 HOH B 10 410 49 HOH HOH . 
E 4 HOH B 11 411 22 HOH HOH . 
E 4 HOH B 12 412 26 HOH HOH . 
E 4 HOH B 13 413 54 HOH HOH . 
E 4 HOH B 14 414 34 HOH HOH . 
E 4 HOH B 15 415 88 HOH HOH . 
E 4 HOH B 16 416 65 HOH HOH . 
E 4 HOH B 17 417 4 HOH HOH . 
E 4 HOH B 18 418 36 HOH HOH . 
E 4 HOH B 19 419 78 HOH HOH . 
E 4 HOH B 20 420 50 HOH HOH . 
E 4 HOH B 21 421 39 HOH HOH . 
E 4 HOH B 22 422 60 HOH HOH . 
E 4 HOH B 23 423 64 HOH HOH . 
E 4 HOH B 24 424 31 HOH HOH . 
E 4 HOH B 25 425 46 HOH HOH . 
E 4 HOH B 26 426 38 HOH HOH . 
E 4 HOH B 27 427 3 HOH HOH . 
E 4 HOH B 28 428 52 HOH HOH . 
E 4 HOH B 29 429 51 HOH HOH . 
E 4 HOH B 30 430 77 HOH HOH . 
E 4 HOH B 31 431 61 HOH HOH . 
E 4 HOH B 32 432 44 HOH HOH . 
E 4 HOH B 33 433 16 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 SYV . . . C 3 28.556 16.133 37.858 0.52 20 ? C4 SYV 2501 A 1 
HETATM 2 C C5 SYV . . . C 3 29.713 16.722 38.365 0.52 20 ? C5 SYV 2501 A 1 
HETATM 3 C C6 SYV . . . C 3 29.579 17.685 39.323 0.52 20 ? C6 SYV 2501 A 1 
HETATM 4 N N1 SYV . . . C 3 28.629 15.27 36.789 0.52 20 ? N1 SYV 2501 A 1 
HETATM 5 C C7 SYV . . . C 3 29.92 19.338 40.725 0.52 20 ? C7 SYV 2501 A 1 
HETATM 6 O O1 SYV . . . C 3 30.512 20.194 41.292 0.52 20 ? O1 SYV 2501 A 1 
HETATM 7 N N SYV . . . C 3 28.585 19.132 40.619 0.52 20 ? N SYV 2501 A 1 
HETATM 8 C C SYV . . . C 3 27.514 19.836 41.29 0.52 20 ? C SYV 2501 A 1 
HETATM 9 O O SYV . . . C 3 30.548 18.421 39.928 0.52 20 ? O SYV 2501 A 1 
HETATM 10 C C1 SYV . . . C 3 28.35 18.108 39.751 0.52 20 ? C1 SYV 2501 A 1 
HETATM 11 C C3 SYV . . . C 3 27.312 16.526 38.356 0.52 20 ? C3 SYV 2501 A 1 
HETATM 12 C C2 SYV . . . C 3 27.203 17.531 39.282 0.52 20 ? C2 SYV 2501 A 1 
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_model_server_stats.io_time_ms              53 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           301 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           12 
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