data_5R0M # _model_server_result.job_id rKjgGnTdAtSPrgVRwA_ncA _model_server_result.datetime_utc '2025-06-21 22:35:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5r0m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 5R0M # _exptl.entry_id 5R0M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 232.301 _entity.id 3 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description ~{N}-(2-thiophen-2-ylethyl)pyridine-4-carboxamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.42 _cell.angle_gamma 90 _cell.entry_id 5R0M _cell.length_a 88.375 _cell.length_b 81.975 _cell.length_c 93.135 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5R0M _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C12 H12 N2 O S' _chem_comp.formula_weight 232.301 _chem_comp.id SZA _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}-(2-thiophen-2-ylethyl)pyridine-4-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C10 SZA doub 290 n y N1 C9 SZA sing 291 n y C10 C11 SZA sing 292 n y C9 C8 SZA doub 293 n y C11 C7 SZA doub 294 n y C8 C7 SZA sing 295 n y C7 C6 SZA sing 296 n n C6 O SZA doub 297 n n C6 N SZA sing 298 n n N C5 SZA sing 299 n n C5 C4 SZA sing 300 n n C4 C2 SZA sing 301 n n C2 C1 SZA doub 302 n y C2 S SZA sing 303 n y C1 C SZA sing 304 n y C C3 SZA doub 305 n y S C3 SZA sing 306 n y C4 H1 SZA sing 307 n n C4 H2 SZA sing 308 n n C5 H3 SZA sing 309 n n C5 H4 SZA sing 310 n n C8 H5 SZA sing 311 n n C9 H6 SZA sing 312 n n C10 H7 SZA sing 313 n n C11 H8 SZA sing 314 n n N H9 SZA sing 315 n n C1 H10 SZA sing 316 n n C3 H11 SZA sing 317 n n C H12 SZA sing 318 n n # _atom_sites.entry_id 5R0M _atom_sites.fract_transf_matrix[1][1] 0.011315 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003768 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012199 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011317 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SZA A 1 2501 2501 SZA XXX . D 3 SZA B 1 401 401 SZA XXX . E 4 HOH A 1 2601 97 HOH HOH . E 4 HOH A 2 2602 6 HOH HOH . E 4 HOH A 3 2603 47 HOH HOH . E 4 HOH A 4 2604 81 HOH HOH . E 4 HOH A 5 2605 64 HOH HOH . E 4 HOH A 6 2606 92 HOH HOH . E 4 HOH A 7 2607 17 HOH HOH . E 4 HOH A 8 2608 29 HOH HOH . E 4 HOH A 9 2609 32 HOH HOH . E 4 HOH A 10 2610 48 HOH HOH . E 4 HOH A 11 2611 7 HOH HOH . E 4 HOH A 12 2612 53 HOH HOH . E 4 HOH A 13 2613 37 HOH HOH . E 4 HOH A 14 2614 14 HOH HOH . E 4 HOH A 15 2615 23 HOH HOH . E 4 HOH A 16 2616 39 HOH HOH . E 4 HOH A 17 2617 63 HOH HOH . E 4 HOH A 18 2618 36 HOH HOH . E 4 HOH A 19 2619 18 HOH HOH . E 4 HOH A 20 2620 12 HOH HOH . E 4 HOH A 21 2621 2 HOH HOH . E 4 HOH A 22 2622 13 HOH HOH . E 4 HOH A 23 2623 4 HOH HOH . E 4 HOH A 24 2624 50 HOH HOH . E 4 HOH A 25 2625 8 HOH HOH . E 4 HOH A 26 2626 83 HOH HOH . E 4 HOH A 27 2627 82 HOH HOH . E 4 HOH A 28 2628 77 HOH HOH . E 4 HOH A 29 2629 15 HOH HOH . E 4 HOH A 30 2630 55 HOH HOH . E 4 HOH A 31 2631 67 HOH HOH . E 4 HOH A 32 2632 79 HOH HOH . E 4 HOH A 33 2633 45 HOH HOH . E 4 HOH A 34 2634 35 HOH HOH . E 4 HOH A 35 2635 75 HOH HOH . E 4 HOH A 36 2636 93 HOH HOH . E 4 HOH A 37 2637 33 HOH HOH . E 4 HOH A 38 2638 24 HOH HOH . E 4 HOH A 39 2639 26 HOH HOH . E 4 HOH A 40 2640 54 HOH HOH . E 4 HOH A 41 2641 31 HOH HOH . E 4 HOH A 42 2642 52 HOH HOH . E 4 HOH A 43 2643 22 HOH HOH . E 4 HOH A 44 2644 41 HOH HOH . E 4 HOH A 45 2645 98 HOH HOH . E 4 HOH A 46 2646 62 HOH HOH . E 4 HOH A 47 2647 69 HOH HOH . E 4 HOH A 48 2648 42 HOH HOH . E 4 HOH A 49 2649 40 HOH HOH . E 4 HOH A 50 2650 68 HOH HOH . E 4 HOH A 51 2651 96 HOH HOH . E 4 HOH A 52 2652 80 HOH HOH . E 4 HOH A 53 2653 95 HOH HOH . E 4 HOH A 54 2654 88 HOH HOH . E 4 HOH A 55 2655 57 HOH HOH . F 4 HOH B 1 501 90 HOH HOH . F 4 HOH B 2 502 91 HOH HOH . F 4 HOH B 3 503 9 HOH HOH . F 4 HOH B 4 504 58 HOH HOH . F 4 HOH B 5 505 89 HOH HOH . F 4 HOH B 6 506 94 HOH HOH . F 4 HOH B 7 507 20 HOH HOH . F 4 HOH B 8 508 46 HOH HOH . F 4 HOH B 9 509 56 HOH HOH . F 4 HOH B 10 510 25 HOH HOH . F 4 HOH B 11 511 19 HOH HOH . F 4 HOH B 12 512 44 HOH HOH . F 4 HOH B 13 513 72 HOH HOH . F 4 HOH B 14 514 21 HOH HOH . F 4 HOH B 15 515 10 HOH HOH . F 4 HOH B 16 516 28 HOH HOH . F 4 HOH B 17 517 85 HOH HOH . F 4 HOH B 18 518 73 HOH HOH . F 4 HOH B 19 519 86 HOH HOH . F 4 HOH B 20 520 3 HOH HOH . F 4 HOH B 21 521 11 HOH HOH . F 4 HOH B 22 522 74 HOH HOH . F 4 HOH B 23 523 76 HOH HOH . F 4 HOH B 24 524 30 HOH HOH . F 4 HOH B 25 525 43 HOH HOH . F 4 HOH B 26 526 70 HOH HOH . F 4 HOH B 27 527 71 HOH HOH . F 4 HOH B 28 528 59 HOH HOH . F 4 HOH B 29 529 84 HOH HOH . F 4 HOH B 30 530 34 HOH HOH . F 4 HOH B 31 531 87 HOH HOH . F 4 HOH B 32 532 38 HOH HOH . F 4 HOH B 33 533 61 HOH HOH . F 4 HOH B 34 534 51 HOH HOH . F 4 HOH B 35 535 5 HOH HOH . F 4 HOH B 36 536 66 HOH HOH . F 4 HOH B 37 537 16 HOH HOH . F 4 HOH B 38 538 65 HOH HOH . F 4 HOH B 39 539 60 HOH HOH . F 4 HOH B 40 540 27 HOH HOH . F 4 HOH B 41 541 49 HOH HOH . F 4 HOH B 42 542 78 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 SZA . . . D 3 15.597 11.814 -41.793 0.66 20 ? C4 SZA 401 B 1 HETATM 2 C C5 SZA . . . D 3 14.577 12.122 -42.87 0.66 20 ? C5 SZA 401 B 1 HETATM 3 C C6 SZA . . . D 3 15.482 12.133 -45.149 0.66 20 ? C6 SZA 401 B 1 HETATM 4 N N1 SZA . . . D 3 12.924 13.683 -48.167 0.66 20 ? N1 SZA 401 B 1 HETATM 5 C C7 SZA . . . D 3 14.656 12.438 -46.348 0.66 20 ? C7 SZA 401 B 1 HETATM 6 C C8 SZA . . . D 3 13.355 12.001 -46.499 0.66 20 ? C8 SZA 401 B 1 HETATM 7 C C9 SZA . . . D 3 12.53 12.662 -47.398 0.66 20 ? C9 SZA 401 B 1 HETATM 8 C C10 SZA . . . D 3 14.199 14.042 -48.062 0.66 20 ? C10 SZA 401 B 1 HETATM 9 C C11 SZA . . . D 3 15.096 13.46 -47.176 0.66 20 ? C11 SZA 401 B 1 HETATM 10 O O SZA . . . D 3 16.579 12.634 -45.04 0.66 20 ? O SZA 401 B 1 HETATM 11 N N SZA . . . D 3 14.901 11.468 -44.14 0.66 20 ? N SZA 401 B 1 HETATM 12 C C2 SZA . . . D 3 16.562 12.763 -41.021 0.66 20 ? C2 SZA 401 B 1 HETATM 13 C C1 SZA . . . D 3 17.94 12.659 -40.897 0.66 20 ? C1 SZA 401 B 1 HETATM 14 S S SZA . . . D 3 16.045 14.024 -39.955 0.66 20 ? S SZA 401 B 1 HETATM 15 C C3 SZA . . . D 3 17.569 14.313 -39.408 0.66 20 ? C3 SZA 401 B 1 HETATM 16 C C SZA . . . D 3 18.497 13.54 -39.975 0.66 20 ? C SZA 401 B 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 345 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 16 #