data_5R1W # _model_server_result.job_id tDi5ynKc9B4QjCUCGvKqmg _model_server_result.datetime_utc '2025-02-17 01:53:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5r1w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 5R1W # _exptl.entry_id 5R1W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 227.28 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-ethyl-N-(thiophene-2-carbonyl)-beta-alanine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.06 _cell.angle_gamma 90 _cell.entry_id 5R1W _cell.length_a 45.076 _cell.length_b 73.584 _cell.length_c 52.444 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5R1W _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 344 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 255 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 379 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 290 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.083 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C10 H13 N O3 S' _chem_comp.formula_weight 227.28 _chem_comp.id R8Y _chem_comp.mon_nstd_flag . _chem_comp.name N-ethyl-N-(thiophene-2-carbonyl)-beta-alanine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O C4 R8Y doub 277 n n C C1 R8Y sing 278 n n C1 N R8Y sing 279 n n C4 C3 R8Y sing 280 n n C4 O1 R8Y sing 281 n n C3 C2 R8Y sing 282 n n C2 N R8Y sing 283 n n N C5 R8Y sing 284 n n O2 C5 R8Y doub 285 n n C5 C6 R8Y sing 286 n n C6 S R8Y sing 287 n y C6 C7 R8Y doub 288 n y S C9 R8Y sing 289 n y C7 C8 R8Y sing 290 n y C9 C8 R8Y doub 291 n y C7 H1 R8Y sing 292 n n C8 H2 R8Y sing 293 n n C9 H3 R8Y sing 294 n n C2 H4 R8Y sing 295 n n C2 H5 R8Y sing 296 n n C3 H6 R8Y sing 297 n n C3 H7 R8Y sing 298 n n O1 H8 R8Y sing 299 n n C1 H9 R8Y sing 300 n n C1 H10 R8Y sing 301 n n C H11 R8Y sing 302 n n C H12 R8Y sing 303 n n C H13 R8Y sing 304 n n # _atom_sites.entry_id 5R1W _atom_sites.fract_transf_matrix[1][1] 0.022185 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007666 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01359 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020174 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 R8Y A 1 401 401 R8Y XXX . C 3 HOH A 1 501 247 HOH HOH . C 3 HOH A 2 502 192 HOH HOH . C 3 HOH A 3 503 217 HOH HOH . C 3 HOH A 4 504 53 HOH HOH . C 3 HOH A 5 505 243 HOH HOH . C 3 HOH A 6 506 49 HOH HOH . C 3 HOH A 7 507 167 HOH HOH . C 3 HOH A 8 508 31 HOH HOH . C 3 HOH A 9 509 120 HOH HOH . C 3 HOH A 10 510 251 HOH HOH . C 3 HOH A 11 511 18 HOH HOH . C 3 HOH A 12 512 165 HOH HOH . C 3 HOH A 13 513 86 HOH HOH . C 3 HOH A 14 514 77 HOH HOH . C 3 HOH A 15 515 96 HOH HOH . C 3 HOH A 16 516 93 HOH HOH . C 3 HOH A 17 517 194 HOH HOH . C 3 HOH A 18 518 204 HOH HOH . C 3 HOH A 19 519 22 HOH HOH . C 3 HOH A 20 520 62 HOH HOH . C 3 HOH A 21 521 235 HOH HOH . C 3 HOH A 22 522 245 HOH HOH . C 3 HOH A 23 523 141 HOH HOH . C 3 HOH A 24 524 207 HOH HOH . C 3 HOH A 25 525 211 HOH HOH . C 3 HOH A 26 526 231 HOH HOH . C 3 HOH A 27 527 6 HOH HOH . C 3 HOH A 28 528 244 HOH HOH . C 3 HOH A 29 529 184 HOH HOH . C 3 HOH A 30 530 56 HOH HOH . C 3 HOH A 31 531 41 HOH HOH . C 3 HOH A 32 532 35 HOH HOH . C 3 HOH A 33 533 249 HOH HOH . C 3 HOH A 34 534 99 HOH HOH . C 3 HOH A 35 535 236 HOH HOH . C 3 HOH A 36 536 34 HOH HOH . C 3 HOH A 37 537 54 HOH HOH . C 3 HOH A 38 538 124 HOH HOH . C 3 HOH A 39 539 263 HOH HOH . C 3 HOH A 40 540 23 HOH HOH . C 3 HOH A 41 541 28 HOH HOH . C 3 HOH A 42 542 46 HOH HOH . C 3 HOH A 43 543 113 HOH HOH . C 3 HOH A 44 544 12 HOH HOH . C 3 HOH A 45 545 15 HOH HOH . C 3 HOH A 46 546 216 HOH HOH . C 3 HOH A 47 547 45 HOH HOH . C 3 HOH A 48 548 58 HOH HOH . C 3 HOH A 49 549 179 HOH HOH . C 3 HOH A 50 550 182 HOH HOH . C 3 HOH A 51 551 129 HOH HOH . C 3 HOH A 52 552 259 HOH HOH . C 3 HOH A 53 553 61 HOH HOH . C 3 HOH A 54 554 2 HOH HOH . C 3 HOH A 55 555 38 HOH HOH . C 3 HOH A 56 556 252 HOH HOH . C 3 HOH A 57 557 115 HOH HOH . C 3 HOH A 58 558 29 HOH HOH . C 3 HOH A 59 559 108 HOH HOH . C 3 HOH A 60 560 71 HOH HOH . C 3 HOH A 61 561 16 HOH HOH . C 3 HOH A 62 562 32 HOH HOH . C 3 HOH A 63 563 206 HOH HOH . C 3 HOH A 64 564 98 HOH HOH . C 3 HOH A 65 565 143 HOH HOH . C 3 HOH A 66 566 128 HOH HOH . C 3 HOH A 67 567 163 HOH HOH . C 3 HOH A 68 568 104 HOH HOH . C 3 HOH A 69 569 193 HOH HOH . C 3 HOH A 70 570 101 HOH HOH . C 3 HOH A 71 571 114 HOH HOH . C 3 HOH A 72 572 82 HOH HOH . C 3 HOH A 73 573 50 HOH HOH . C 3 HOH A 74 574 20 HOH HOH . C 3 HOH A 75 575 134 HOH HOH . C 3 HOH A 76 576 219 HOH HOH . C 3 HOH A 77 577 26 HOH HOH . C 3 HOH A 78 578 227 HOH HOH . C 3 HOH A 79 579 24 HOH HOH . C 3 HOH A 80 580 174 HOH HOH . C 3 HOH A 81 581 156 HOH HOH . C 3 HOH A 82 582 13 HOH HOH . C 3 HOH A 83 583 10 HOH HOH . C 3 HOH A 84 584 27 HOH HOH . C 3 HOH A 85 585 85 HOH HOH . C 3 HOH A 86 586 81 HOH HOH . C 3 HOH A 87 587 9 HOH HOH . C 3 HOH A 88 588 195 HOH HOH . C 3 HOH A 89 589 119 HOH HOH . C 3 HOH A 90 590 266 HOH HOH . C 3 HOH A 91 591 4 HOH HOH . C 3 HOH A 92 592 100 HOH HOH . C 3 HOH A 93 593 11 HOH HOH . C 3 HOH A 94 594 164 HOH HOH . C 3 HOH A 95 595 97 HOH HOH . C 3 HOH A 96 596 189 HOH HOH . C 3 HOH A 97 597 132 HOH HOH . C 3 HOH A 98 598 185 HOH HOH . C 3 HOH A 99 599 48 HOH HOH . C 3 HOH A 100 600 39 HOH HOH . C 3 HOH A 101 601 175 HOH HOH . C 3 HOH A 102 602 21 HOH HOH . C 3 HOH A 103 603 17 HOH HOH . C 3 HOH A 104 604 148 HOH HOH . C 3 HOH A 105 605 79 HOH HOH . C 3 HOH A 106 606 42 HOH HOH . C 3 HOH A 107 607 257 HOH HOH . C 3 HOH A 108 608 169 HOH HOH . C 3 HOH A 109 609 228 HOH HOH . C 3 HOH A 110 610 239 HOH HOH . C 3 HOH A 111 611 19 HOH HOH . C 3 HOH A 112 612 190 HOH HOH . C 3 HOH A 113 613 178 HOH HOH . C 3 HOH A 114 614 151 HOH HOH . C 3 HOH A 115 615 66 HOH HOH . C 3 HOH A 116 616 111 HOH HOH . C 3 HOH A 117 617 51 HOH HOH . C 3 HOH A 118 618 102 HOH HOH . C 3 HOH A 119 619 14 HOH HOH . C 3 HOH A 120 620 181 HOH HOH . C 3 HOH A 121 621 8 HOH HOH . C 3 HOH A 122 622 225 HOH HOH . C 3 HOH A 123 623 7 HOH HOH . C 3 HOH A 124 624 70 HOH HOH . C 3 HOH A 125 625 131 HOH HOH . C 3 HOH A 126 626 30 HOH HOH . C 3 HOH A 127 627 144 HOH HOH . C 3 HOH A 128 628 187 HOH HOH . C 3 HOH A 129 629 73 HOH HOH . C 3 HOH A 130 630 44 HOH HOH . C 3 HOH A 131 631 226 HOH HOH . C 3 HOH A 132 632 37 HOH HOH . C 3 HOH A 133 633 152 HOH HOH . C 3 HOH A 134 634 123 HOH HOH . C 3 HOH A 135 635 110 HOH HOH . C 3 HOH A 136 636 88 HOH HOH . C 3 HOH A 137 637 121 HOH HOH . C 3 HOH A 138 638 255 HOH HOH . C 3 HOH A 139 639 149 HOH HOH . C 3 HOH A 140 640 234 HOH HOH . C 3 HOH A 141 641 171 HOH HOH . C 3 HOH A 142 642 5 HOH HOH . C 3 HOH A 143 643 254 HOH HOH . C 3 HOH A 144 644 142 HOH HOH . C 3 HOH A 145 645 40 HOH HOH . C 3 HOH A 146 646 92 HOH HOH . C 3 HOH A 147 647 112 HOH HOH . C 3 HOH A 148 648 157 HOH HOH . C 3 HOH A 149 649 60 HOH HOH . C 3 HOH A 150 650 147 HOH HOH . C 3 HOH A 151 651 199 HOH HOH . C 3 HOH A 152 652 67 HOH HOH . C 3 HOH A 153 653 72 HOH HOH . C 3 HOH A 154 654 200 HOH HOH . C 3 HOH A 155 655 133 HOH HOH . C 3 HOH A 156 656 78 HOH HOH . C 3 HOH A 157 657 89 HOH HOH . C 3 HOH A 158 658 161 HOH HOH . C 3 HOH A 159 659 261 HOH HOH . C 3 HOH A 160 660 80 HOH HOH . C 3 HOH A 161 661 33 HOH HOH . C 3 HOH A 162 662 118 HOH HOH . C 3 HOH A 163 663 229 HOH HOH . C 3 HOH A 164 664 125 HOH HOH . C 3 HOH A 165 665 55 HOH HOH . C 3 HOH A 166 666 116 HOH HOH . C 3 HOH A 167 667 117 HOH HOH . C 3 HOH A 168 668 47 HOH HOH . C 3 HOH A 169 669 109 HOH HOH . C 3 HOH A 170 670 150 HOH HOH . C 3 HOH A 171 671 68 HOH HOH . C 3 HOH A 172 672 176 HOH HOH . C 3 HOH A 173 673 186 HOH HOH . C 3 HOH A 174 674 258 HOH HOH . C 3 HOH A 175 675 126 HOH HOH . C 3 HOH A 176 676 59 HOH HOH . C 3 HOH A 177 677 75 HOH HOH . C 3 HOH A 178 678 76 HOH HOH . C 3 HOH A 179 679 83 HOH HOH . C 3 HOH A 180 680 160 HOH HOH . C 3 HOH A 181 681 137 HOH HOH . C 3 HOH A 182 682 25 HOH HOH . C 3 HOH A 183 683 36 HOH HOH . C 3 HOH A 184 684 91 HOH HOH . C 3 HOH A 185 685 209 HOH HOH . C 3 HOH A 186 686 95 HOH HOH . C 3 HOH A 187 687 65 HOH HOH . C 3 HOH A 188 688 153 HOH HOH . C 3 HOH A 189 689 105 HOH HOH . C 3 HOH A 190 690 140 HOH HOH . C 3 HOH A 191 691 103 HOH HOH . C 3 HOH A 192 692 145 HOH HOH . C 3 HOH A 193 693 69 HOH HOH . C 3 HOH A 194 694 240 HOH HOH . C 3 HOH A 195 695 107 HOH HOH . C 3 HOH A 196 696 248 HOH HOH . C 3 HOH A 197 697 224 HOH HOH . C 3 HOH A 198 698 238 HOH HOH . C 3 HOH A 199 699 63 HOH HOH . C 3 HOH A 200 700 264 HOH HOH . C 3 HOH A 201 701 213 HOH HOH . C 3 HOH A 202 702 87 HOH HOH . C 3 HOH A 203 703 232 HOH HOH . C 3 HOH A 204 704 221 HOH HOH . C 3 HOH A 205 705 57 HOH HOH . C 3 HOH A 206 706 191 HOH HOH . C 3 HOH A 207 707 64 HOH HOH . C 3 HOH A 208 708 222 HOH HOH . C 3 HOH A 209 709 52 HOH HOH . C 3 HOH A 210 710 253 HOH HOH . C 3 HOH A 211 711 166 HOH HOH . C 3 HOH A 212 712 168 HOH HOH . C 3 HOH A 213 713 173 HOH HOH . C 3 HOH A 214 714 210 HOH HOH . C 3 HOH A 215 715 208 HOH HOH . C 3 HOH A 216 716 183 HOH HOH . C 3 HOH A 217 717 43 HOH HOH . C 3 HOH A 218 718 159 HOH HOH . C 3 HOH A 219 719 230 HOH HOH . C 3 HOH A 220 720 172 HOH HOH . C 3 HOH A 221 721 223 HOH HOH . C 3 HOH A 222 722 237 HOH HOH . C 3 HOH A 223 723 135 HOH HOH . C 3 HOH A 224 724 90 HOH HOH . C 3 HOH A 225 725 212 HOH HOH . C 3 HOH A 226 726 233 HOH HOH . C 3 HOH A 227 727 130 HOH HOH . C 3 HOH A 228 728 155 HOH HOH . C 3 HOH A 229 729 139 HOH HOH . C 3 HOH A 230 730 242 HOH HOH . C 3 HOH A 231 731 136 HOH HOH . C 3 HOH A 232 732 180 HOH HOH . C 3 HOH A 233 733 106 HOH HOH . C 3 HOH A 234 734 260 HOH HOH . C 3 HOH A 235 735 265 HOH HOH . C 3 HOH A 236 736 256 HOH HOH . C 3 HOH A 237 737 84 HOH HOH . C 3 HOH A 238 738 205 HOH HOH . C 3 HOH A 239 739 220 HOH HOH . C 3 HOH A 240 740 262 HOH HOH . C 3 HOH A 241 741 122 HOH HOH . C 3 HOH A 242 742 188 HOH HOH . C 3 HOH A 243 743 162 HOH HOH . C 3 HOH A 244 744 74 HOH HOH . C 3 HOH A 245 745 246 HOH HOH . C 3 HOH A 246 746 250 HOH HOH . C 3 HOH A 247 747 170 HOH HOH . C 3 HOH A 248 748 201 HOH HOH . C 3 HOH A 249 749 202 HOH HOH . C 3 HOH A 250 750 215 HOH HOH . C 3 HOH A 251 751 127 HOH HOH . C 3 HOH A 252 752 196 HOH HOH . C 3 HOH A 253 753 241 HOH HOH . C 3 HOH A 254 754 154 HOH HOH . C 3 HOH A 255 755 138 HOH HOH . C 3 HOH A 256 756 146 HOH HOH . C 3 HOH A 257 757 197 HOH HOH . C 3 HOH A 258 758 158 HOH HOH . C 3 HOH A 259 759 198 HOH HOH . C 3 HOH A 260 760 214 HOH HOH . C 3 HOH A 261 761 203 HOH HOH . C 3 HOH A 262 762 177 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 R8Y . . . B 2 50.953 5.488 42.665 0.48 20 ? C4 R8Y 401 A 1 HETATM 2 C C5 R8Y . . . B 2 51.588 9.632 44.969 0.48 20 ? C5 R8Y 401 A 1 HETATM 3 C C6 R8Y . . . B 2 51.278 9.031 46.28 0.48 20 ? C6 R8Y 401 A 1 HETATM 4 C C7 R8Y . . . B 2 50.999 7.843 46.612 0.48 20 ? C7 R8Y 401 A 1 HETATM 5 C C8 R8Y . . . B 2 50.734 7.684 47.963 0.48 20 ? C8 R8Y 401 A 1 HETATM 6 C C9 R8Y . . . B 2 50.852 8.821 48.636 0.48 20 ? C9 R8Y 401 A 1 HETATM 7 O O2 R8Y . . . B 2 51.55 10.846 44.94 0.48 20 ? O2 R8Y 401 A 1 HETATM 8 N N R8Y . . . B 2 51.885 8.92 43.881 0.48 20 ? N R8Y 401 A 1 HETATM 9 C C2 R8Y . . . B 2 51.941 7.461 43.746 0.48 20 ? C2 R8Y 401 A 1 HETATM 10 C C3 R8Y . . . B 2 50.689 6.908 43.096 0.48 20 ? C3 R8Y 401 A 1 HETATM 11 O O1 R8Y . . . B 2 50.72 4.579 43.482 0.48 20 ? O1 R8Y 401 A 1 HETATM 12 O O R8Y . . . B 2 51.358 5.306 41.551 0.48 20 -1 O R8Y 401 A 1 HETATM 13 C C1 R8Y . . . B 2 52.154 9.678 42.648 0.48 20 ? C1 R8Y 401 A 1 HETATM 14 C C R8Y . . . B 2 53.625 10.01 42.448 0.48 20 ? C R8Y 401 A 1 HETATM 15 S S R8Y . . . B 2 51.249 10.079 47.625 0.48 20 ? S R8Y 401 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 15 #