data_5R42
#
_model_server_result.job_id            f66Nc7DFuWH1VT-EGNsuOg 
_model_server_result.datetime_utc      '2024-10-20 20:39:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5r42 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":201}' 
#
_entry.id    5R42 
#
_exptl.entry_id    5R42 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              126.904 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'IODIDE ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5R42 
_cell.length_a            69.377 
_cell.length_b            69.377 
_cell.length_c            98.144 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5R42 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        94 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 42 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 1 A CYS 1 1_555 B SG CYS 107 B CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf2 B SG CYS 27 B CYS 42 1_555 B SG CYS 43 B CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf3 B SG CYS 121 B CYS 136 1_555 C SG CYS 53 C CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
disulf ? disulf4 C SG CYS 20 C CYS 168 1_555 C SG CYS 34 C CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
disulf ? disulf5 C SG CYS 43 C CYS 191 1_555 C SG CYS 72 C CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
covale ? covale1 C OG SER 47 C SER 195 1_555 D C TRP 4 D TRP 429 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.322 ? 
#
_chem_comp.formula           'I -1' 
_chem_comp.formula_weight    126.904 
_chem_comp.id                IOD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'IODIDE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5R42 
_atom_sites.fract_transf_matrix[1][1]    0.014414 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014414 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010189 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 6 IOD B 1 201 1 IOD IOD . 
G 7 HOH A 1 101 1120 HOH HOH . 
G 7 HOH A 2 102 1118 HOH HOH . 
G 7 HOH A 3 103 1042 HOH HOH . 
G 7 HOH A 4 104 1062 HOH HOH . 
G 7 HOH A 5 105 1090 HOH HOH . 
G 7 HOH A 6 106 1091 HOH HOH . 
G 7 HOH A 7 107 1066 HOH HOH . 
G 7 HOH A 8 108 1115 HOH HOH . 
G 7 HOH A 9 109 1107 HOH HOH . 
H 7 HOH B 1 301 1121 HOH HOH . 
H 7 HOH B 2 302 1104 HOH HOH . 
H 7 HOH B 3 303 1088 HOH HOH . 
H 7 HOH B 4 304 1026 HOH HOH . 
H 7 HOH B 5 305 1127 HOH HOH . 
H 7 HOH B 6 306 1076 HOH HOH . 
H 7 HOH B 7 307 1055 HOH HOH . 
H 7 HOH B 8 308 1046 HOH HOH . 
H 7 HOH B 9 309 1133 HOH HOH . 
H 7 HOH B 10 310 1017 HOH HOH . 
H 7 HOH B 11 311 1116 HOH HOH . 
H 7 HOH B 12 312 1142 HOH HOH . 
H 7 HOH B 13 313 1081 HOH HOH . 
H 7 HOH B 14 314 1048 HOH HOH . 
H 7 HOH B 15 315 1010 HOH HOH . 
H 7 HOH B 16 316 1125 HOH HOH . 
H 7 HOH B 17 317 1006 HOH HOH . 
H 7 HOH B 18 318 1057 HOH HOH . 
H 7 HOH B 19 319 1148 HOH HOH . 
H 7 HOH B 20 320 1163 HOH HOH . 
H 7 HOH B 21 321 1110 HOH HOH . 
H 7 HOH B 22 322 1069 HOH HOH . 
H 7 HOH B 23 323 1021 HOH HOH . 
H 7 HOH B 24 324 1156 HOH HOH . 
H 7 HOH B 25 325 1151 HOH HOH . 
H 7 HOH B 26 326 1051 HOH HOH . 
H 7 HOH B 27 327 1039 HOH HOH . 
H 7 HOH B 28 328 1024 HOH HOH . 
H 7 HOH B 29 329 1008 HOH HOH . 
H 7 HOH B 30 330 1043 HOH HOH . 
H 7 HOH B 31 331 1109 HOH HOH . 
H 7 HOH B 32 332 1014 HOH HOH . 
H 7 HOH B 33 333 1038 HOH HOH . 
H 7 HOH B 34 334 1167 HOH HOH . 
H 7 HOH B 35 335 1003 HOH HOH . 
H 7 HOH B 36 336 1078 HOH HOH . 
H 7 HOH B 37 337 1036 HOH HOH . 
H 7 HOH B 38 338 1152 HOH HOH . 
H 7 HOH B 39 339 1059 HOH HOH . 
H 7 HOH B 40 340 1089 HOH HOH . 
H 7 HOH B 41 341 1126 HOH HOH . 
H 7 HOH B 42 342 1072 HOH HOH . 
H 7 HOH B 43 343 1100 HOH HOH . 
H 7 HOH B 44 344 1049 HOH HOH . 
H 7 HOH B 45 345 1027 HOH HOH . 
H 7 HOH B 46 346 1161 HOH HOH . 
H 7 HOH B 47 347 1054 HOH HOH . 
H 7 HOH B 48 348 1124 HOH HOH . 
H 7 HOH B 49 349 1079 HOH HOH . 
H 7 HOH B 50 350 1004 HOH HOH . 
H 7 HOH B 51 351 1052 HOH HOH . 
H 7 HOH B 52 352 1025 HOH HOH . 
H 7 HOH B 53 353 1012 HOH HOH . 
H 7 HOH B 54 354 1073 HOH HOH . 
H 7 HOH B 55 355 1150 HOH HOH . 
H 7 HOH B 56 356 1022 HOH HOH . 
H 7 HOH B 57 357 1146 HOH HOH . 
H 7 HOH B 58 358 1102 HOH HOH . 
H 7 HOH B 59 359 1128 HOH HOH . 
H 7 HOH B 60 360 1037 HOH HOH . 
H 7 HOH B 61 361 1058 HOH HOH . 
H 7 HOH B 62 362 1053 HOH HOH . 
H 7 HOH B 63 363 1032 HOH HOH . 
H 7 HOH B 64 364 1166 HOH HOH . 
H 7 HOH B 65 365 1117 HOH HOH . 
H 7 HOH B 66 366 1111 HOH HOH . 
H 7 HOH B 67 367 1157 HOH HOH . 
H 7 HOH B 68 368 1007 HOH HOH . 
H 7 HOH B 69 369 1149 HOH HOH . 
H 7 HOH B 70 370 1106 HOH HOH . 
H 7 HOH B 71 371 1067 HOH HOH . 
H 7 HOH B 72 372 1016 HOH HOH . 
H 7 HOH B 73 373 1132 HOH HOH . 
H 7 HOH B 74 374 1005 HOH HOH . 
H 7 HOH B 75 375 1087 HOH HOH . 
H 7 HOH B 76 376 1140 HOH HOH . 
H 7 HOH B 77 377 1162 HOH HOH . 
H 7 HOH B 78 378 1139 HOH HOH . 
H 7 HOH B 79 379 1108 HOH HOH . 
H 7 HOH B 80 380 1135 HOH HOH . 
H 7 HOH B 81 381 1035 HOH HOH . 
H 7 HOH B 82 382 1041 HOH HOH . 
H 7 HOH B 83 383 1047 HOH HOH . 
H 7 HOH B 84 384 1044 HOH HOH . 
H 7 HOH B 85 385 1023 HOH HOH . 
H 7 HOH B 86 386 1033 HOH HOH . 
H 7 HOH B 87 387 1071 HOH HOH . 
H 7 HOH B 88 388 1045 HOH HOH . 
H 7 HOH B 89 389 1031 HOH HOH . 
H 7 HOH B 90 390 1144 HOH HOH . 
H 7 HOH B 91 391 1098 HOH HOH . 
H 7 HOH B 92 392 1061 HOH HOH . 
H 7 HOH B 93 393 1145 HOH HOH . 
H 7 HOH B 94 394 1137 HOH HOH . 
H 7 HOH B 95 395 1134 HOH HOH . 
H 7 HOH B 96 396 1097 HOH HOH . 
H 7 HOH B 97 397 1085 HOH HOH . 
H 7 HOH B 98 398 1131 HOH HOH . 
H 7 HOH B 99 399 1170 HOH HOH . 
H 7 HOH B 100 400 1080 HOH HOH . 
H 7 HOH B 101 401 1112 HOH HOH . 
H 7 HOH B 102 402 1084 HOH HOH . 
H 7 HOH B 103 403 1119 HOH HOH . 
H 7 HOH B 104 404 1130 HOH HOH . 
H 7 HOH B 105 405 1122 HOH HOH . 
I 7 HOH C 1 301 1158 HOH HOH . 
I 7 HOH C 2 302 1093 HOH HOH . 
I 7 HOH C 3 303 1153 HOH HOH . 
I 7 HOH C 4 304 1075 HOH HOH . 
I 7 HOH C 5 305 1050 HOH HOH . 
I 7 HOH C 6 306 1019 HOH HOH . 
I 7 HOH C 7 307 1056 HOH HOH . 
I 7 HOH C 8 308 1020 HOH HOH . 
I 7 HOH C 9 309 1169 HOH HOH . 
I 7 HOH C 10 310 1092 HOH HOH . 
I 7 HOH C 11 311 1030 HOH HOH . 
I 7 HOH C 12 312 1060 HOH HOH . 
I 7 HOH C 13 313 1011 HOH HOH . 
I 7 HOH C 14 314 1018 HOH HOH . 
I 7 HOH C 15 315 1013 HOH HOH . 
I 7 HOH C 16 316 1138 HOH HOH . 
I 7 HOH C 17 317 1095 HOH HOH . 
I 7 HOH C 18 318 1114 HOH HOH . 
I 7 HOH C 19 319 1074 HOH HOH . 
I 7 HOH C 20 320 1034 HOH HOH . 
I 7 HOH C 21 321 1009 HOH HOH . 
I 7 HOH C 22 322 1065 HOH HOH . 
I 7 HOH C 23 323 1099 HOH HOH . 
I 7 HOH C 24 324 1086 HOH HOH . 
I 7 HOH C 25 325 1154 HOH HOH . 
I 7 HOH C 26 326 1141 HOH HOH . 
I 7 HOH C 27 327 1064 HOH HOH . 
I 7 HOH C 28 328 1083 HOH HOH . 
I 7 HOH C 29 329 1103 HOH HOH . 
I 7 HOH C 30 330 1001 HOH HOH . 
I 7 HOH C 31 331 1002 HOH HOH . 
I 7 HOH C 32 332 1147 HOH HOH . 
I 7 HOH C 33 333 1113 HOH HOH . 
I 7 HOH C 34 334 1015 HOH HOH . 
I 7 HOH C 35 335 1063 HOH HOH . 
I 7 HOH C 36 336 1101 HOH HOH . 
I 7 HOH C 37 337 1094 HOH HOH . 
I 7 HOH C 38 338 1029 HOH HOH . 
I 7 HOH C 39 339 1155 HOH HOH . 
I 7 HOH C 40 340 1123 HOH HOH . 
I 7 HOH C 41 341 1070 HOH HOH . 
I 7 HOH C 42 342 1143 HOH HOH . 
I 7 HOH C 43 343 1082 HOH HOH . 
I 7 HOH C 44 344 1040 HOH HOH . 
I 7 HOH C 45 345 1096 HOH HOH . 
I 7 HOH C 46 346 1028 HOH HOH . 
I 7 HOH C 47 347 1160 HOH HOH . 
I 7 HOH C 48 348 1165 HOH HOH . 
I 7 HOH C 49 349 1077 HOH HOH . 
I 7 HOH C 50 350 1105 HOH HOH . 
I 7 HOH C 51 351 1136 HOH HOH . 
I 7 HOH C 52 352 1164 HOH HOH . 
I 7 HOH C 53 353 1068 HOH HOH . 
I 7 HOH C 54 354 1129 HOH HOH . 
I 7 HOH C 55 355 1168 HOH HOH . 
I 7 HOH C 56 356 1159 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           I 
_atom_site.label_atom_id         I 
_atom_site.label_comp_id         IOD 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         F 
_atom_site.label_entity_id       6 
_atom_site.Cartn_x               34.688 
_atom_site.Cartn_y               0 
_atom_site.Cartn_z               19.785 
_atom_site.occupancy             0.17 
_atom_site.B_iso_or_equiv        19.91 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          I 
_atom_site.auth_comp_id          IOD 
_atom_site.auth_seq_id           201 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           268 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#