data_5R4H
#
_model_server_result.job_id            ZvcDFxXkBNtCrUY8dn0LMw 
_model_server_result.datetime_utc      '2024-11-16 10:00:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5r4h 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":3002}' 
#
_entry.id    5R4H 
#
_exptl.entry_id    5R4H 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              122.143 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          96.33 
_cell.angle_gamma         90 
_cell.entry_id            5R4H 
_cell.length_a            112.423 
_cell.length_b            27.44 
_cell.length_c            38.354 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5R4H 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C4 H12 N O3 1' 
_chem_comp.formula_weight    122.143 
_chem_comp.id                TRS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'TRIS BUFFER' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C C1 TRS sing 373 n n 
C C2 TRS sing 374 n n 
C C3 TRS sing 375 n n 
C N TRS sing 376 n n 
C1 O1 TRS sing 377 n n 
C1 H11 TRS sing 378 n n 
C1 H12 TRS sing 379 n n 
C2 O2 TRS sing 380 n n 
C2 H21 TRS sing 381 n n 
C2 H22 TRS sing 382 n n 
C3 O3 TRS sing 383 n n 
C3 H31 TRS sing 384 n n 
C3 H32 TRS sing 385 n n 
N HN1 TRS sing 386 n n 
N HN2 TRS sing 387 n n 
N HN3 TRS sing 388 n n 
O1 HO1 TRS sing 389 n n 
O2 HO2 TRS sing 390 n n 
O3 HO3 TRS sing 391 n n 
#
_atom_sites.entry_id                     5R4H 
_atom_sites.fract_transf_matrix[1][1]    0.008895 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000987 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.036443 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.026233 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 DMS A 1 3001 2 DMS DMS . 
C 3 TRS A 1 3002 1 TRS TRS . 
D 4 HWH A 1 3003 1 HWH LIG . 
E 5 HOH A 1 3101 40 HOH HOH . 
E 5 HOH A 2 3102 147 HOH HOH . 
E 5 HOH A 3 3103 101 HOH HOH . 
E 5 HOH A 4 3104 29 HOH HOH . 
E 5 HOH A 5 3105 34 HOH HOH . 
E 5 HOH A 6 3106 33 HOH HOH . 
E 5 HOH A 7 3107 23 HOH HOH . 
E 5 HOH A 8 3108 153 HOH HOH . 
E 5 HOH A 9 3109 21 HOH HOH . 
E 5 HOH A 10 3110 1 HOH HOH . 
E 5 HOH A 11 3111 37 HOH HOH . 
E 5 HOH A 12 3112 98 HOH HOH . 
E 5 HOH A 13 3113 152 HOH HOH . 
E 5 HOH A 14 3114 103 HOH HOH . 
E 5 HOH A 15 3115 170 HOH HOH . 
E 5 HOH A 16 3116 44 HOH HOH . 
E 5 HOH A 17 3117 77 HOH HOH . 
E 5 HOH A 18 3118 20 HOH HOH . 
E 5 HOH A 19 3119 91 HOH HOH . 
E 5 HOH A 20 3120 53 HOH HOH . 
E 5 HOH A 21 3121 144 HOH HOH . 
E 5 HOH A 22 3122 163 HOH HOH . 
E 5 HOH A 23 3123 71 HOH HOH . 
E 5 HOH A 24 3124 141 HOH HOH . 
E 5 HOH A 25 3125 160 HOH HOH . 
E 5 HOH A 26 3126 128 HOH HOH . 
E 5 HOH A 27 3127 116 HOH HOH . 
E 5 HOH A 28 3128 157 HOH HOH . 
E 5 HOH A 29 3129 106 HOH HOH . 
E 5 HOH A 30 3130 8 HOH HOH . 
E 5 HOH A 31 3131 172 HOH HOH . 
E 5 HOH A 32 3132 38 HOH HOH . 
E 5 HOH A 33 3133 61 HOH HOH . 
E 5 HOH A 34 3134 78 HOH HOH . 
E 5 HOH A 35 3135 162 HOH HOH . 
E 5 HOH A 36 3136 80 HOH HOH . 
E 5 HOH A 37 3137 12 HOH HOH . 
E 5 HOH A 38 3138 19 HOH HOH . 
E 5 HOH A 39 3139 25 HOH HOH . 
E 5 HOH A 40 3140 4 HOH HOH . 
E 5 HOH A 41 3141 111 HOH HOH . 
E 5 HOH A 42 3142 59 HOH HOH . 
E 5 HOH A 43 3143 151 HOH HOH . 
E 5 HOH A 44 3144 92 HOH HOH . 
E 5 HOH A 45 3145 145 HOH HOH . 
E 5 HOH A 46 3146 104 HOH HOH . 
E 5 HOH A 47 3147 36 HOH HOH . 
E 5 HOH A 48 3148 54 HOH HOH . 
E 5 HOH A 49 3149 46 HOH HOH . 
E 5 HOH A 50 3150 52 HOH HOH . 
E 5 HOH A 51 3151 64 HOH HOH . 
E 5 HOH A 52 3152 65 HOH HOH . 
E 5 HOH A 53 3153 135 HOH HOH . 
E 5 HOH A 54 3154 117 HOH HOH . 
E 5 HOH A 55 3155 69 HOH HOH . 
E 5 HOH A 56 3156 26 HOH HOH . 
E 5 HOH A 57 3157 82 HOH HOH . 
E 5 HOH A 58 3158 18 HOH HOH . 
E 5 HOH A 59 3159 9 HOH HOH . 
E 5 HOH A 60 3160 118 HOH HOH . 
E 5 HOH A 61 3161 68 HOH HOH . 
E 5 HOH A 62 3162 62 HOH HOH . 
E 5 HOH A 63 3163 150 HOH HOH . 
E 5 HOH A 64 3164 16 HOH HOH . 
E 5 HOH A 65 3165 50 HOH HOH . 
E 5 HOH A 66 3166 94 HOH HOH . 
E 5 HOH A 67 3167 39 HOH HOH . 
E 5 HOH A 68 3168 47 HOH HOH . 
E 5 HOH A 69 3169 131 HOH HOH . 
E 5 HOH A 70 3170 113 HOH HOH . 
E 5 HOH A 71 3171 95 HOH HOH . 
E 5 HOH A 72 3172 146 HOH HOH . 
E 5 HOH A 73 3173 13 HOH HOH . 
E 5 HOH A 74 3174 45 HOH HOH . 
E 5 HOH A 75 3175 11 HOH HOH . 
E 5 HOH A 76 3176 122 HOH HOH . 
E 5 HOH A 77 3177 166 HOH HOH . 
E 5 HOH A 78 3178 79 HOH HOH . 
E 5 HOH A 79 3179 48 HOH HOH . 
E 5 HOH A 80 3180 17 HOH HOH . 
E 5 HOH A 81 3181 96 HOH HOH . 
E 5 HOH A 82 3182 22 HOH HOH . 
E 5 HOH A 83 3183 124 HOH HOH . 
E 5 HOH A 84 3184 31 HOH HOH . 
E 5 HOH A 85 3185 14 HOH HOH . 
E 5 HOH A 86 3186 125 HOH HOH . 
E 5 HOH A 87 3187 60 HOH HOH . 
E 5 HOH A 88 3188 24 HOH HOH . 
E 5 HOH A 89 3189 72 HOH HOH . 
E 5 HOH A 90 3190 149 HOH HOH . 
E 5 HOH A 91 3191 126 HOH HOH . 
E 5 HOH A 92 3192 3 HOH HOH . 
E 5 HOH A 93 3193 66 HOH HOH . 
E 5 HOH A 94 3194 5 HOH HOH . 
E 5 HOH A 95 3195 6 HOH HOH . 
E 5 HOH A 96 3196 27 HOH HOH . 
E 5 HOH A 97 3197 32 HOH HOH . 
E 5 HOH A 98 3198 51 HOH HOH . 
E 5 HOH A 99 3199 42 HOH HOH . 
E 5 HOH A 100 3200 112 HOH HOH . 
E 5 HOH A 101 3201 134 HOH HOH . 
E 5 HOH A 102 3202 142 HOH HOH . 
E 5 HOH A 103 3203 83 HOH HOH . 
E 5 HOH A 104 3204 102 HOH HOH . 
E 5 HOH A 105 3205 15 HOH HOH . 
E 5 HOH A 106 3206 81 HOH HOH . 
E 5 HOH A 107 3207 90 HOH HOH . 
E 5 HOH A 108 3208 155 HOH HOH . 
E 5 HOH A 109 3209 89 HOH HOH . 
E 5 HOH A 110 3210 133 HOH HOH . 
E 5 HOH A 111 3211 2 HOH HOH . 
E 5 HOH A 112 3212 120 HOH HOH . 
E 5 HOH A 113 3213 63 HOH HOH . 
E 5 HOH A 114 3214 7 HOH HOH . 
E 5 HOH A 115 3215 115 HOH HOH . 
E 5 HOH A 116 3216 108 HOH HOH . 
E 5 HOH A 117 3217 35 HOH HOH . 
E 5 HOH A 118 3218 73 HOH HOH . 
E 5 HOH A 119 3219 148 HOH HOH . 
E 5 HOH A 120 3220 49 HOH HOH . 
E 5 HOH A 121 3221 109 HOH HOH . 
E 5 HOH A 122 3222 171 HOH HOH . 
E 5 HOH A 123 3223 161 HOH HOH . 
E 5 HOH A 124 3224 130 HOH HOH . 
E 5 HOH A 125 3225 43 HOH HOH . 
E 5 HOH A 126 3226 67 HOH HOH . 
E 5 HOH A 127 3227 30 HOH HOH . 
E 5 HOH A 128 3228 76 HOH HOH . 
E 5 HOH A 129 3229 114 HOH HOH . 
E 5 HOH A 130 3230 87 HOH HOH . 
E 5 HOH A 131 3231 165 HOH HOH . 
E 5 HOH A 132 3232 70 HOH HOH . 
E 5 HOH A 133 3233 168 HOH HOH . 
E 5 HOH A 134 3234 86 HOH HOH . 
E 5 HOH A 135 3235 129 HOH HOH . 
E 5 HOH A 136 3236 10 HOH HOH . 
E 5 HOH A 137 3237 107 HOH HOH . 
E 5 HOH A 138 3238 57 HOH HOH . 
E 5 HOH A 139 3239 84 HOH HOH . 
E 5 HOH A 140 3240 88 HOH HOH . 
E 5 HOH A 141 3241 100 HOH HOH . 
E 5 HOH A 142 3242 97 HOH HOH . 
E 5 HOH A 143 3243 138 HOH HOH . 
E 5 HOH A 144 3244 136 HOH HOH . 
E 5 HOH A 145 3245 132 HOH HOH . 
E 5 HOH A 146 3246 28 HOH HOH . 
E 5 HOH A 147 3247 167 HOH HOH . 
E 5 HOH A 148 3248 156 HOH HOH . 
E 5 HOH A 149 3249 56 HOH HOH . 
E 5 HOH A 150 3250 75 HOH HOH . 
E 5 HOH A 151 3251 169 HOH HOH . 
E 5 HOH A 152 3252 85 HOH HOH . 
E 5 HOH A 153 3253 58 HOH HOH . 
E 5 HOH A 154 3254 139 HOH HOH . 
E 5 HOH A 155 3255 140 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C TRS . . . C 3 -23.399 23.852 -3.611 1 52.11 ? C TRS 3002 A 1 
HETATM 2 C C1 TRS . . . C 3 -24.816 23.27 -3.421 1 49.86 ? C1 TRS 3002 A 1 
HETATM 3 C C2 TRS . . . C 3 -22.537 23.122 -2.639 1 51.23 ? C2 TRS 3002 A 1 
HETATM 4 C C3 TRS . . . C 3 -23.29 25.356 -3.342 1 53.93 ? C3 TRS 3002 A 1 
HETATM 5 N N TRS . . . C 3 -22.786 23.541 -4.948 1 53.85 ? N TRS 3002 A 1 
HETATM 6 O O1 TRS . . . C 3 -24.831 21.857 -3.128 1 40.19 ? O1 TRS 3002 A 1 
HETATM 7 O O2 TRS . . . C 3 -22.176 21.922 -3.322 1 53.37 ? O2 TRS 3002 A 1 
HETATM 8 O O3 TRS . . . C 3 -22.105 25.924 -3.926 1 54.36 ? O3 TRS 3002 A 1 
#
_model_server_stats.io_time_ms              51 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           338 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           8 
#