data_5R4M
#
_model_server_result.job_id            rZSDlJqVvxhBOcNpg-odvw 
_model_server_result.datetime_utc      '2024-11-16 15:44:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5r4m 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":3002}' 
#
_entry.id    5R4M 
#
_exptl.entry_id    5R4M 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              122.143 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          96.08 
_cell.angle_gamma         90 
_cell.entry_id            5R4M 
_cell.length_a            111.846 
_cell.length_b            27.385 
_cell.length_c            38.245 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5R4M 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C4 H12 N O3 1' 
_chem_comp.formula_weight    122.143 
_chem_comp.id                TRS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'TRIS BUFFER' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C C1 TRS sing 373 n n 
C C2 TRS sing 374 n n 
C C3 TRS sing 375 n n 
C N TRS sing 376 n n 
C1 O1 TRS sing 377 n n 
C1 H11 TRS sing 378 n n 
C1 H12 TRS sing 379 n n 
C2 O2 TRS sing 380 n n 
C2 H21 TRS sing 381 n n 
C2 H22 TRS sing 382 n n 
C3 O3 TRS sing 383 n n 
C3 H31 TRS sing 384 n n 
C3 H32 TRS sing 385 n n 
N HN1 TRS sing 386 n n 
N HN2 TRS sing 387 n n 
N HN3 TRS sing 388 n n 
O1 HO1 TRS sing 389 n n 
O2 HO2 TRS sing 390 n n 
O3 HO3 TRS sing 391 n n 
#
_atom_sites.entry_id                     5R4M 
_atom_sites.fract_transf_matrix[1][1]    0.008941 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000952 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.036516 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.026295 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 DMS A 1 3001 2 DMS DMS . 
C 3 TRS A 1 3002 1 TRS TRS . 
D 4 M25 A 1 3003 1 M25 LIG . 
E 5 HOH A 1 3101 40 HOH HOH . 
E 5 HOH A 2 3102 147 HOH HOH . 
E 5 HOH A 3 3103 34 HOH HOH . 
E 5 HOH A 4 3104 1 HOH HOH . 
E 5 HOH A 5 3105 37 HOH HOH . 
E 5 HOH A 6 3106 101 HOH HOH . 
E 5 HOH A 7 3107 145 HOH HOH . 
E 5 HOH A 8 3108 153 HOH HOH . 
E 5 HOH A 9 3109 23 HOH HOH . 
E 5 HOH A 10 3110 21 HOH HOH . 
E 5 HOH A 11 3111 128 HOH HOH . 
E 5 HOH A 12 3112 33 HOH HOH . 
E 5 HOH A 13 3113 103 HOH HOH . 
E 5 HOH A 14 3114 44 HOH HOH . 
E 5 HOH A 15 3115 66 HOH HOH . 
E 5 HOH A 16 3116 91 HOH HOH . 
E 5 HOH A 17 3117 19 HOH HOH . 
E 5 HOH A 18 3118 163 HOH HOH . 
E 5 HOH A 19 3119 53 HOH HOH . 
E 5 HOH A 20 3120 98 HOH HOH . 
E 5 HOH A 21 3121 61 HOH HOH . 
E 5 HOH A 22 3122 20 HOH HOH . 
E 5 HOH A 23 3123 151 HOH HOH . 
E 5 HOH A 24 3124 122 HOH HOH . 
E 5 HOH A 25 3125 68 HOH HOH . 
E 5 HOH A 26 3126 166 HOH HOH . 
E 5 HOH A 27 3127 157 HOH HOH . 
E 5 HOH A 28 3128 77 HOH HOH . 
E 5 HOH A 29 3129 54 HOH HOH . 
E 5 HOH A 30 3130 25 HOH HOH . 
E 5 HOH A 31 3131 83 HOH HOH . 
E 5 HOH A 32 3132 116 HOH HOH . 
E 5 HOH A 33 3133 117 HOH HOH . 
E 5 HOH A 34 3134 115 HOH HOH . 
E 5 HOH A 35 3135 12 HOH HOH . 
E 5 HOH A 36 3136 92 HOH HOH . 
E 5 HOH A 37 3137 124 HOH HOH . 
E 5 HOH A 38 3138 8 HOH HOH . 
E 5 HOH A 39 3139 162 HOH HOH . 
E 5 HOH A 40 3140 18 HOH HOH . 
E 5 HOH A 41 3141 72 HOH HOH . 
E 5 HOH A 42 3142 118 HOH HOH . 
E 5 HOH A 43 3143 141 HOH HOH . 
E 5 HOH A 44 3144 160 HOH HOH . 
E 5 HOH A 45 3145 135 HOH HOH . 
E 5 HOH A 46 3146 80 HOH HOH . 
E 5 HOH A 47 3147 111 HOH HOH . 
E 5 HOH A 48 3148 46 HOH HOH . 
E 5 HOH A 49 3149 146 HOH HOH . 
E 5 HOH A 50 3150 36 HOH HOH . 
E 5 HOH A 51 3151 4 HOH HOH . 
E 5 HOH A 52 3152 52 HOH HOH . 
E 5 HOH A 53 3153 59 HOH HOH . 
E 5 HOH A 54 3154 113 HOH HOH . 
E 5 HOH A 55 3155 170 HOH HOH . 
E 5 HOH A 56 3156 104 HOH HOH . 
E 5 HOH A 57 3157 45 HOH HOH . 
E 5 HOH A 58 3158 126 HOH HOH . 
E 5 HOH A 59 3159 26 HOH HOH . 
E 5 HOH A 60 3160 131 HOH HOH . 
E 5 HOH A 61 3161 11 HOH HOH . 
E 5 HOH A 62 3162 64 HOH HOH . 
E 5 HOH A 63 3163 106 HOH HOH . 
E 5 HOH A 64 3164 94 HOH HOH . 
E 5 HOH A 65 3165 16 HOH HOH . 
E 5 HOH A 66 3166 50 HOH HOH . 
E 5 HOH A 67 3167 82 HOH HOH . 
E 5 HOH A 68 3168 95 HOH HOH . 
E 5 HOH A 69 3169 39 HOH HOH . 
E 5 HOH A 70 3170 65 HOH HOH . 
E 5 HOH A 71 3171 134 HOH HOH . 
E 5 HOH A 72 3172 81 HOH HOH . 
E 5 HOH A 73 3173 17 HOH HOH . 
E 5 HOH A 74 3174 150 HOH HOH . 
E 5 HOH A 75 3175 27 HOH HOH . 
E 5 HOH A 76 3176 22 HOH HOH . 
E 5 HOH A 77 3177 48 HOH HOH . 
E 5 HOH A 78 3178 9 HOH HOH . 
E 5 HOH A 79 3179 3 HOH HOH . 
E 5 HOH A 80 3180 79 HOH HOH . 
E 5 HOH A 81 3181 78 HOH HOH . 
E 5 HOH A 82 3182 29 HOH HOH . 
E 5 HOH A 83 3183 24 HOH HOH . 
E 5 HOH A 84 3184 31 HOH HOH . 
E 5 HOH A 85 3185 102 HOH HOH . 
E 5 HOH A 86 3186 69 HOH HOH . 
E 5 HOH A 87 3187 62 HOH HOH . 
E 5 HOH A 88 3188 6 HOH HOH . 
E 5 HOH A 89 3189 47 HOH HOH . 
E 5 HOH A 90 3190 42 HOH HOH . 
E 5 HOH A 91 3191 5 HOH HOH . 
E 5 HOH A 92 3192 13 HOH HOH . 
E 5 HOH A 93 3193 32 HOH HOH . 
E 5 HOH A 94 3194 51 HOH HOH . 
E 5 HOH A 95 3195 149 HOH HOH . 
E 5 HOH A 96 3196 133 HOH HOH . 
E 5 HOH A 97 3197 15 HOH HOH . 
E 5 HOH A 98 3198 89 HOH HOH . 
E 5 HOH A 99 3199 71 HOH HOH . 
E 5 HOH A 100 3200 63 HOH HOH . 
E 5 HOH A 101 3201 96 HOH HOH . 
E 5 HOH A 102 3202 67 HOH HOH . 
E 5 HOH A 103 3203 2 HOH HOH . 
E 5 HOH A 104 3204 73 HOH HOH . 
E 5 HOH A 105 3205 108 HOH HOH . 
E 5 HOH A 106 3206 112 HOH HOH . 
E 5 HOH A 107 3207 155 HOH HOH . 
E 5 HOH A 108 3208 161 HOH HOH . 
E 5 HOH A 109 3209 90 HOH HOH . 
E 5 HOH A 110 3210 109 HOH HOH . 
E 5 HOH A 111 3211 35 HOH HOH . 
E 5 HOH A 112 3212 171 HOH HOH . 
E 5 HOH A 113 3213 120 HOH HOH . 
E 5 HOH A 114 3214 130 HOH HOH . 
E 5 HOH A 115 3215 86 HOH HOH . 
E 5 HOH A 116 3216 7 HOH HOH . 
E 5 HOH A 117 3217 148 HOH HOH . 
E 5 HOH A 118 3218 49 HOH HOH . 
E 5 HOH A 119 3219 43 HOH HOH . 
E 5 HOH A 120 3220 60 HOH HOH . 
E 5 HOH A 121 3221 76 HOH HOH . 
E 5 HOH A 122 3222 125 HOH HOH . 
E 5 HOH A 123 3223 30 HOH HOH . 
E 5 HOH A 124 3224 114 HOH HOH . 
E 5 HOH A 125 3225 87 HOH HOH . 
E 5 HOH A 126 3226 168 HOH HOH . 
E 5 HOH A 127 3227 165 HOH HOH . 
E 5 HOH A 128 3228 70 HOH HOH . 
E 5 HOH A 129 3229 100 HOH HOH . 
E 5 HOH A 130 3230 97 HOH HOH . 
E 5 HOH A 131 3231 10 HOH HOH . 
E 5 HOH A 132 3232 88 HOH HOH . 
E 5 HOH A 133 3233 57 HOH HOH . 
E 5 HOH A 134 3234 138 HOH HOH . 
E 5 HOH A 135 3235 129 HOH HOH . 
E 5 HOH A 136 3236 136 HOH HOH . 
E 5 HOH A 137 3237 75 HOH HOH . 
E 5 HOH A 138 3238 156 HOH HOH . 
E 5 HOH A 139 3239 167 HOH HOH . 
E 5 HOH A 140 3240 85 HOH HOH . 
E 5 HOH A 141 3241 56 HOH HOH . 
E 5 HOH A 142 3242 152 HOH HOH . 
E 5 HOH A 143 3243 107 HOH HOH . 
E 5 HOH A 144 3244 144 HOH HOH . 
E 5 HOH A 145 3245 132 HOH HOH . 
E 5 HOH A 146 3246 58 HOH HOH . 
E 5 HOH A 147 3247 169 HOH HOH . 
E 5 HOH A 148 3248 139 HOH HOH . 
E 5 HOH A 149 3249 84 HOH HOH . 
E 5 HOH A 150 3250 28 HOH HOH . 
E 5 HOH A 151 3251 140 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C TRS . . . C 3 -23.296 23.957 -3.646 1 49 ? C TRS 3002 A 1 
HETATM 2 C C1 TRS . . . C 3 -24.752 23.501 -3.494 1 49.21 ? C1 TRS 3002 A 1 
HETATM 3 C C2 TRS . . . C 3 -22.51 23.173 -2.629 1 47.4 ? C2 TRS 3002 A 1 
HETATM 4 C C3 TRS . . . C 3 -23.094 25.457 -3.419 1 49.62 ? C3 TRS 3002 A 1 
HETATM 5 N N TRS . . . C 3 -22.752 23.602 -4.998 1 49.51 ? N TRS 3002 A 1 
HETATM 6 O O1 TRS . . . C 3 -24.868 22.072 -3.375 1 48.48 ? O1 TRS 3002 A 1 
HETATM 7 O O2 TRS . . . C 3 -22.179 21.937 -3.261 1 47.67 ? O2 TRS 3002 A 1 
HETATM 8 O O3 TRS . . . C 3 -21.968 25.949 -4.16 1 50.16 ? O3 TRS 3002 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           297 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           8 
#