data_5R4N
#
_model_server_result.job_id            HAzgigHF1bklsD7sIkl8kw 
_model_server_result.datetime_utc      '2025-02-18 13:58:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5r4n 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":3003}' 
#
_entry.id    5R4N 
#
_exptl.entry_id    5R4N 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              199.25 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            4-acetyl-N-ethylpiperazine-1-carboxamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          96.01 
_cell.angle_gamma         90 
_cell.entry_id            5R4N 
_cell.length_a            112.04 
_cell.length_b            27.37 
_cell.length_c            38.19 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5R4N 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C9 H17 N3 O2' 
_chem_comp.formula_weight    199.25 
_chem_comp.id                K3D 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              4-acetyl-N-ethylpiperazine-1-carboxamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O C2 K3D doub 182 n n 
C1 N K3D sing 183 n n 
C1 C K3D sing 184 n n 
C3 C4 K3D sing 185 n n 
C3 N1 K3D sing 186 n n 
C2 N K3D sing 187 n n 
C2 N1 K3D sing 188 n n 
C8 C7 K3D sing 189 n n 
C4 N2 K3D sing 190 n n 
N1 C6 K3D sing 191 n n 
N2 C7 K3D sing 192 n n 
N2 C5 K3D sing 193 n n 
C7 O1 K3D doub 194 n n 
C6 C5 K3D sing 195 n n 
C4 H1 K3D sing 196 n n 
C4 H2 K3D sing 197 n n 
C5 H3 K3D sing 198 n n 
C5 H4 K3D sing 199 n n 
C6 H5 K3D sing 200 n n 
C6 H6 K3D sing 201 n n 
C8 H7 K3D sing 202 n n 
C8 H8 K3D sing 203 n n 
C8 H9 K3D sing 204 n n 
N H10 K3D sing 205 n n 
C H11 K3D sing 206 n n 
C H12 K3D sing 207 n n 
C H13 K3D sing 208 n n 
C1 H14 K3D sing 209 n n 
C1 H15 K3D sing 210 n n 
C3 H16 K3D sing 211 n n 
C3 H17 K3D sing 212 n n 
#
_atom_sites.entry_id                     5R4N 
_atom_sites.fract_transf_matrix[1][1]    0.008925 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00094 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.036536 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.02633 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 DMS A 1 3001 2 DMS DMS . 
C 3 TRS A 1 3002 1 TRS TRS . 
D 4 K3D A 1 3003 1 K3D LIG . 
E 5 HOH A 1 3101 101 HOH HOH . 
E 5 HOH A 2 3102 40 HOH HOH . 
E 5 HOH A 3 3103 147 HOH HOH . 
E 5 HOH A 4 3104 91 HOH HOH . 
E 5 HOH A 5 3105 125 HOH HOH . 
E 5 HOH A 6 3106 29 HOH HOH . 
E 5 HOH A 7 3107 53 HOH HOH . 
E 5 HOH A 8 3108 37 HOH HOH . 
E 5 HOH A 9 3109 92 HOH HOH . 
E 5 HOH A 10 3110 33 HOH HOH . 
E 5 HOH A 11 3111 23 HOH HOH . 
E 5 HOH A 12 3112 166 HOH HOH . 
E 5 HOH A 13 3113 1 HOH HOH . 
E 5 HOH A 14 3114 68 HOH HOH . 
E 5 HOH A 15 3115 21 HOH HOH . 
E 5 HOH A 16 3116 115 HOH HOH . 
E 5 HOH A 17 3117 124 HOH HOH . 
E 5 HOH A 18 3118 146 HOH HOH . 
E 5 HOH A 19 3119 128 HOH HOH . 
E 5 HOH A 20 3120 117 HOH HOH . 
E 5 HOH A 21 3121 80 HOH HOH . 
E 5 HOH A 22 3122 163 HOH HOH . 
E 5 HOH A 23 3123 19 HOH HOH . 
E 5 HOH A 24 3124 103 HOH HOH . 
E 5 HOH A 25 3125 44 HOH HOH . 
E 5 HOH A 26 3126 83 HOH HOH . 
E 5 HOH A 27 3127 78 HOH HOH . 
E 5 HOH A 28 3128 98 HOH HOH . 
E 5 HOH A 29 3129 122 HOH HOH . 
E 5 HOH A 30 3130 25 HOH HOH . 
E 5 HOH A 31 3131 54 HOH HOH . 
E 5 HOH A 32 3132 141 HOH HOH . 
E 5 HOH A 33 3133 61 HOH HOH . 
E 5 HOH A 34 3134 38 HOH HOH . 
E 5 HOH A 35 3135 113 HOH HOH . 
E 5 HOH A 36 3136 77 HOH HOH . 
E 5 HOH A 37 3137 20 HOH HOH . 
E 5 HOH A 38 3138 65 HOH HOH . 
E 5 HOH A 39 3139 118 HOH HOH . 
E 5 HOH A 40 3140 9 HOH HOH . 
E 5 HOH A 41 3141 104 HOH HOH . 
E 5 HOH A 42 3142 52 HOH HOH . 
E 5 HOH A 43 3143 18 HOH HOH . 
E 5 HOH A 44 3144 16 HOH HOH . 
E 5 HOH A 45 3145 8 HOH HOH . 
E 5 HOH A 46 3146 116 HOH HOH . 
E 5 HOH A 47 3147 153 HOH HOH . 
E 5 HOH A 48 3148 46 HOH HOH . 
E 5 HOH A 49 3149 4 HOH HOH . 
E 5 HOH A 50 3150 36 HOH HOH . 
E 5 HOH A 51 3151 94 HOH HOH . 
E 5 HOH A 52 3152 34 HOH HOH . 
E 5 HOH A 53 3153 48 HOH HOH . 
E 5 HOH A 54 3154 72 HOH HOH . 
E 5 HOH A 55 3155 156 HOH HOH . 
E 5 HOH A 56 3156 39 HOH HOH . 
E 5 HOH A 57 3157 11 HOH HOH . 
E 5 HOH A 58 3158 86 HOH HOH . 
E 5 HOH A 59 3159 17 HOH HOH . 
E 5 HOH A 60 3160 26 HOH HOH . 
E 5 HOH A 61 3161 12 HOH HOH . 
E 5 HOH A 62 3162 24 HOH HOH . 
E 5 HOH A 63 3163 151 HOH HOH . 
E 5 HOH A 64 3164 142 HOH HOH . 
E 5 HOH A 65 3165 160 HOH HOH . 
E 5 HOH A 66 3166 111 HOH HOH . 
E 5 HOH A 67 3167 45 HOH HOH . 
E 5 HOH A 68 3168 95 HOH HOH . 
E 5 HOH A 69 3169 71 HOH HOH . 
E 5 HOH A 70 3170 131 HOH HOH . 
E 5 HOH A 71 3171 79 HOH HOH . 
E 5 HOH A 72 3172 81 HOH HOH . 
E 5 HOH A 73 3173 135 HOH HOH . 
E 5 HOH A 74 3174 82 HOH HOH . 
E 5 HOH A 75 3175 31 HOH HOH . 
E 5 HOH A 76 3176 42 HOH HOH . 
E 5 HOH A 77 3177 64 HOH HOH . 
E 5 HOH A 78 3178 59 HOH HOH . 
E 5 HOH A 79 3179 62 HOH HOH . 
E 5 HOH A 80 3180 3 HOH HOH . 
E 5 HOH A 81 3181 22 HOH HOH . 
E 5 HOH A 82 3182 120 HOH HOH . 
E 5 HOH A 83 3183 170 HOH HOH . 
E 5 HOH A 84 3184 50 HOH HOH . 
E 5 HOH A 85 3185 102 HOH HOH . 
E 5 HOH A 86 3186 32 HOH HOH . 
E 5 HOH A 87 3187 27 HOH HOH . 
E 5 HOH A 88 3188 14 HOH HOH . 
E 5 HOH A 89 3189 150 HOH HOH . 
E 5 HOH A 90 3190 13 HOH HOH . 
E 5 HOH A 91 3191 149 HOH HOH . 
E 5 HOH A 92 3192 126 HOH HOH . 
E 5 HOH A 93 3193 96 HOH HOH . 
E 5 HOH A 94 3194 6 HOH HOH . 
E 5 HOH A 95 3195 73 HOH HOH . 
E 5 HOH A 96 3196 51 HOH HOH . 
E 5 HOH A 97 3197 15 HOH HOH . 
E 5 HOH A 98 3198 106 HOH HOH . 
E 5 HOH A 99 3199 47 HOH HOH . 
E 5 HOH A 100 3200 145 HOH HOH . 
E 5 HOH A 101 3201 5 HOH HOH . 
E 5 HOH A 102 3202 112 HOH HOH . 
E 5 HOH A 103 3203 89 HOH HOH . 
E 5 HOH A 104 3204 63 HOH HOH . 
E 5 HOH A 105 3205 133 HOH HOH . 
E 5 HOH A 106 3206 2 HOH HOH . 
E 5 HOH A 107 3207 7 HOH HOH . 
E 5 HOH A 108 3208 157 HOH HOH . 
E 5 HOH A 109 3209 148 HOH HOH . 
E 5 HOH A 110 3210 130 HOH HOH . 
E 5 HOH A 111 3211 171 HOH HOH . 
E 5 HOH A 112 3212 108 HOH HOH . 
E 5 HOH A 113 3213 35 HOH HOH . 
E 5 HOH A 114 3214 134 HOH HOH . 
E 5 HOH A 115 3215 161 HOH HOH . 
E 5 HOH A 116 3216 109 HOH HOH . 
E 5 HOH A 117 3217 67 HOH HOH . 
E 5 HOH A 118 3218 114 HOH HOH . 
E 5 HOH A 119 3219 69 HOH HOH . 
E 5 HOH A 120 3220 76 HOH HOH . 
E 5 HOH A 121 3221 90 HOH HOH . 
E 5 HOH A 122 3222 66 HOH HOH . 
E 5 HOH A 123 3223 49 HOH HOH . 
E 5 HOH A 124 3224 43 HOH HOH . 
E 5 HOH A 125 3225 155 HOH HOH . 
E 5 HOH A 126 3226 87 HOH HOH . 
E 5 HOH A 127 3227 60 HOH HOH . 
E 5 HOH A 128 3228 30 HOH HOH . 
E 5 HOH A 129 3229 168 HOH HOH . 
E 5 HOH A 130 3230 57 HOH HOH . 
E 5 HOH A 131 3231 165 HOH HOH . 
E 5 HOH A 132 3232 70 HOH HOH . 
E 5 HOH A 133 3233 100 HOH HOH . 
E 5 HOH A 134 3234 97 HOH HOH . 
E 5 HOH A 135 3235 10 HOH HOH . 
E 5 HOH A 136 3236 88 HOH HOH . 
E 5 HOH A 137 3237 85 HOH HOH . 
E 5 HOH A 138 3238 162 HOH HOH . 
E 5 HOH A 139 3239 138 HOH HOH . 
E 5 HOH A 140 3240 144 HOH HOH . 
E 5 HOH A 141 3241 129 HOH HOH . 
E 5 HOH A 142 3242 75 HOH HOH . 
E 5 HOH A 143 3243 136 HOH HOH . 
E 5 HOH A 144 3244 56 HOH HOH . 
E 5 HOH A 145 3245 167 HOH HOH . 
E 5 HOH A 146 3246 132 HOH HOH . 
E 5 HOH A 147 3247 152 HOH HOH . 
E 5 HOH A 148 3248 107 HOH HOH . 
E 5 HOH A 149 3249 169 HOH HOH . 
E 5 HOH A 150 3250 58 HOH HOH . 
E 5 HOH A 151 3251 28 HOH HOH . 
E 5 HOH A 152 3252 139 HOH HOH . 
E 5 HOH A 153 3253 84 HOH HOH . 
E 5 HOH A 154 3254 140 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 K3D . . . D 4 -7.251 5.936 -12.9 0.82 24.07 ? N1 K3D 3003 A 1 
HETATM 2 C C4 K3D . . . D 4 -6.595 5.905 -10.503 0.82 22.08 ? C4 K3D 3003 A 1 
HETATM 3 C C5 K3D . . . D 4 -8.874 6.527 -11.153 0.82 23.51 ? C5 K3D 3003 A 1 
HETATM 4 C C6 K3D . . . D 4 -8.511 5.563 -12.264 0.82 23.41 ? C6 K3D 3003 A 1 
HETATM 5 C C7 K3D . . . D 4 -7.986 7.279 -8.966 0.82 19.16 ? C7 K3D 3003 A 1 
HETATM 6 C C8 K3D . . . D 4 -9.329 7.856 -8.605 0.82 17.22 ? C8 K3D 3003 A 1 
HETATM 7 N N K3D . . . D 4 -7.885 6.492 -15.084 0.82 30.52 ? N K3D 3003 A 1 
HETATM 8 C C K3D . . . D 4 -10.337 6.885 -15.102 0.82 29.91 ? C K3D 3003 A 1 
HETATM 9 O O K3D . . . D 4 -5.833 5.889 -14.665 0.82 27.64 ? O K3D 3003 A 1 
HETATM 10 C C1 K3D . . . D 4 -9.211 5.915 -15.318 0.82 31.09 ? C1 K3D 3003 A 1 
HETATM 11 C C2 K3D . . . D 4 -6.976 6.056 -14.238 0.82 26.43 ? C2 K3D 3003 A 1 
HETATM 12 C C3 K3D . . . D 4 -6.183 6.214 -11.932 0.82 23.4 ? C3 K3D 3003 A 1 
HETATM 13 N N2 K3D . . . D 4 -7.827 6.614 -10.13 0.82 21 ? N2 K3D 3003 A 1 
HETATM 14 O O1 K3D . . . D 4 -7.042 7.428 -8.196 0.82 16.24 ? O1 K3D 3003 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           1416 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           14 
#