data_5R4P # _model_server_result.job_id aMt6vyrMmQ_NCzetBilCkw _model_server_result.datetime_utc '2024-10-19 03:44:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5r4p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":303}' # _entry.id 5R4P # _exptl.entry_id 5R4P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5R4P _cell.length_a 59.68 _cell.length_b 59.68 _cell.length_c 214.53 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5R4P _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,K 1 1,2 B,G,H,I,J,L 2 1,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 3 'crystal symmetry operation' 6_554 -x,-x+y,-z-1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 -71.51 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 58 A GLU 88 1_555 H ZN ZN . B ZN 302 4_655 ? B ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc2 A ND1 HIS 59 A HIS 89 1_555 D ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.576 ? metalc ? metalc3 A NE2 HIS 59 A HIS 89 1_555 G ZN ZN . B ZN 301 3_655 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? metalc ? metalc4 A NE2 HIS 63 A HIS 93 1_555 H ZN ZN . B ZN 302 4_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc5 A NE1 TRP 119 A TRP 149 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.535 ? metalc ? metalc6 K O HOH . A HOH 401 4_545 H ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? metalc ? metalc7 K O HOH . A HOH 432 4_545 I ZN ZN . B ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.641 ? metalc ? metalc8 B OE1 GLU 58 B GLU 88 1_555 G ZN ZN . B ZN 301 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.13 ? metalc ? metalc9 B NE2 HIS 63 B HIS 93 1_555 G ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? metalc ? metalc10 B NE1 TRP 119 B TRP 149 1_555 J ZN ZN . B ZN 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? metalc ? metalc11 B NE2 HIS 134 B HIS 164 1_555 H ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.947 ? metalc ? metalc12 G ZN ZN . B ZN 301 1_555 L O HOH . B HOH 494 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5R4P _atom_sites.fract_transf_matrix[1][1] 0.016756 _atom_sites.fract_transf_matrix[1][2] 0.009674 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019348 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004661 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 301 4 ZN ZN . D 2 ZN A 1 302 6 ZN ZN . E 3 ACT A 1 303 1 ACT ACT . F 4 RVY A 1 304 1 RVY LIG . G 2 ZN B 1 301 1 ZN ZN . H 2 ZN B 1 302 2 ZN ZN . I 2 ZN B 1 303 3 ZN ZN . J 2 ZN B 1 304 5 ZN ZN . K 5 HOH A 1 401 173 HOH HOH . K 5 HOH A 2 402 268 HOH HOH . K 5 HOH A 3 403 42 HOH HOH . K 5 HOH A 4 404 185 HOH HOH . K 5 HOH A 5 405 241 HOH HOH . K 5 HOH A 6 406 121 HOH HOH . K 5 HOH A 7 407 269 HOH HOH . K 5 HOH A 8 408 271 HOH HOH . K 5 HOH A 9 409 91 HOH HOH . K 5 HOH A 10 410 40 HOH HOH . K 5 HOH A 11 411 140 HOH HOH . K 5 HOH A 12 412 255 HOH HOH . K 5 HOH A 13 413 18 HOH HOH . K 5 HOH A 14 414 90 HOH HOH . K 5 HOH A 15 415 137 HOH HOH . K 5 HOH A 16 416 31 HOH HOH . K 5 HOH A 17 417 64 HOH HOH . K 5 HOH A 18 418 232 HOH HOH . K 5 HOH A 19 419 46 HOH HOH . K 5 HOH A 20 420 187 HOH HOH . K 5 HOH A 21 421 146 HOH HOH . K 5 HOH A 22 422 44 HOH HOH . K 5 HOH A 23 423 20 HOH HOH . K 5 HOH A 24 424 166 HOH HOH . K 5 HOH A 25 425 165 HOH HOH . K 5 HOH A 26 426 156 HOH HOH . K 5 HOH A 27 427 136 HOH HOH . K 5 HOH A 28 428 99 HOH HOH . K 5 HOH A 29 429 60 HOH HOH . K 5 HOH A 30 430 235 HOH HOH . K 5 HOH A 31 431 253 HOH HOH . K 5 HOH A 32 432 124 HOH HOH . K 5 HOH A 33 433 102 HOH HOH . K 5 HOH A 34 434 207 HOH HOH . K 5 HOH A 35 435 167 HOH HOH . K 5 HOH A 36 436 81 HOH HOH . K 5 HOH A 37 437 155 HOH HOH . K 5 HOH A 38 438 202 HOH HOH . K 5 HOH A 39 439 57 HOH HOH . K 5 HOH A 40 440 130 HOH HOH . K 5 HOH A 41 441 110 HOH HOH . K 5 HOH A 42 442 41 HOH HOH . K 5 HOH A 43 443 4 HOH HOH . K 5 HOH A 44 444 89 HOH HOH . K 5 HOH A 45 445 126 HOH HOH . K 5 HOH A 46 446 210 HOH HOH . K 5 HOH A 47 447 78 HOH HOH . K 5 HOH A 48 448 144 HOH HOH . K 5 HOH A 49 449 23 HOH HOH . K 5 HOH A 50 450 32 HOH HOH . K 5 HOH A 51 451 69 HOH HOH . K 5 HOH A 52 452 30 HOH HOH . K 5 HOH A 53 453 17 HOH HOH . K 5 HOH A 54 454 109 HOH HOH . K 5 HOH A 55 455 273 HOH HOH . K 5 HOH A 56 456 15 HOH HOH . K 5 HOH A 57 457 22 HOH HOH . K 5 HOH A 58 458 53 HOH HOH . K 5 HOH A 59 459 111 HOH HOH . K 5 HOH A 60 460 208 HOH HOH . K 5 HOH A 61 461 131 HOH HOH . K 5 HOH A 62 462 8 HOH HOH . K 5 HOH A 63 463 219 HOH HOH . K 5 HOH A 64 464 86 HOH HOH . K 5 HOH A 65 465 45 HOH HOH . K 5 HOH A 66 466 54 HOH HOH . K 5 HOH A 67 467 43 HOH HOH . K 5 HOH A 68 468 84 HOH HOH . K 5 HOH A 69 469 158 HOH HOH . K 5 HOH A 70 470 11 HOH HOH . K 5 HOH A 71 471 148 HOH HOH . K 5 HOH A 72 472 34 HOH HOH . K 5 HOH A 73 473 12 HOH HOH . K 5 HOH A 74 474 88 HOH HOH . K 5 HOH A 75 475 117 HOH HOH . K 5 HOH A 76 476 79 HOH HOH . K 5 HOH A 77 477 222 HOH HOH . K 5 HOH A 78 478 272 HOH HOH . K 5 HOH A 79 479 132 HOH HOH . K 5 HOH A 80 480 59 HOH HOH . K 5 HOH A 81 481 2 HOH HOH . K 5 HOH A 82 482 72 HOH HOH . K 5 HOH A 83 483 6 HOH HOH . K 5 HOH A 84 484 129 HOH HOH . K 5 HOH A 85 485 58 HOH HOH . K 5 HOH A 86 486 114 HOH HOH . K 5 HOH A 87 487 157 HOH HOH . K 5 HOH A 88 488 162 HOH HOH . K 5 HOH A 89 489 36 HOH HOH . K 5 HOH A 90 490 142 HOH HOH . K 5 HOH A 91 491 122 HOH HOH . K 5 HOH A 92 492 51 HOH HOH . K 5 HOH A 93 493 174 HOH HOH . K 5 HOH A 94 494 3 HOH HOH . K 5 HOH A 95 495 201 HOH HOH . K 5 HOH A 96 496 16 HOH HOH . K 5 HOH A 97 497 108 HOH HOH . K 5 HOH A 98 498 246 HOH HOH . K 5 HOH A 99 499 238 HOH HOH . K 5 HOH A 100 500 50 HOH HOH . K 5 HOH A 101 501 10 HOH HOH . K 5 HOH A 102 502 138 HOH HOH . K 5 HOH A 103 503 38 HOH HOH . K 5 HOH A 104 504 13 HOH HOH . K 5 HOH A 105 505 175 HOH HOH . K 5 HOH A 106 506 76 HOH HOH . K 5 HOH A 107 507 115 HOH HOH . K 5 HOH A 108 508 263 HOH HOH . K 5 HOH A 109 509 179 HOH HOH . K 5 HOH A 110 510 145 HOH HOH . K 5 HOH A 111 511 73 HOH HOH . K 5 HOH A 112 512 239 HOH HOH . K 5 HOH A 113 513 262 HOH HOH . K 5 HOH A 114 514 184 HOH HOH . K 5 HOH A 115 515 270 HOH HOH . K 5 HOH A 116 516 198 HOH HOH . K 5 HOH A 117 517 203 HOH HOH . K 5 HOH A 118 518 172 HOH HOH . K 5 HOH A 119 519 171 HOH HOH . K 5 HOH A 120 520 220 HOH HOH . K 5 HOH A 121 521 183 HOH HOH . K 5 HOH A 122 522 190 HOH HOH . K 5 HOH A 123 523 252 HOH HOH . K 5 HOH A 124 524 223 HOH HOH . K 5 HOH A 125 525 149 HOH HOH . K 5 HOH A 126 526 213 HOH HOH . K 5 HOH A 127 527 254 HOH HOH . K 5 HOH A 128 528 206 HOH HOH . K 5 HOH A 129 529 237 HOH HOH . K 5 HOH A 130 530 189 HOH HOH . K 5 HOH A 131 531 194 HOH HOH . K 5 HOH A 132 532 227 HOH HOH . K 5 HOH A 133 533 205 HOH HOH . K 5 HOH A 134 534 70 HOH HOH . L 5 HOH B 1 401 200 HOH HOH . L 5 HOH B 2 402 153 HOH HOH . L 5 HOH B 3 403 195 HOH HOH . L 5 HOH B 4 404 118 HOH HOH . L 5 HOH B 5 405 85 HOH HOH . L 5 HOH B 6 406 112 HOH HOH . L 5 HOH B 7 407 67 HOH HOH . L 5 HOH B 8 408 103 HOH HOH . L 5 HOH B 9 409 135 HOH HOH . L 5 HOH B 10 410 258 HOH HOH . L 5 HOH B 11 411 141 HOH HOH . L 5 HOH B 12 412 35 HOH HOH . L 5 HOH B 13 413 225 HOH HOH . L 5 HOH B 14 414 87 HOH HOH . L 5 HOH B 15 415 92 HOH HOH . L 5 HOH B 16 416 100 HOH HOH . L 5 HOH B 17 417 83 HOH HOH . L 5 HOH B 18 418 116 HOH HOH . L 5 HOH B 19 419 27 HOH HOH . L 5 HOH B 20 420 196 HOH HOH . L 5 HOH B 21 421 82 HOH HOH . L 5 HOH B 22 422 143 HOH HOH . L 5 HOH B 23 423 191 HOH HOH . L 5 HOH B 24 424 104 HOH HOH . L 5 HOH B 25 425 247 HOH HOH . L 5 HOH B 26 426 7 HOH HOH . L 5 HOH B 27 427 19 HOH HOH . L 5 HOH B 28 428 65 HOH HOH . L 5 HOH B 29 429 107 HOH HOH . L 5 HOH B 30 430 26 HOH HOH . L 5 HOH B 31 431 33 HOH HOH . L 5 HOH B 32 432 161 HOH HOH . L 5 HOH B 33 433 1 HOH HOH . L 5 HOH B 34 434 147 HOH HOH . L 5 HOH B 35 435 234 HOH HOH . L 5 HOH B 36 436 29 HOH HOH . L 5 HOH B 37 437 48 HOH HOH . L 5 HOH B 38 438 139 HOH HOH . L 5 HOH B 39 439 9 HOH HOH . L 5 HOH B 40 440 52 HOH HOH . L 5 HOH B 41 441 256 HOH HOH . L 5 HOH B 42 442 244 HOH HOH . L 5 HOH B 43 443 217 HOH HOH . L 5 HOH B 44 444 66 HOH HOH . L 5 HOH B 45 445 98 HOH HOH . L 5 HOH B 46 446 240 HOH HOH . L 5 HOH B 47 447 226 HOH HOH . L 5 HOH B 48 448 77 HOH HOH . L 5 HOH B 49 449 74 HOH HOH . L 5 HOH B 50 450 47 HOH HOH . L 5 HOH B 51 451 5 HOH HOH . L 5 HOH B 52 452 25 HOH HOH . L 5 HOH B 53 453 267 HOH HOH . L 5 HOH B 54 454 56 HOH HOH . L 5 HOH B 55 455 28 HOH HOH . L 5 HOH B 56 456 49 HOH HOH . L 5 HOH B 57 457 96 HOH HOH . L 5 HOH B 58 458 127 HOH HOH . L 5 HOH B 59 459 68 HOH HOH . L 5 HOH B 60 460 55 HOH HOH . L 5 HOH B 61 461 75 HOH HOH . L 5 HOH B 62 462 94 HOH HOH . L 5 HOH B 63 463 120 HOH HOH . L 5 HOH B 64 464 97 HOH HOH . L 5 HOH B 65 465 212 HOH HOH . L 5 HOH B 66 466 125 HOH HOH . L 5 HOH B 67 467 80 HOH HOH . L 5 HOH B 68 468 218 HOH HOH . L 5 HOH B 69 469 113 HOH HOH . L 5 HOH B 70 470 177 HOH HOH . L 5 HOH B 71 471 21 HOH HOH . L 5 HOH B 72 472 14 HOH HOH . L 5 HOH B 73 473 221 HOH HOH . L 5 HOH B 74 474 119 HOH HOH . L 5 HOH B 75 475 228 HOH HOH . L 5 HOH B 76 476 151 HOH HOH . L 5 HOH B 77 477 180 HOH HOH . L 5 HOH B 78 478 211 HOH HOH . L 5 HOH B 79 479 123 HOH HOH . L 5 HOH B 80 480 242 HOH HOH . L 5 HOH B 81 481 39 HOH HOH . L 5 HOH B 82 482 61 HOH HOH . L 5 HOH B 83 483 152 HOH HOH . L 5 HOH B 84 484 93 HOH HOH . L 5 HOH B 85 485 265 HOH HOH . L 5 HOH B 86 486 230 HOH HOH . L 5 HOH B 87 487 63 HOH HOH . L 5 HOH B 88 488 229 HOH HOH . L 5 HOH B 89 489 261 HOH HOH . L 5 HOH B 90 490 168 HOH HOH . L 5 HOH B 91 491 163 HOH HOH . L 5 HOH B 92 492 233 HOH HOH . L 5 HOH B 93 493 159 HOH HOH . L 5 HOH B 94 494 150 HOH HOH . L 5 HOH B 95 495 181 HOH HOH . L 5 HOH B 96 496 266 HOH HOH . L 5 HOH B 97 497 236 HOH HOH . L 5 HOH B 98 498 182 HOH HOH . L 5 HOH B 99 499 186 HOH HOH . L 5 HOH B 100 500 259 HOH HOH . L 5 HOH B 101 501 193 HOH HOH . L 5 HOH B 102 502 257 HOH HOH . L 5 HOH B 103 503 224 HOH HOH . L 5 HOH B 104 504 250 HOH HOH . L 5 HOH B 105 505 154 HOH HOH . L 5 HOH B 106 506 260 HOH HOH . L 5 HOH B 107 507 95 HOH HOH . L 5 HOH B 108 508 133 HOH HOH . L 5 HOH B 109 509 128 HOH HOH . L 5 HOH B 110 510 245 HOH HOH . L 5 HOH B 111 511 248 HOH HOH . L 5 HOH B 112 512 178 HOH HOH . L 5 HOH B 113 513 249 HOH HOH . L 5 HOH B 114 514 251 HOH HOH . L 5 HOH B 115 515 204 HOH HOH . L 5 HOH B 116 516 199 HOH HOH . L 5 HOH B 117 517 37 HOH HOH . L 5 HOH B 118 518 105 HOH HOH . L 5 HOH B 119 519 62 HOH HOH . L 5 HOH B 120 520 216 HOH HOH . L 5 HOH B 121 521 264 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 2 _atom_site.Cartn_x 17.498 _atom_site.Cartn_y -38.486 _atom_site.Cartn_z -6.712 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 157.3 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 303 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 23 _model_server_stats.element_count 1 #