data_5R65 # _model_server_result.job_id xHEXsuzzdoofo0bwBNCL7Q _model_server_result.datetime_utc '2024-11-01 15:28:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5r65 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":301}' # _entry.id 5R65 # _exptl.entry_id 5R65 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5R65 _cell.length_a 59.63 _cell.length_b 59.63 _cell.length_c 215.04 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5R65 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,N 1 1,2 B,H,I,J,K,L,M,O 2 1,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 3 'crystal symmetry operation' 6_554 -x,-x+y,-z-1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 -71.68 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 59 A HIS 89 1_555 D ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc2 A NE2 HIS 59 A HIS 89 1_555 H ZN ZN . B ZN 301 3_655 ? ? ? ? ? ? ? ? ? ? ? ? 1.809 ? metalc ? metalc3 A NE2 HIS 63 A HIS 93 1_555 I ZN ZN . B ZN 302 4_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? metalc ? metalc4 N O HOH . A HOH 401 4_545 I ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc5 N O HOH . A HOH 411 2_544 H ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? metalc ? metalc6 B OE1 GLU 58 B GLU 88 1_555 H ZN ZN . B ZN 301 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.837 ? metalc ? metalc7 B NE2 HIS 63 B HIS 93 1_555 H ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.184 ? metalc ? metalc8 B NE1 TRP 119 B TRP 149 1_555 K ZN ZN . B ZN 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.69 ? metalc ? metalc9 B NE2 HIS 134 B HIS 164 1_555 I ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.735 ? metalc ? metalc10 I ZN ZN . B ZN 302 1_555 O O HOH . B HOH 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.687 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5R65 _atom_sites.fract_transf_matrix[1][1] 0.01677 _atom_sites.fract_transf_matrix[1][2] 0.009682 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019364 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00465 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 301 4 ZN ZN . D 2 ZN A 1 302 6 ZN ZN . E 3 ACT A 1 303 1 ACT ACT . F 3 ACT A 1 304 2 ACT ACT . G 4 K0Y A 1 305 1 K0Y LIG . H 2 ZN B 1 301 1 ZN ZN . I 2 ZN B 1 302 2 ZN ZN . J 2 ZN B 1 303 3 ZN ZN . K 2 ZN B 1 304 5 ZN ZN . L 3 ACT B 1 305 3 ACT ACT . M 4 K0Y B 1 306 2 K0Y LIG . N 5 HOH A 1 401 173 HOH HOH . N 5 HOH A 2 402 268 HOH HOH . N 5 HOH A 3 403 253 HOH HOH . N 5 HOH A 4 404 137 HOH HOH . N 5 HOH A 5 405 140 HOH HOH . N 5 HOH A 6 406 46 HOH HOH . N 5 HOH A 7 407 99 HOH HOH . N 5 HOH A 8 408 208 HOH HOH . N 5 HOH A 9 409 132 HOH HOH . N 5 HOH A 10 410 78 HOH HOH . N 5 HOH A 11 411 150 HOH HOH . N 5 HOH A 12 412 32 HOH HOH . N 5 HOH A 13 413 17 HOH HOH . N 5 HOH A 14 414 70 HOH HOH . N 5 HOH A 15 415 41 HOH HOH . N 5 HOH A 16 416 108 HOH HOH . N 5 HOH A 17 417 165 HOH HOH . N 5 HOH A 18 418 20 HOH HOH . N 5 HOH A 19 419 238 HOH HOH . N 5 HOH A 20 420 89 HOH HOH . N 5 HOH A 21 421 134 HOH HOH . N 5 HOH A 22 422 241 HOH HOH . N 5 HOH A 23 423 57 HOH HOH . N 5 HOH A 24 424 235 HOH HOH . N 5 HOH A 25 425 23 HOH HOH . N 5 HOH A 26 426 136 HOH HOH . N 5 HOH A 27 427 255 HOH HOH . N 5 HOH A 28 428 64 HOH HOH . N 5 HOH A 29 429 197 HOH HOH . N 5 HOH A 30 430 22 HOH HOH . N 5 HOH A 31 431 42 HOH HOH . N 5 HOH A 32 432 203 HOH HOH . N 5 HOH A 33 433 2 HOH HOH . N 5 HOH A 34 434 53 HOH HOH . N 5 HOH A 35 435 86 HOH HOH . N 5 HOH A 36 436 54 HOH HOH . N 5 HOH A 37 437 129 HOH HOH . N 5 HOH A 38 438 40 HOH HOH . N 5 HOH A 39 439 126 HOH HOH . N 5 HOH A 40 440 30 HOH HOH . N 5 HOH A 41 441 151 HOH HOH . N 5 HOH A 42 442 91 HOH HOH . N 5 HOH A 43 443 4 HOH HOH . N 5 HOH A 44 444 31 HOH HOH . N 5 HOH A 45 445 58 HOH HOH . N 5 HOH A 46 446 45 HOH HOH . N 5 HOH A 47 447 167 HOH HOH . N 5 HOH A 48 448 69 HOH HOH . N 5 HOH A 49 449 15 HOH HOH . N 5 HOH A 50 450 18 HOH HOH . N 5 HOH A 51 451 16 HOH HOH . N 5 HOH A 52 452 142 HOH HOH . N 5 HOH A 53 453 3 HOH HOH . N 5 HOH A 54 454 8 HOH HOH . N 5 HOH A 55 455 156 HOH HOH . N 5 HOH A 56 456 60 HOH HOH . N 5 HOH A 57 457 166 HOH HOH . N 5 HOH A 58 458 146 HOH HOH . N 5 HOH A 59 459 90 HOH HOH . N 5 HOH A 60 460 207 HOH HOH . N 5 HOH A 61 461 121 HOH HOH . N 5 HOH A 62 462 110 HOH HOH . N 5 HOH A 63 463 148 HOH HOH . N 5 HOH A 64 464 109 HOH HOH . N 5 HOH A 65 465 138 HOH HOH . N 5 HOH A 66 466 6 HOH HOH . N 5 HOH A 67 467 34 HOH HOH . N 5 HOH A 68 468 155 HOH HOH . N 5 HOH A 69 469 111 HOH HOH . N 5 HOH A 70 470 43 HOH HOH . N 5 HOH A 71 471 84 HOH HOH . N 5 HOH A 72 472 12 HOH HOH . N 5 HOH A 73 473 72 HOH HOH . N 5 HOH A 74 474 130 HOH HOH . N 5 HOH A 75 475 10 HOH HOH . N 5 HOH A 76 476 11 HOH HOH . N 5 HOH A 77 477 157 HOH HOH . N 5 HOH A 78 478 124 HOH HOH . N 5 HOH A 79 479 201 HOH HOH . N 5 HOH A 80 480 246 HOH HOH . N 5 HOH A 81 481 76 HOH HOH . N 5 HOH A 82 482 102 HOH HOH . N 5 HOH A 83 483 202 HOH HOH . N 5 HOH A 84 484 210 HOH HOH . N 5 HOH A 85 485 232 HOH HOH . N 5 HOH A 86 486 144 HOH HOH . N 5 HOH A 87 487 239 HOH HOH . N 5 HOH A 88 488 59 HOH HOH . N 5 HOH A 89 489 88 HOH HOH . N 5 HOH A 90 490 24 HOH HOH . N 5 HOH A 91 491 51 HOH HOH . N 5 HOH A 92 492 79 HOH HOH . N 5 HOH A 93 493 44 HOH HOH . N 5 HOH A 94 494 185 HOH HOH . N 5 HOH A 95 495 158 HOH HOH . N 5 HOH A 96 496 101 HOH HOH . N 5 HOH A 97 497 162 HOH HOH . N 5 HOH A 98 498 174 HOH HOH . N 5 HOH A 99 499 38 HOH HOH . N 5 HOH A 100 500 36 HOH HOH . N 5 HOH A 101 501 222 HOH HOH . N 5 HOH A 102 502 115 HOH HOH . N 5 HOH A 103 503 198 HOH HOH . N 5 HOH A 104 504 219 HOH HOH . N 5 HOH A 105 505 179 HOH HOH . N 5 HOH A 106 506 122 HOH HOH . N 5 HOH A 107 507 50 HOH HOH . N 5 HOH A 108 508 175 HOH HOH . N 5 HOH A 109 509 262 HOH HOH . N 5 HOH A 110 510 193 HOH HOH . N 5 HOH A 111 511 13 HOH HOH . N 5 HOH A 112 512 183 HOH HOH . N 5 HOH A 113 513 145 HOH HOH . N 5 HOH A 114 514 114 HOH HOH . N 5 HOH A 115 515 184 HOH HOH . N 5 HOH A 116 516 73 HOH HOH . N 5 HOH A 117 517 81 HOH HOH . N 5 HOH A 118 518 172 HOH HOH . N 5 HOH A 119 519 187 HOH HOH . N 5 HOH A 120 520 213 HOH HOH . N 5 HOH A 121 521 227 HOH HOH . N 5 HOH A 122 522 252 HOH HOH . N 5 HOH A 123 523 206 HOH HOH . N 5 HOH A 124 524 189 HOH HOH . N 5 HOH A 125 525 254 HOH HOH . N 5 HOH A 126 526 149 HOH HOH . N 5 HOH A 127 527 194 HOH HOH . N 5 HOH A 128 528 237 HOH HOH . N 5 HOH A 129 529 263 HOH HOH . O 5 HOH B 1 401 228 HOH HOH . O 5 HOH B 2 402 220 HOH HOH . O 5 HOH B 3 403 195 HOH HOH . O 5 HOH B 4 404 118 HOH HOH . O 5 HOH B 5 405 200 HOH HOH . O 5 HOH B 6 406 65 HOH HOH . O 5 HOH B 7 407 135 HOH HOH . O 5 HOH B 8 408 116 HOH HOH . O 5 HOH B 9 409 82 HOH HOH . O 5 HOH B 10 410 35 HOH HOH . O 5 HOH B 11 411 139 HOH HOH . O 5 HOH B 12 412 161 HOH HOH . O 5 HOH B 13 413 196 HOH HOH . O 5 HOH B 14 414 27 HOH HOH . O 5 HOH B 15 415 100 HOH HOH . O 5 HOH B 16 416 5 HOH HOH . O 5 HOH B 17 417 141 HOH HOH . O 5 HOH B 18 418 191 HOH HOH . O 5 HOH B 19 419 52 HOH HOH . O 5 HOH B 20 420 240 HOH HOH . O 5 HOH B 21 421 1 HOH HOH . O 5 HOH B 22 422 256 HOH HOH . O 5 HOH B 23 423 29 HOH HOH . O 5 HOH B 24 424 49 HOH HOH . O 5 HOH B 25 425 66 HOH HOH . O 5 HOH B 26 426 236 HOH HOH . O 5 HOH B 27 427 143 HOH HOH . O 5 HOH B 28 428 55 HOH HOH . O 5 HOH B 29 429 250 HOH HOH . O 5 HOH B 30 430 258 HOH HOH . O 5 HOH B 31 431 107 HOH HOH . O 5 HOH B 32 432 190 HOH HOH . O 5 HOH B 33 433 19 HOH HOH . O 5 HOH B 34 434 7 HOH HOH . O 5 HOH B 35 435 87 HOH HOH . O 5 HOH B 36 436 26 HOH HOH . O 5 HOH B 37 437 267 HOH HOH . O 5 HOH B 38 438 181 HOH HOH . O 5 HOH B 39 439 103 HOH HOH . O 5 HOH B 40 440 153 HOH HOH . O 5 HOH B 41 441 154 HOH HOH . O 5 HOH B 42 442 25 HOH HOH . O 5 HOH B 43 443 94 HOH HOH . O 5 HOH B 44 444 56 HOH HOH . O 5 HOH B 45 445 221 HOH HOH . O 5 HOH B 46 446 28 HOH HOH . O 5 HOH B 47 447 80 HOH HOH . O 5 HOH B 48 448 178 HOH HOH . O 5 HOH B 49 449 176 HOH HOH . O 5 HOH B 50 450 120 HOH HOH . O 5 HOH B 51 451 9 HOH HOH . O 5 HOH B 52 452 112 HOH HOH . O 5 HOH B 53 453 33 HOH HOH . O 5 HOH B 54 454 47 HOH HOH . O 5 HOH B 55 455 48 HOH HOH . O 5 HOH B 56 456 92 HOH HOH . O 5 HOH B 57 457 128 HOH HOH . O 5 HOH B 58 458 67 HOH HOH . O 5 HOH B 59 459 225 HOH HOH . O 5 HOH B 60 460 119 HOH HOH . O 5 HOH B 61 461 211 HOH HOH . O 5 HOH B 62 462 83 HOH HOH . O 5 HOH B 63 463 215 HOH HOH . O 5 HOH B 64 464 125 HOH HOH . O 5 HOH B 65 465 21 HOH HOH . O 5 HOH B 66 466 61 HOH HOH . O 5 HOH B 67 467 96 HOH HOH . O 5 HOH B 68 468 123 HOH HOH . O 5 HOH B 69 469 14 HOH HOH . O 5 HOH B 70 470 98 HOH HOH . O 5 HOH B 71 471 226 HOH HOH . O 5 HOH B 72 472 159 HOH HOH . O 5 HOH B 73 473 93 HOH HOH . O 5 HOH B 74 474 217 HOH HOH . O 5 HOH B 75 475 75 HOH HOH . O 5 HOH B 76 476 68 HOH HOH . O 5 HOH B 77 477 180 HOH HOH . O 5 HOH B 78 478 163 HOH HOH . O 5 HOH B 79 479 97 HOH HOH . O 5 HOH B 80 480 177 HOH HOH . O 5 HOH B 81 481 218 HOH HOH . O 5 HOH B 82 482 168 HOH HOH . O 5 HOH B 83 483 233 HOH HOH . O 5 HOH B 84 484 127 HOH HOH . O 5 HOH B 85 485 230 HOH HOH . O 5 HOH B 86 486 257 HOH HOH . O 5 HOH B 87 487 74 HOH HOH . O 5 HOH B 88 488 182 HOH HOH . O 5 HOH B 89 489 113 HOH HOH . O 5 HOH B 90 490 266 HOH HOH . O 5 HOH B 91 491 224 HOH HOH . O 5 HOH B 92 492 39 HOH HOH . O 5 HOH B 93 493 247 HOH HOH . O 5 HOH B 94 494 95 HOH HOH . O 5 HOH B 95 495 229 HOH HOH . O 5 HOH B 96 496 186 HOH HOH . O 5 HOH B 97 497 212 HOH HOH . O 5 HOH B 98 498 242 HOH HOH . O 5 HOH B 99 499 261 HOH HOH . O 5 HOH B 100 500 171 HOH HOH . O 5 HOH B 101 501 133 HOH HOH . O 5 HOH B 102 502 223 HOH HOH . O 5 HOH B 103 503 248 HOH HOH . O 5 HOH B 104 504 260 HOH HOH . O 5 HOH B 105 505 265 HOH HOH . O 5 HOH B 106 506 244 HOH HOH . O 5 HOH B 107 507 205 HOH HOH . O 5 HOH B 108 508 204 HOH HOH . O 5 HOH B 109 509 264 HOH HOH . O 5 HOH B 110 510 37 HOH HOH . O 5 HOH B 111 511 199 HOH HOH . O 5 HOH B 112 512 85 HOH HOH . O 5 HOH B 113 513 216 HOH HOH . O 5 HOH B 114 514 249 HOH HOH . O 5 HOH B 115 515 259 HOH HOH . O 5 HOH B 116 516 105 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 2 _atom_site.Cartn_x 31.121 _atom_site.Cartn_y -29.564 _atom_site.Cartn_z -53.348 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 40.57 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 301 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #