data_5R85 # _model_server_result.job_id Xs-pAdCrzKquUAtymxdtTg _model_server_result.datetime_utc '2025-01-22 15:29:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5r85 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 5R85 # _exptl.entry_id 5R85 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 196.17 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3,3,3-tris(fluoranyl)-1-piperazin-1-yl-propan-1-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5R85 _cell.length_a 54.7 _cell.length_b 54.7 _cell.length_c 75.24 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5R85 _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C7 H11 F3 N2 O' _chem_comp.formula_weight 196.17 _chem_comp.id S7A _chem_comp.mon_nstd_flag . _chem_comp.name 3,3,3-tris(fluoranyl)-1-piperazin-1-yl-propan-1-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F2 C S7A sing 277 n n F C S7A sing 278 n n C F1 S7A sing 279 n n C C1 S7A sing 280 n n C1 C2 S7A sing 281 n n O C2 S7A doub 282 n n C2 N S7A sing 283 n n C5 N1 S7A sing 284 n n C5 C6 S7A sing 285 n n N C6 S7A sing 286 n n N C3 S7A sing 287 n n N1 C4 S7A sing 288 n n C4 C3 S7A sing 289 n n N1 H1 S7A sing 290 n n C4 H3 S7A sing 291 n n C4 H4 S7A sing 292 n n C5 H5 S7A sing 293 n n C5 H6 S7A sing 294 n n C6 H7 S7A sing 295 n n C6 H8 S7A sing 296 n n C1 H9 S7A sing 297 n n C1 H10 S7A sing 298 n n C3 H11 S7A sing 299 n n C3 H12 S7A sing 300 n n # _atom_sites.entry_id 5R85 _atom_sites.fract_transf_matrix[1][1] 0.018282 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018282 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013291 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 201 160 SO4 SO4 . C 2 SO4 A 1 202 161 SO4 SO4 . D 3 S7A A 1 203 401 S7A LIG . E 4 HOH A 1 301 214 HOH HOH . E 4 HOH A 2 302 241 HOH HOH . E 4 HOH A 3 303 17 HOH HOH . E 4 HOH A 4 304 326 HOH HOH . E 4 HOH A 5 305 268 HOH HOH . E 4 HOH A 6 306 29 HOH HOH . E 4 HOH A 7 307 247 HOH HOH . E 4 HOH A 8 308 276 HOH HOH . E 4 HOH A 9 309 271 HOH HOH . E 4 HOH A 10 310 287 HOH HOH . E 4 HOH A 11 311 262 HOH HOH . E 4 HOH A 12 312 237 HOH HOH . E 4 HOH A 13 313 267 HOH HOH . E 4 HOH A 14 314 220 HOH HOH . E 4 HOH A 15 315 325 HOH HOH . E 4 HOH A 16 316 203 HOH HOH . E 4 HOH A 17 317 238 HOH HOH . E 4 HOH A 18 318 213 HOH HOH . E 4 HOH A 19 319 34 HOH HOH . E 4 HOH A 20 320 303 HOH HOH . E 4 HOH A 21 321 19 HOH HOH . E 4 HOH A 22 322 208 HOH HOH . E 4 HOH A 23 323 232 HOH HOH . E 4 HOH A 24 324 200 HOH HOH . E 4 HOH A 25 325 211 HOH HOH . E 4 HOH A 26 326 257 HOH HOH . E 4 HOH A 27 327 322 HOH HOH . E 4 HOH A 28 328 209 HOH HOH . E 4 HOH A 29 329 18 HOH HOH . E 4 HOH A 30 330 236 HOH HOH . E 4 HOH A 31 331 204 HOH HOH . E 4 HOH A 32 332 244 HOH HOH . E 4 HOH A 33 333 226 HOH HOH . E 4 HOH A 34 334 28 HOH HOH . E 4 HOH A 35 335 216 HOH HOH . E 4 HOH A 36 336 223 HOH HOH . E 4 HOH A 37 337 334 HOH HOH . E 4 HOH A 38 338 201 HOH HOH . E 4 HOH A 39 339 327 HOH HOH . E 4 HOH A 40 340 235 HOH HOH . E 4 HOH A 41 341 227 HOH HOH . E 4 HOH A 42 342 294 HOH HOH . E 4 HOH A 43 343 202 HOH HOH . E 4 HOH A 44 344 229 HOH HOH . E 4 HOH A 45 345 240 HOH HOH . E 4 HOH A 46 346 218 HOH HOH . E 4 HOH A 47 347 228 HOH HOH . E 4 HOH A 48 348 206 HOH HOH . E 4 HOH A 49 349 269 HOH HOH . E 4 HOH A 50 350 255 HOH HOH . E 4 HOH A 51 351 222 HOH HOH . E 4 HOH A 52 352 215 HOH HOH . E 4 HOH A 53 353 312 HOH HOH . E 4 HOH A 54 354 245 HOH HOH . E 4 HOH A 55 355 338 HOH HOH . E 4 HOH A 56 356 248 HOH HOH . E 4 HOH A 57 357 35 HOH HOH . E 4 HOH A 58 358 246 HOH HOH . E 4 HOH A 59 359 251 HOH HOH . E 4 HOH A 60 360 254 HOH HOH . E 4 HOH A 61 361 321 HOH HOH . E 4 HOH A 62 362 239 HOH HOH . E 4 HOH A 63 363 318 HOH HOH . E 4 HOH A 64 364 348 HOH HOH . E 4 HOH A 65 365 207 HOH HOH . E 4 HOH A 66 366 289 HOH HOH . E 4 HOH A 67 367 313 HOH HOH . E 4 HOH A 68 368 23 HOH HOH . E 4 HOH A 69 369 249 HOH HOH . E 4 HOH A 70 370 346 HOH HOH . E 4 HOH A 71 371 225 HOH HOH . E 4 HOH A 72 372 15 HOH HOH . E 4 HOH A 73 373 345 HOH HOH . E 4 HOH A 74 374 274 HOH HOH . E 4 HOH A 75 375 323 HOH HOH . E 4 HOH A 76 376 233 HOH HOH . E 4 HOH A 77 377 270 HOH HOH . E 4 HOH A 78 378 298 HOH HOH . E 4 HOH A 79 379 333 HOH HOH . E 4 HOH A 80 380 286 HOH HOH . E 4 HOH A 81 381 297 HOH HOH . E 4 HOH A 82 382 21 HOH HOH . E 4 HOH A 83 383 304 HOH HOH . E 4 HOH A 84 384 302 HOH HOH . E 4 HOH A 85 385 221 HOH HOH . E 4 HOH A 86 386 250 HOH HOH . E 4 HOH A 87 387 205 HOH HOH . E 4 HOH A 88 388 266 HOH HOH . E 4 HOH A 89 389 243 HOH HOH . E 4 HOH A 90 390 305 HOH HOH . E 4 HOH A 91 391 31 HOH HOH . E 4 HOH A 92 392 279 HOH HOH . E 4 HOH A 93 393 272 HOH HOH . E 4 HOH A 94 394 242 HOH HOH . E 4 HOH A 95 395 290 HOH HOH . E 4 HOH A 96 396 284 HOH HOH . E 4 HOH A 97 397 224 HOH HOH . E 4 HOH A 98 398 13 HOH HOH . E 4 HOH A 99 399 307 HOH HOH . E 4 HOH A 100 400 212 HOH HOH . E 4 HOH A 101 401 217 HOH HOH . E 4 HOH A 102 402 277 HOH HOH . E 4 HOH A 103 403 12 HOH HOH . E 4 HOH A 104 404 317 HOH HOH . E 4 HOH A 105 405 219 HOH HOH . E 4 HOH A 106 406 285 HOH HOH . E 4 HOH A 107 407 282 HOH HOH . E 4 HOH A 108 408 264 HOH HOH . E 4 HOH A 109 409 234 HOH HOH . E 4 HOH A 110 410 25 HOH HOH . E 4 HOH A 111 411 16 HOH HOH . E 4 HOH A 112 412 258 HOH HOH . E 4 HOH A 113 413 14 HOH HOH . E 4 HOH A 114 414 22 HOH HOH . E 4 HOH A 115 415 253 HOH HOH . E 4 HOH A 116 416 288 HOH HOH . E 4 HOH A 117 417 2 HOH HOH . E 4 HOH A 118 418 347 HOH HOH . E 4 HOH A 119 419 263 HOH HOH . E 4 HOH A 120 420 8 HOH HOH . E 4 HOH A 121 421 256 HOH HOH . E 4 HOH A 122 422 311 HOH HOH . E 4 HOH A 123 423 231 HOH HOH . E 4 HOH A 124 424 11 HOH HOH . E 4 HOH A 125 425 20 HOH HOH . E 4 HOH A 126 426 310 HOH HOH . E 4 HOH A 127 427 319 HOH HOH . E 4 HOH A 128 428 330 HOH HOH . E 4 HOH A 129 429 332 HOH HOH . E 4 HOH A 130 430 5 HOH HOH . E 4 HOH A 131 431 32 HOH HOH . E 4 HOH A 132 432 291 HOH HOH . E 4 HOH A 133 433 260 HOH HOH . E 4 HOH A 134 434 6 HOH HOH . E 4 HOH A 135 435 335 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 S7A . . . D 3 38.646 -0.396 74.68 0.38 28.29 ? N1 S7A 203 A 1 HETATM 2 C C4 S7A . . . D 3 40.03 0.108 74.743 0.38 28.24 ? C4 S7A 203 A 1 HETATM 3 C C5 S7A . . . D 3 37.675 0.579 74.125 0.38 27.17 ? C5 S7A 203 A 1 HETATM 4 C C6 S7A . . . D 3 37.748 1.95 74.784 0.38 26.59 ? C6 S7A 203 A 1 HETATM 5 N N S7A . . . D 3 39.133 2.409 74.655 0.38 25.97 ? N S7A 203 A 1 HETATM 6 C C S7A . . . D 3 39.086 5.132 72.005 0.38 23.28 ? C S7A 203 A 1 HETATM 7 O O S7A . . . D 3 40.706 3.711 73.671 0.38 20.8 ? O S7A 203 A 1 HETATM 8 C C1 S7A . . . D 3 38.442 4.138 73.006 0.38 23.49 ? C1 S7A 203 A 1 HETATM 9 C C2 S7A . . . D 3 39.526 3.419 73.787 0.38 23.68 ? C2 S7A 203 A 1 HETATM 10 C C3 S7A . . . D 3 40.101 1.53 75.344 0.38 27.97 ? C3 S7A 203 A 1 HETATM 11 F F S7A . . . D 3 38.211 5.716 71.231 0.38 21.86 ? F S7A 203 A 1 HETATM 12 F F1 S7A . . . D 3 39.818 6.116 72.548 0.38 25.46 ? F1 S7A 203 A 1 HETATM 13 F F2 S7A . . . D 3 39.914 4.543 71.172 0.38 22.25 ? F2 S7A 203 A 1 # _model_server_stats.io_time_ms 40 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 13 #