data_5R8J
#
_model_server_result.job_id            sIDxlNzteR5_FR8Hgfqs3A 
_model_server_result.datetime_utc      '2024-11-16 08:37:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5r8j 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":203}' 
#
_entry.id    5R8J 
#
_exptl.entry_id    5R8J 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              200.278 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-[(2~{R},5~{S})-2,5-dimethylmorpholin-4-yl]-~{N}-ethyl-ethanamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5R8J 
_cell.length_a            54.6 
_cell.length_b            54.6 
_cell.length_c            75.3 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5R8J 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        78 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 43' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C10 H20 N2 O2' 
_chem_comp.formula_weight    200.278 
_chem_comp.id                S8D 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-[(2~{R},5~{S})-2,5-dimethylmorpholin-4-yl]-~{N}-ethyl-ethanamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C C1 S8D sing 277 n n 
C1 N S8D sing 278 n n 
C5 C6 S8D sing 279 n n 
C5 O1 S8D sing 280 n n 
C5 C4 S8D sing 281 n n 
C7 O1 S8D sing 282 n n 
C7 C8 S8D sing 283 n n 
N1 C4 S8D sing 284 n n 
N1 C8 S8D sing 285 n n 
N1 C3 S8D sing 286 n n 
N C2 S8D sing 287 n n 
C9 C8 S8D sing 288 n n 
C3 C2 S8D sing 289 n n 
C2 O S8D doub 290 n n 
C4 H2 S8D sing 291 n n 
C4 H3 S8D sing 292 n n 
C5 H4 S8D sing 293 n n 
C6 H5 S8D sing 294 n n 
C6 H6 S8D sing 295 n n 
C6 H7 S8D sing 296 n n 
C7 H8 S8D sing 297 n n 
C7 H9 S8D sing 298 n n 
C8 H10 S8D sing 299 n n 
N H11 S8D sing 300 n n 
C H12 S8D sing 301 n n 
C H13 S8D sing 302 n n 
C H14 S8D sing 303 n n 
C1 H15 S8D sing 304 n n 
C1 H16 S8D sing 305 n n 
C3 H17 S8D sing 306 n n 
C3 H18 S8D sing 307 n n 
C9 H19 S8D sing 308 n n 
C9 H20 S8D sing 309 n n 
C9 H21 S8D sing 310 n n 
#
_atom_sites.entry_id                     5R8J 
_atom_sites.fract_transf_matrix[1][1]    0.018315 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018315 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01328 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 201 160 SO4 SO4 . 
C 2 SO4 A 1 202 161 SO4 SO4 . 
D 3 S8D A 1 203 401 S8D LIG . 
E 4 HOH A 1 301 214 HOH HOH . 
E 4 HOH A 2 302 17 HOH HOH . 
E 4 HOH A 3 303 29 HOH HOH . 
E 4 HOH A 4 304 257 HOH HOH . 
E 4 HOH A 5 305 262 HOH HOH . 
E 4 HOH A 6 306 276 HOH HOH . 
E 4 HOH A 7 307 300 HOH HOH . 
E 4 HOH A 8 308 303 HOH HOH . 
E 4 HOH A 9 309 322 HOH HOH . 
E 4 HOH A 10 310 240 HOH HOH . 
E 4 HOH A 11 311 294 HOH HOH . 
E 4 HOH A 12 312 200 HOH HOH . 
E 4 HOH A 13 313 343 HOH HOH . 
E 4 HOH A 14 314 203 HOH HOH . 
E 4 HOH A 15 315 287 HOH HOH . 
E 4 HOH A 16 316 208 HOH HOH . 
E 4 HOH A 17 317 267 HOH HOH . 
E 4 HOH A 18 318 213 HOH HOH . 
E 4 HOH A 19 319 238 HOH HOH . 
E 4 HOH A 20 320 226 HOH HOH . 
E 4 HOH A 21 321 325 HOH HOH . 
E 4 HOH A 22 322 227 HOH HOH . 
E 4 HOH A 23 323 334 HOH HOH . 
E 4 HOH A 24 324 239 HOH HOH . 
E 4 HOH A 25 325 211 HOH HOH . 
E 4 HOH A 26 326 209 HOH HOH . 
E 4 HOH A 27 327 204 HOH HOH . 
E 4 HOH A 28 328 201 HOH HOH . 
E 4 HOH A 29 329 229 HOH HOH . 
E 4 HOH A 30 330 216 HOH HOH . 
E 4 HOH A 31 331 223 HOH HOH . 
E 4 HOH A 32 332 251 HOH HOH . 
E 4 HOH A 33 333 23 HOH HOH . 
E 4 HOH A 34 334 312 HOH HOH . 
E 4 HOH A 35 335 323 HOH HOH . 
E 4 HOH A 36 336 245 HOH HOH . 
E 4 HOH A 37 337 235 HOH HOH . 
E 4 HOH A 38 338 289 HOH HOH . 
E 4 HOH A 39 339 206 HOH HOH . 
E 4 HOH A 40 340 228 HOH HOH . 
E 4 HOH A 41 341 218 HOH HOH . 
E 4 HOH A 42 342 304 HOH HOH . 
E 4 HOH A 43 343 255 HOH HOH . 
E 4 HOH A 44 344 327 HOH HOH . 
E 4 HOH A 45 345 222 HOH HOH . 
E 4 HOH A 46 346 248 HOH HOH . 
E 4 HOH A 47 347 286 HOH HOH . 
E 4 HOH A 48 348 212 HOH HOH . 
E 4 HOH A 49 349 346 HOH HOH . 
E 4 HOH A 50 350 202 HOH HOH . 
E 4 HOH A 51 351 321 HOH HOH . 
E 4 HOH A 52 352 250 HOH HOH . 
E 4 HOH A 53 353 246 HOH HOH . 
E 4 HOH A 54 354 254 HOH HOH . 
E 4 HOH A 55 355 207 HOH HOH . 
E 4 HOH A 56 356 298 HOH HOH . 
E 4 HOH A 57 357 242 HOH HOH . 
E 4 HOH A 58 358 290 HOH HOH . 
E 4 HOH A 59 359 205 HOH HOH . 
E 4 HOH A 60 360 243 HOH HOH . 
E 4 HOH A 61 361 284 HOH HOH . 
E 4 HOH A 62 362 215 HOH HOH . 
E 4 HOH A 63 363 221 HOH HOH . 
E 4 HOH A 64 364 225 HOH HOH . 
E 4 HOH A 65 365 305 HOH HOH . 
E 4 HOH A 66 366 270 HOH HOH . 
E 4 HOH A 67 367 279 HOH HOH . 
E 4 HOH A 68 368 266 HOH HOH . 
E 4 HOH A 69 369 285 HOH HOH . 
E 4 HOH A 70 370 224 HOH HOH . 
E 4 HOH A 71 371 277 HOH HOH . 
E 4 HOH A 72 372 219 HOH HOH . 
E 4 HOH A 73 373 217 HOH HOH . 
E 4 HOH A 74 374 282 HOH HOH . 
E 4 HOH A 75 375 12 HOH HOH . 
E 4 HOH A 76 376 268 HOH HOH . 
E 4 HOH A 77 377 31 HOH HOH . 
E 4 HOH A 78 378 302 HOH HOH . 
E 4 HOH A 79 379 27 HOH HOH . 
E 4 HOH A 80 380 253 HOH HOH . 
E 4 HOH A 81 381 16 HOH HOH . 
E 4 HOH A 82 382 258 HOH HOH . 
E 4 HOH A 83 383 35 HOH HOH . 
E 4 HOH A 84 384 256 HOH HOH . 
E 4 HOH A 85 385 231 HOH HOH . 
E 4 HOH A 86 386 11 HOH HOH . 
E 4 HOH A 87 387 2 HOH HOH . 
E 4 HOH A 88 388 337 HOH HOH . 
E 4 HOH A 89 389 5 HOH HOH . 
E 4 HOH A 90 390 32 HOH HOH . 
E 4 HOH A 91 391 291 HOH HOH . 
E 4 HOH A 92 392 260 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 S8D . . . D 3 49.683 5.548 62.781 0.33 35.76 ? N1 S8D 203 A 1 
HETATM 2 C C4 S8D . . . D 3 48.174 5.641 62.949 0.33 35.13 ? C4 S8D 203 A 1 
HETATM 3 C C5 S8D . . . D 3 47.663 6.896 62.159 0.33 34.56 ? C5 S8D 203 A 1 
HETATM 4 C C6 S8D . . . D 3 46.158 7.081 62.271 0.33 34.11 ? C6 S8D 203 A 1 
HETATM 5 C C7 S8D . . . D 3 49.739 7.989 62.383 0.33 33.73 ? C7 S8D 203 A 1 
HETATM 6 C C8 S8D . . . D 3 50.361 6.822 63.182 0.33 35.17 ? C8 S8D 203 A 1 
HETATM 7 N N S8D . . . D 3 48.948 2.369 62.789 0.33 41.67 ? N S8D 203 A 1 
HETATM 8 C C S8D . . . D 3 48.906 1.248 60.571 0.33 41.08 ? C S8D 203 A 1 
HETATM 9 O O S8D . . . D 3 48.946 3.136 64.9 0.33 45.08 ? O S8D 203 A 1 
HETATM 10 C C1 S8D . . . D 3 49.397 2.449 61.395 0.33 41.79 ? C1 S8D 203 A 1 
HETATM 11 C C2 S8D . . . D 3 49.38 3.239 63.771 0.33 41.12 ? C2 S8D 203 A 1 
HETATM 12 C C3 S8D . . . D 3 50.395 4.349 63.411 0.33 38.81 ? C3 S8D 203 A 1 
HETATM 13 C C9 S8D . . . D 3 51.876 6.834 62.959 0.33 35.57 ? C9 S8D 203 A 1 
HETATM 14 O O1 S8D . . . D 3 48.353 8.042 62.58 0.33 34.2 ? O1 S8D 203 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           335 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           14 
#