data_5R8O # _model_server_result.job_id kNhBfrHwY_FfxA2r5WYGvw _model_server_result.datetime_utc '2024-11-22 05:12:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5r8o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 5R8O # _exptl.entry_id 5R8O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 226.295 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-methyl-~{N}-[[(2~{S})-oxolan-2-yl]methyl]-1,2-thiazole-3-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5R8O _cell.length_a 54.54 _cell.length_b 54.54 _cell.length_c 75.28 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5R8O _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H14 N2 O2 S' _chem_comp.formula_weight 226.295 _chem_comp.id S8P _chem_comp.mon_nstd_flag . _chem_comp.name 5-methyl-~{N}-[[(2~{S})-oxolan-2-yl]methyl]-1,2-thiazole-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C9 C8 S8P sing 277 n n C9 O1 S8P sing 278 n n C8 C7 S8P sing 279 n n O1 C6 S8P sing 280 n n C7 C6 S8P sing 281 n n C6 C5 S8P sing 282 n n C5 N1 S8P sing 283 n n N1 C4 S8P sing 284 n n C4 O S8P doub 285 n n C4 C3 S8P sing 286 n n N C3 S8P doub 287 n y N S S8P sing 288 n y C3 C2 S8P sing 289 n y S C1 S8P sing 290 n y C2 C1 S8P doub 291 n y C1 C S8P sing 292 n n N1 H1 S8P sing 293 n n C5 H2 S8P sing 294 n n C5 H3 S8P sing 295 n n C6 H4 S8P sing 296 n n C7 H5 S8P sing 297 n n C7 H6 S8P sing 298 n n C8 H7 S8P sing 299 n n C8 H8 S8P sing 300 n n C H9 S8P sing 301 n n C H10 S8P sing 302 n n C H11 S8P sing 303 n n C2 H12 S8P sing 304 n n C9 H13 S8P sing 305 n n C9 H14 S8P sing 306 n n # _atom_sites.entry_id 5R8O _atom_sites.fract_transf_matrix[1][1] 0.018335 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018335 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013284 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 201 160 SO4 SO4 . C 2 SO4 A 1 202 161 SO4 SO4 . D 3 S8P A 1 203 401 S8P LIG . E 4 HOH A 1 301 241 HOH HOH . E 4 HOH A 2 302 300 HOH HOH . E 4 HOH A 3 303 247 HOH HOH . E 4 HOH A 4 304 268 HOH HOH . E 4 HOH A 5 305 271 HOH HOH . E 4 HOH A 6 306 29 HOH HOH . E 4 HOH A 7 307 326 HOH HOH . E 4 HOH A 8 308 34 HOH HOH . E 4 HOH A 9 309 262 HOH HOH . E 4 HOH A 10 310 214 HOH HOH . E 4 HOH A 11 311 216 HOH HOH . E 4 HOH A 12 312 213 HOH HOH . E 4 HOH A 13 313 325 HOH HOH . E 4 HOH A 14 314 322 HOH HOH . E 4 HOH A 15 315 237 HOH HOH . E 4 HOH A 16 316 303 HOH HOH . E 4 HOH A 17 317 19 HOH HOH . E 4 HOH A 18 318 203 HOH HOH . E 4 HOH A 19 319 267 HOH HOH . E 4 HOH A 20 320 208 HOH HOH . E 4 HOH A 21 321 257 HOH HOH . E 4 HOH A 22 322 200 HOH HOH . E 4 HOH A 23 323 28 HOH HOH . E 4 HOH A 24 324 232 HOH HOH . E 4 HOH A 25 325 18 HOH HOH . E 4 HOH A 26 326 220 HOH HOH . E 4 HOH A 27 327 226 HOH HOH . E 4 HOH A 28 328 211 HOH HOH . E 4 HOH A 29 329 204 HOH HOH . E 4 HOH A 30 330 238 HOH HOH . E 4 HOH A 31 331 334 HOH HOH . E 4 HOH A 32 332 201 HOH HOH . E 4 HOH A 33 333 240 HOH HOH . E 4 HOH A 34 334 244 HOH HOH . E 4 HOH A 35 335 209 HOH HOH . E 4 HOH A 36 336 218 HOH HOH . E 4 HOH A 37 337 294 HOH HOH . E 4 HOH A 38 338 223 HOH HOH . E 4 HOH A 39 339 246 HOH HOH . E 4 HOH A 40 340 202 HOH HOH . E 4 HOH A 41 341 229 HOH HOH . E 4 HOH A 42 342 228 HOH HOH . E 4 HOH A 43 343 235 HOH HOH . E 4 HOH A 44 344 251 HOH HOH . E 4 HOH A 45 345 215 HOH HOH . E 4 HOH A 46 346 331 HOH HOH . E 4 HOH A 47 347 312 HOH HOH . E 4 HOH A 48 348 245 HOH HOH . E 4 HOH A 49 349 327 HOH HOH . E 4 HOH A 50 350 206 HOH HOH . E 4 HOH A 51 351 222 HOH HOH . E 4 HOH A 52 352 239 HOH HOH . E 4 HOH A 53 353 21 HOH HOH . E 4 HOH A 54 354 338 HOH HOH . E 4 HOH A 55 355 248 HOH HOH . E 4 HOH A 56 356 321 HOH HOH . E 4 HOH A 57 357 346 HOH HOH . E 4 HOH A 58 358 255 HOH HOH . E 4 HOH A 59 359 254 HOH HOH . E 4 HOH A 60 360 207 HOH HOH . E 4 HOH A 61 361 348 HOH HOH . E 4 HOH A 62 362 23 HOH HOH . E 4 HOH A 63 363 233 HOH HOH . E 4 HOH A 64 364 308 HOH HOH . E 4 HOH A 65 365 225 HOH HOH . E 4 HOH A 66 366 274 HOH HOH . E 4 HOH A 67 367 289 HOH HOH . E 4 HOH A 68 368 323 HOH HOH . E 4 HOH A 69 369 250 HOH HOH . E 4 HOH A 70 370 286 HOH HOH . E 4 HOH A 71 371 345 HOH HOH . E 4 HOH A 72 372 270 HOH HOH . E 4 HOH A 73 373 297 HOH HOH . E 4 HOH A 74 374 305 HOH HOH . E 4 HOH A 75 375 205 HOH HOH . E 4 HOH A 76 376 302 HOH HOH . E 4 HOH A 77 377 224 HOH HOH . E 4 HOH A 78 378 290 HOH HOH . E 4 HOH A 79 379 221 HOH HOH . E 4 HOH A 80 380 12 HOH HOH . E 4 HOH A 81 381 280 HOH HOH . E 4 HOH A 82 382 217 HOH HOH . E 4 HOH A 83 383 35 HOH HOH . E 4 HOH A 84 384 266 HOH HOH . E 4 HOH A 85 385 307 HOH HOH . E 4 HOH A 86 386 242 HOH HOH . E 4 HOH A 87 387 15 HOH HOH . E 4 HOH A 88 388 317 HOH HOH . E 4 HOH A 89 389 298 HOH HOH . E 4 HOH A 90 390 279 HOH HOH . E 4 HOH A 91 391 277 HOH HOH . E 4 HOH A 92 392 304 HOH HOH . E 4 HOH A 93 393 212 HOH HOH . E 4 HOH A 94 394 219 HOH HOH . E 4 HOH A 95 395 264 HOH HOH . E 4 HOH A 96 396 284 HOH HOH . E 4 HOH A 97 397 282 HOH HOH . E 4 HOH A 98 398 285 HOH HOH . E 4 HOH A 99 399 25 HOH HOH . E 4 HOH A 100 400 31 HOH HOH . E 4 HOH A 101 401 258 HOH HOH . E 4 HOH A 102 402 16 HOH HOH . E 4 HOH A 103 403 22 HOH HOH . E 4 HOH A 104 404 253 HOH HOH . E 4 HOH A 105 405 2 HOH HOH . E 4 HOH A 106 406 311 HOH HOH . E 4 HOH A 107 407 347 HOH HOH . E 4 HOH A 108 408 316 HOH HOH . E 4 HOH A 109 409 256 HOH HOH . E 4 HOH A 110 410 340 HOH HOH . E 4 HOH A 111 411 231 HOH HOH . E 4 HOH A 112 412 11 HOH HOH . E 4 HOH A 113 413 319 HOH HOH . E 4 HOH A 114 414 20 HOH HOH . E 4 HOH A 115 415 310 HOH HOH . E 4 HOH A 116 416 32 HOH HOH . E 4 HOH A 117 417 26 HOH HOH . E 4 HOH A 118 418 260 HOH HOH . E 4 HOH A 119 419 335 HOH HOH . E 4 HOH A 120 420 299 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 S8P . . . D 3 41.248 3.301 75.003 0.32 32.38 ? N1 S8P 203 A 1 HETATM 2 C C4 S8P . . . D 3 41.535 2.091 75.631 0.32 36.12 ? C4 S8P 203 A 1 HETATM 3 C C5 S8P . . . D 3 39.866 3.595 74.61 0.32 32.01 ? C5 S8P 203 A 1 HETATM 4 C C6 S8P . . . D 3 39.822 4.756 73.601 0.32 30.09 ? C6 S8P 203 A 1 HETATM 5 C C7 S8P . . . D 3 38.405 5.212 73.261 0.32 28.66 ? C7 S8P 203 A 1 HETATM 6 C C8 S8P . . . D 3 38.506 5.503 71.772 0.32 27.64 ? C8 S8P 203 A 1 HETATM 7 N N S8P . . . D 3 43.951 2.684 75.907 0.32 39.24 ? N S8P 203 A 1 HETATM 8 C C S8P . . . D 3 45.311 -0.709 77.41 0.32 39.83 ? C S8P 203 A 1 HETATM 9 O O S8P . . . D 3 40.676 1.25 75.87 0.32 34.17 ? O S8P 203 A 1 HETATM 10 C C1 S8P . . . D 3 44.618 0.458 76.844 0.32 39.5 ? C1 S8P 203 A 1 HETATM 11 C C2 S8P . . . D 3 43.295 0.519 76.558 0.32 39.1 ? C2 S8P 203 A 1 HETATM 12 C C3 S8P . . . D 3 42.948 1.816 76.019 0.32 37.8 ? C3 S8P 203 A 1 HETATM 13 C C9 S8P . . . D 3 39.518 4.491 71.325 0.32 27.23 ? C9 S8P 203 A 1 HETATM 14 O O1 S8P . . . D 3 40.363 4.237 72.437 0.32 26.93 ? O1 S8P 203 A 1 HETATM 15 S S S8P . . . D 3 45.388 1.953 76.456 0.32 40.97 ? S S8P 203 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 15 #