data_5R9A # _model_server_result.job_id egvih-rjrAnjw1uaeJTzbA _model_server_result.datetime_utc '2024-11-16 07:46:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5r9a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":409}' # _entry.id 5R9A # _exptl.entry_id 5R9A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5R9A _cell.length_a 45.6 _cell.length_b 86.39 _cell.length_c 125.64 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5R9A _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id J _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 155 A ASN 155 1_555 J MG MG . A MG 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.151 ? metalc ? metalc2 A OD2 ASP 168 A ASP 168 1_555 J MG MG . A MG 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? metalc ? metalc3 J MG MG . A MG 409 1_555 N O HOH . A HOH 521 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc4 J MG MG . A MG 409 1_555 N O HOH . A HOH 575 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc5 J MG MG . A MG 409 1_555 N O HOH . A HOH 579 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc6 J MG MG . A MG 409 1_555 N O HOH . A HOH 580 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.135 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5R9A _atom_sites.fract_transf_matrix[1][1] 0.02193 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011575 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007959 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SQM A 1 401 401 SQM LIG . C 3 CL A 1 402 3 CL CL . D 3 CL A 1 403 4 CL CL . E 3 CL A 1 404 5 CL CL . F 3 CL A 1 405 6 CL CL . G 3 CL A 1 406 7 CL CL . H 3 CL A 1 407 8 CL CL . I 3 CL A 1 408 9 CL CL . J 4 MG A 1 409 1 MG MG . K 5 SO4 A 1 410 1 SO4 SO4 . L 5 SO4 A 1 411 2 SO4 SO4 . M 6 GOL A 1 412 2 GOL GOL . N 7 HOH A 1 501 131 HOH HOH . N 7 HOH A 2 502 264 HOH HOH . N 7 HOH A 3 503 256 HOH HOH . N 7 HOH A 4 504 77 HOH HOH . N 7 HOH A 5 505 136 HOH HOH . N 7 HOH A 6 506 168 HOH HOH . N 7 HOH A 7 507 266 HOH HOH . N 7 HOH A 8 508 214 HOH HOH . N 7 HOH A 9 509 109 HOH HOH . N 7 HOH A 10 510 123 HOH HOH . N 7 HOH A 11 511 12 HOH HOH . N 7 HOH A 12 512 50 HOH HOH . N 7 HOH A 13 513 13 HOH HOH . N 7 HOH A 14 514 18 HOH HOH . N 7 HOH A 15 515 229 HOH HOH . N 7 HOH A 16 516 69 HOH HOH . N 7 HOH A 17 517 63 HOH HOH . N 7 HOH A 18 518 274 HOH HOH . N 7 HOH A 19 519 26 HOH HOH . N 7 HOH A 20 520 251 HOH HOH . N 7 HOH A 21 521 171 HOH HOH . N 7 HOH A 22 522 6 HOH HOH . N 7 HOH A 23 523 213 HOH HOH . N 7 HOH A 24 524 149 HOH HOH . N 7 HOH A 25 525 281 HOH HOH . N 7 HOH A 26 526 205 HOH HOH . N 7 HOH A 27 527 204 HOH HOH . N 7 HOH A 28 528 3 HOH HOH . N 7 HOH A 29 529 58 HOH HOH . N 7 HOH A 30 530 59 HOH HOH . N 7 HOH A 31 531 118 HOH HOH . N 7 HOH A 32 532 43 HOH HOH . N 7 HOH A 33 533 200 HOH HOH . N 7 HOH A 34 534 235 HOH HOH . N 7 HOH A 35 535 180 HOH HOH . N 7 HOH A 36 536 10 HOH HOH . N 7 HOH A 37 537 95 HOH HOH . N 7 HOH A 38 538 117 HOH HOH . N 7 HOH A 39 539 270 HOH HOH . N 7 HOH A 40 540 199 HOH HOH . N 7 HOH A 41 541 61 HOH HOH . N 7 HOH A 42 542 83 HOH HOH . N 7 HOH A 43 543 135 HOH HOH . N 7 HOH A 44 544 233 HOH HOH . N 7 HOH A 45 545 152 HOH HOH . N 7 HOH A 46 546 128 HOH HOH . N 7 HOH A 47 547 217 HOH HOH . N 7 HOH A 48 548 182 HOH HOH . N 7 HOH A 49 549 81 HOH HOH . N 7 HOH A 50 550 144 HOH HOH . N 7 HOH A 51 551 139 HOH HOH . N 7 HOH A 52 552 35 HOH HOH . N 7 HOH A 53 553 23 HOH HOH . N 7 HOH A 54 554 112 HOH HOH . N 7 HOH A 55 555 86 HOH HOH . N 7 HOH A 56 556 46 HOH HOH . N 7 HOH A 57 557 78 HOH HOH . N 7 HOH A 58 558 37 HOH HOH . N 7 HOH A 59 559 236 HOH HOH . N 7 HOH A 60 560 96 HOH HOH . N 7 HOH A 61 561 57 HOH HOH . N 7 HOH A 62 562 19 HOH HOH . N 7 HOH A 63 563 207 HOH HOH . N 7 HOH A 64 564 31 HOH HOH . N 7 HOH A 65 565 129 HOH HOH . N 7 HOH A 66 566 132 HOH HOH . N 7 HOH A 67 567 249 HOH HOH . N 7 HOH A 68 568 94 HOH HOH . N 7 HOH A 69 569 276 HOH HOH . N 7 HOH A 70 570 151 HOH HOH . N 7 HOH A 71 571 64 HOH HOH . N 7 HOH A 72 572 279 HOH HOH . N 7 HOH A 73 573 22 HOH HOH . N 7 HOH A 74 574 282 HOH HOH . N 7 HOH A 75 575 173 HOH HOH . N 7 HOH A 76 576 277 HOH HOH . N 7 HOH A 77 577 133 HOH HOH . N 7 HOH A 78 578 74 HOH HOH . N 7 HOH A 79 579 172 HOH HOH . N 7 HOH A 80 580 228 HOH HOH . N 7 HOH A 81 581 221 HOH HOH . N 7 HOH A 82 582 87 HOH HOH . N 7 HOH A 83 583 92 HOH HOH . N 7 HOH A 84 584 216 HOH HOH . N 7 HOH A 85 585 1 HOH HOH . N 7 HOH A 86 586 90 HOH HOH . N 7 HOH A 87 587 72 HOH HOH . N 7 HOH A 88 588 120 HOH HOH . N 7 HOH A 89 589 119 HOH HOH . N 7 HOH A 90 590 56 HOH HOH . N 7 HOH A 91 591 280 HOH HOH . N 7 HOH A 92 592 47 HOH HOH . N 7 HOH A 93 593 8 HOH HOH . N 7 HOH A 94 594 284 HOH HOH . N 7 HOH A 95 595 36 HOH HOH . N 7 HOH A 96 596 105 HOH HOH . N 7 HOH A 97 597 39 HOH HOH . N 7 HOH A 98 598 269 HOH HOH . N 7 HOH A 99 599 48 HOH HOH . N 7 HOH A 100 600 210 HOH HOH . N 7 HOH A 101 601 2 HOH HOH . N 7 HOH A 102 602 125 HOH HOH . N 7 HOH A 103 603 41 HOH HOH . N 7 HOH A 104 604 222 HOH HOH . N 7 HOH A 105 605 145 HOH HOH . N 7 HOH A 106 606 49 HOH HOH . N 7 HOH A 107 607 246 HOH HOH . N 7 HOH A 108 608 42 HOH HOH . N 7 HOH A 109 609 181 HOH HOH . N 7 HOH A 110 610 267 HOH HOH . N 7 HOH A 111 611 108 HOH HOH . N 7 HOH A 112 612 51 HOH HOH . N 7 HOH A 113 613 44 HOH HOH . N 7 HOH A 114 614 107 HOH HOH . N 7 HOH A 115 615 4 HOH HOH . N 7 HOH A 116 616 215 HOH HOH . N 7 HOH A 117 617 29 HOH HOH . N 7 HOH A 118 618 143 HOH HOH . N 7 HOH A 119 619 196 HOH HOH . N 7 HOH A 120 620 185 HOH HOH . N 7 HOH A 121 621 76 HOH HOH . N 7 HOH A 122 622 175 HOH HOH . N 7 HOH A 123 623 288 HOH HOH . N 7 HOH A 124 624 206 HOH HOH . N 7 HOH A 125 625 164 HOH HOH . N 7 HOH A 126 626 176 HOH HOH . N 7 HOH A 127 627 223 HOH HOH . N 7 HOH A 128 628 27 HOH HOH . N 7 HOH A 129 629 7 HOH HOH . N 7 HOH A 130 630 155 HOH HOH . N 7 HOH A 131 631 184 HOH HOH . N 7 HOH A 132 632 91 HOH HOH . N 7 HOH A 133 633 102 HOH HOH . N 7 HOH A 134 634 24 HOH HOH . N 7 HOH A 135 635 231 HOH HOH . N 7 HOH A 136 636 70 HOH HOH . N 7 HOH A 137 637 124 HOH HOH . N 7 HOH A 138 638 85 HOH HOH . N 7 HOH A 139 639 278 HOH HOH . N 7 HOH A 140 640 174 HOH HOH . N 7 HOH A 141 641 165 HOH HOH . N 7 HOH A 142 642 9 HOH HOH . N 7 HOH A 143 643 146 HOH HOH . N 7 HOH A 144 644 250 HOH HOH . N 7 HOH A 145 645 252 HOH HOH . N 7 HOH A 146 646 183 HOH HOH . N 7 HOH A 147 647 62 HOH HOH . N 7 HOH A 148 648 203 HOH HOH . N 7 HOH A 149 649 103 HOH HOH . N 7 HOH A 150 650 5 HOH HOH . N 7 HOH A 151 651 52 HOH HOH . N 7 HOH A 152 652 25 HOH HOH . N 7 HOH A 153 653 241 HOH HOH . N 7 HOH A 154 654 73 HOH HOH . N 7 HOH A 155 655 68 HOH HOH . N 7 HOH A 156 656 283 HOH HOH . N 7 HOH A 157 657 54 HOH HOH . N 7 HOH A 158 658 201 HOH HOH . N 7 HOH A 159 659 101 HOH HOH . N 7 HOH A 160 660 40 HOH HOH . N 7 HOH A 161 661 195 HOH HOH . N 7 HOH A 162 662 66 HOH HOH . N 7 HOH A 163 663 32 HOH HOH . N 7 HOH A 164 664 106 HOH HOH . N 7 HOH A 165 665 104 HOH HOH . N 7 HOH A 166 666 242 HOH HOH . N 7 HOH A 167 667 16 HOH HOH . N 7 HOH A 168 668 38 HOH HOH . N 7 HOH A 169 669 60 HOH HOH . N 7 HOH A 170 670 218 HOH HOH . N 7 HOH A 171 671 226 HOH HOH . N 7 HOH A 172 672 99 HOH HOH . N 7 HOH A 173 673 138 HOH HOH . N 7 HOH A 174 674 30 HOH HOH . N 7 HOH A 175 675 110 HOH HOH . N 7 HOH A 176 676 28 HOH HOH . N 7 HOH A 177 677 273 HOH HOH . N 7 HOH A 178 678 150 HOH HOH . N 7 HOH A 179 679 111 HOH HOH . N 7 HOH A 180 680 134 HOH HOH . N 7 HOH A 181 681 140 HOH HOH . N 7 HOH A 182 682 142 HOH HOH . N 7 HOH A 183 683 88 HOH HOH . N 7 HOH A 184 684 209 HOH HOH . N 7 HOH A 185 685 93 HOH HOH . N 7 HOH A 186 686 157 HOH HOH . N 7 HOH A 187 687 116 HOH HOH . N 7 HOH A 188 688 169 HOH HOH . N 7 HOH A 189 689 34 HOH HOH . N 7 HOH A 190 690 211 HOH HOH . N 7 HOH A 191 691 15 HOH HOH . N 7 HOH A 192 692 253 HOH HOH . N 7 HOH A 193 693 14 HOH HOH . N 7 HOH A 194 694 45 HOH HOH . N 7 HOH A 195 695 122 HOH HOH . N 7 HOH A 196 696 154 HOH HOH . N 7 HOH A 197 697 285 HOH HOH . N 7 HOH A 198 698 100 HOH HOH . N 7 HOH A 199 699 212 HOH HOH . N 7 HOH A 200 700 208 HOH HOH . N 7 HOH A 201 701 53 HOH HOH . N 7 HOH A 202 702 11 HOH HOH . N 7 HOH A 203 703 80 HOH HOH . N 7 HOH A 204 704 244 HOH HOH . N 7 HOH A 205 705 97 HOH HOH . N 7 HOH A 206 706 194 HOH HOH . N 7 HOH A 207 707 179 HOH HOH . N 7 HOH A 208 708 21 HOH HOH . N 7 HOH A 209 709 271 HOH HOH . N 7 HOH A 210 710 20 HOH HOH . N 7 HOH A 211 711 248 HOH HOH . N 7 HOH A 212 712 167 HOH HOH . N 7 HOH A 213 713 230 HOH HOH . N 7 HOH A 214 714 286 HOH HOH . N 7 HOH A 215 715 148 HOH HOH . N 7 HOH A 216 716 263 HOH HOH . N 7 HOH A 217 717 262 HOH HOH . N 7 HOH A 218 718 227 HOH HOH . N 7 HOH A 219 719 186 HOH HOH . N 7 HOH A 220 720 159 HOH HOH . N 7 HOH A 221 721 197 HOH HOH . N 7 HOH A 222 722 160 HOH HOH . N 7 HOH A 223 723 178 HOH HOH . N 7 HOH A 224 724 192 HOH HOH . N 7 HOH A 225 725 290 HOH HOH . N 7 HOH A 226 726 98 HOH HOH . N 7 HOH A 227 727 275 HOH HOH . N 7 HOH A 228 728 255 HOH HOH . N 7 HOH A 229 729 188 HOH HOH . N 7 HOH A 230 730 287 HOH HOH . N 7 HOH A 231 731 163 HOH HOH . N 7 HOH A 232 732 65 HOH HOH . N 7 HOH A 233 733 153 HOH HOH . N 7 HOH A 234 734 272 HOH HOH . N 7 HOH A 235 735 224 HOH HOH . N 7 HOH A 236 736 156 HOH HOH . N 7 HOH A 237 737 187 HOH HOH . N 7 HOH A 238 738 265 HOH HOH . N 7 HOH A 239 739 247 HOH HOH . N 7 HOH A 240 740 67 HOH HOH . N 7 HOH A 241 741 259 HOH HOH . N 7 HOH A 242 742 89 HOH HOH . N 7 HOH A 243 743 162 HOH HOH . N 7 HOH A 244 744 258 HOH HOH . N 7 HOH A 245 745 193 HOH HOH . N 7 HOH A 246 746 161 HOH HOH . N 7 HOH A 247 747 289 HOH HOH . N 7 HOH A 248 748 239 HOH HOH . N 7 HOH A 249 749 71 HOH HOH . N 7 HOH A 250 750 114 HOH HOH . N 7 HOH A 251 751 191 HOH HOH . N 7 HOH A 252 752 225 HOH HOH . N 7 HOH A 253 753 202 HOH HOH . N 7 HOH A 254 754 17 HOH HOH . N 7 HOH A 255 755 189 HOH HOH . N 7 HOH A 256 756 79 HOH HOH . N 7 HOH A 257 757 137 HOH HOH . N 7 HOH A 258 758 170 HOH HOH . N 7 HOH A 259 759 257 HOH HOH . N 7 HOH A 260 760 75 HOH HOH . N 7 HOH A 261 761 177 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 4 _atom_site.Cartn_x 43.029 _atom_site.Cartn_y 112.022 _atom_site.Cartn_z 28.802 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 34.16 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 409 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #