data_5R9D # _model_server_result.job_id cZMlENlFQtyN4JDHw42DFw _model_server_result.datetime_utc '2024-11-13 05:53:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5r9d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":409}' # _entry.id 5R9D # _exptl.entry_id 5R9D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5R9D _cell.length_a 45.62 _cell.length_b 86.04 _cell.length_c 127.64 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5R9D _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 I N N ? 5 J N N ? 5 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 155 A ASN 155 1_555 H MG MG . A MG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? metalc ? metalc2 A OD2 ASP 168 A ASP 168 1_555 H MG MG . A MG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? metalc ? metalc3 H MG MG . A MG 407 1_555 L O HOH . A HOH 515 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.212 ? metalc ? metalc4 H MG MG . A MG 407 1_555 L O HOH . A HOH 578 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? metalc ? metalc5 H MG MG . A MG 407 1_555 L O HOH . A HOH 642 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? metalc ? metalc6 H MG MG . A MG 407 1_555 L O HOH . A HOH 685 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 311 n n S O2 SO4 doub 312 n n S O3 SO4 sing 313 n n S O4 SO4 sing 314 n n # _atom_sites.entry_id 5R9D _atom_sites.fract_transf_matrix[1][1] 0.02192 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011623 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007835 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 N9J A 1 401 401 N9J LIG . C 3 CL A 1 402 3 CL CL . D 3 CL A 1 403 4 CL CL . E 3 CL A 1 404 6 CL CL . F 3 CL A 1 405 7 CL CL . G 3 CL A 1 406 8 CL CL . H 4 MG A 1 407 1 MG MG . I 5 SO4 A 1 408 1 SO4 SO4 . J 5 SO4 A 1 409 2 SO4 SO4 . K 5 SO4 A 1 410 3 SO4 SO4 . L 6 HOH A 1 501 157 HOH HOH . L 6 HOH A 2 502 169 HOH HOH . L 6 HOH A 3 503 103 HOH HOH . L 6 HOH A 4 504 91 HOH HOH . L 6 HOH A 5 505 18 HOH HOH . L 6 HOH A 6 506 109 HOH HOH . L 6 HOH A 7 507 210 HOH HOH . L 6 HOH A 8 508 193 HOH HOH . L 6 HOH A 9 509 71 HOH HOH . L 6 HOH A 10 510 126 HOH HOH . L 6 HOH A 11 511 259 HOH HOH . L 6 HOH A 12 512 13 HOH HOH . L 6 HOH A 13 513 75 HOH HOH . L 6 HOH A 14 514 12 HOH HOH . L 6 HOH A 15 515 160 HOH HOH . L 6 HOH A 16 516 116 HOH HOH . L 6 HOH A 17 517 112 HOH HOH . L 6 HOH A 18 518 135 HOH HOH . L 6 HOH A 19 519 4 HOH HOH . L 6 HOH A 20 520 221 HOH HOH . L 6 HOH A 21 521 212 HOH HOH . L 6 HOH A 22 522 231 HOH HOH . L 6 HOH A 23 523 57 HOH HOH . L 6 HOH A 24 524 30 HOH HOH . L 6 HOH A 25 525 191 HOH HOH . L 6 HOH A 26 526 48 HOH HOH . L 6 HOH A 27 527 233 HOH HOH . L 6 HOH A 28 528 243 HOH HOH . L 6 HOH A 29 529 248 HOH HOH . L 6 HOH A 30 530 220 HOH HOH . L 6 HOH A 31 531 3 HOH HOH . L 6 HOH A 32 532 223 HOH HOH . L 6 HOH A 33 533 46 HOH HOH . L 6 HOH A 34 534 234 HOH HOH . L 6 HOH A 35 535 82 HOH HOH . L 6 HOH A 36 536 55 HOH HOH . L 6 HOH A 37 537 50 HOH HOH . L 6 HOH A 38 538 10 HOH HOH . L 6 HOH A 39 539 33 HOH HOH . L 6 HOH A 40 540 133 HOH HOH . L 6 HOH A 41 541 41 HOH HOH . L 6 HOH A 42 542 97 HOH HOH . L 6 HOH A 43 543 120 HOH HOH . L 6 HOH A 44 544 9 HOH HOH . L 6 HOH A 45 545 49 HOH HOH . L 6 HOH A 46 546 196 HOH HOH . L 6 HOH A 47 547 218 HOH HOH . L 6 HOH A 48 548 35 HOH HOH . L 6 HOH A 49 549 125 HOH HOH . L 6 HOH A 50 550 113 HOH HOH . L 6 HOH A 51 551 134 HOH HOH . L 6 HOH A 52 552 214 HOH HOH . L 6 HOH A 53 553 51 HOH HOH . L 6 HOH A 54 554 79 HOH HOH . L 6 HOH A 55 555 43 HOH HOH . L 6 HOH A 56 556 137 HOH HOH . L 6 HOH A 57 557 263 HOH HOH . L 6 HOH A 58 558 222 HOH HOH . L 6 HOH A 59 559 211 HOH HOH . L 6 HOH A 60 560 249 HOH HOH . L 6 HOH A 61 561 213 HOH HOH . L 6 HOH A 62 562 54 HOH HOH . L 6 HOH A 63 563 80 HOH HOH . L 6 HOH A 64 564 96 HOH HOH . L 6 HOH A 65 565 58 HOH HOH . L 6 HOH A 66 566 81 HOH HOH . L 6 HOH A 67 567 38 HOH HOH . L 6 HOH A 68 568 1 HOH HOH . L 6 HOH A 69 569 184 HOH HOH . L 6 HOH A 70 570 22 HOH HOH . L 6 HOH A 71 571 5 HOH HOH . L 6 HOH A 72 572 23 HOH HOH . L 6 HOH A 73 573 142 HOH HOH . L 6 HOH A 74 574 240 HOH HOH . L 6 HOH A 75 575 67 HOH HOH . L 6 HOH A 76 576 235 HOH HOH . L 6 HOH A 77 577 208 HOH HOH . L 6 HOH A 78 578 162 HOH HOH . L 6 HOH A 79 579 192 HOH HOH . L 6 HOH A 80 580 185 HOH HOH . L 6 HOH A 81 581 99 HOH HOH . L 6 HOH A 82 582 111 HOH HOH . L 6 HOH A 83 583 171 HOH HOH . L 6 HOH A 84 584 261 HOH HOH . L 6 HOH A 85 585 246 HOH HOH . L 6 HOH A 86 586 165 HOH HOH . L 6 HOH A 87 587 72 HOH HOH . L 6 HOH A 88 588 88 HOH HOH . L 6 HOH A 89 589 186 HOH HOH . L 6 HOH A 90 590 121 HOH HOH . L 6 HOH A 91 591 37 HOH HOH . L 6 HOH A 92 592 207 HOH HOH . L 6 HOH A 93 593 89 HOH HOH . L 6 HOH A 94 594 45 HOH HOH . L 6 HOH A 95 595 60 HOH HOH . L 6 HOH A 96 596 90 HOH HOH . L 6 HOH A 97 597 64 HOH HOH . L 6 HOH A 98 598 203 HOH HOH . L 6 HOH A 99 599 61 HOH HOH . L 6 HOH A 100 600 40 HOH HOH . L 6 HOH A 101 601 2 HOH HOH . L 6 HOH A 102 602 163 HOH HOH . L 6 HOH A 103 603 19 HOH HOH . L 6 HOH A 104 604 232 HOH HOH . L 6 HOH A 105 605 39 HOH HOH . L 6 HOH A 106 606 85 HOH HOH . L 6 HOH A 107 607 219 HOH HOH . L 6 HOH A 108 608 83 HOH HOH . L 6 HOH A 109 609 8 HOH HOH . L 6 HOH A 110 610 141 HOH HOH . L 6 HOH A 111 611 56 HOH HOH . L 6 HOH A 112 612 119 HOH HOH . L 6 HOH A 113 613 24 HOH HOH . L 6 HOH A 114 614 170 HOH HOH . L 6 HOH A 115 615 74 HOH HOH . L 6 HOH A 116 616 26 HOH HOH . L 6 HOH A 117 617 122 HOH HOH . L 6 HOH A 118 618 76 HOH HOH . L 6 HOH A 119 619 86 HOH HOH . L 6 HOH A 120 620 70 HOH HOH . L 6 HOH A 121 621 209 HOH HOH . L 6 HOH A 122 622 25 HOH HOH . L 6 HOH A 123 623 129 HOH HOH . L 6 HOH A 124 624 52 HOH HOH . L 6 HOH A 125 625 62 HOH HOH . L 6 HOH A 126 626 92 HOH HOH . L 6 HOH A 127 627 102 HOH HOH . L 6 HOH A 128 628 87 HOH HOH . L 6 HOH A 129 629 216 HOH HOH . L 6 HOH A 130 630 114 HOH HOH . L 6 HOH A 131 631 145 HOH HOH . L 6 HOH A 132 632 31 HOH HOH . L 6 HOH A 133 633 139 HOH HOH . L 6 HOH A 134 634 148 HOH HOH . L 6 HOH A 135 635 6 HOH HOH . L 6 HOH A 136 636 53 HOH HOH . L 6 HOH A 137 637 164 HOH HOH . L 6 HOH A 138 638 128 HOH HOH . L 6 HOH A 139 639 123 HOH HOH . L 6 HOH A 140 640 32 HOH HOH . L 6 HOH A 141 641 247 HOH HOH . L 6 HOH A 142 642 161 HOH HOH . L 6 HOH A 143 643 183 HOH HOH . L 6 HOH A 144 644 155 HOH HOH . L 6 HOH A 145 645 101 HOH HOH . L 6 HOH A 146 646 124 HOH HOH . L 6 HOH A 147 647 172 HOH HOH . L 6 HOH A 148 648 239 HOH HOH . L 6 HOH A 149 649 28 HOH HOH . L 6 HOH A 150 650 118 HOH HOH . L 6 HOH A 151 651 78 HOH HOH . L 6 HOH A 152 652 225 HOH HOH . L 6 HOH A 153 653 217 HOH HOH . L 6 HOH A 154 654 95 HOH HOH . L 6 HOH A 155 655 94 HOH HOH . L 6 HOH A 156 656 117 HOH HOH . L 6 HOH A 157 657 173 HOH HOH . L 6 HOH A 158 658 224 HOH HOH . L 6 HOH A 159 659 93 HOH HOH . L 6 HOH A 160 660 105 HOH HOH . L 6 HOH A 161 661 27 HOH HOH . L 6 HOH A 162 662 100 HOH HOH . L 6 HOH A 163 663 258 HOH HOH . L 6 HOH A 164 664 136 HOH HOH . L 6 HOH A 165 665 206 HOH HOH . L 6 HOH A 166 666 205 HOH HOH . L 6 HOH A 167 667 29 HOH HOH . L 6 HOH A 168 668 200 HOH HOH . L 6 HOH A 169 669 11 HOH HOH . L 6 HOH A 170 670 16 HOH HOH . L 6 HOH A 171 671 110 HOH HOH . L 6 HOH A 172 672 154 HOH HOH . L 6 HOH A 173 673 7 HOH HOH . L 6 HOH A 174 674 106 HOH HOH . L 6 HOH A 175 675 36 HOH HOH . L 6 HOH A 176 676 215 HOH HOH . L 6 HOH A 177 677 190 HOH HOH . L 6 HOH A 178 678 140 HOH HOH . L 6 HOH A 179 679 115 HOH HOH . L 6 HOH A 180 680 181 HOH HOH . L 6 HOH A 181 681 68 HOH HOH . L 6 HOH A 182 682 147 HOH HOH . L 6 HOH A 183 683 236 HOH HOH . L 6 HOH A 184 684 59 HOH HOH . L 6 HOH A 185 685 230 HOH HOH . L 6 HOH A 186 686 132 HOH HOH . L 6 HOH A 187 687 44 HOH HOH . L 6 HOH A 188 688 227 HOH HOH . L 6 HOH A 189 689 158 HOH HOH . L 6 HOH A 190 690 66 HOH HOH . L 6 HOH A 191 691 199 HOH HOH . L 6 HOH A 192 692 17 HOH HOH . L 6 HOH A 193 693 107 HOH HOH . L 6 HOH A 194 694 15 HOH HOH . L 6 HOH A 195 695 47 HOH HOH . L 6 HOH A 196 696 156 HOH HOH . L 6 HOH A 197 697 14 HOH HOH . L 6 HOH A 198 698 130 HOH HOH . L 6 HOH A 199 699 98 HOH HOH . L 6 HOH A 200 700 228 HOH HOH . L 6 HOH A 201 701 34 HOH HOH . L 6 HOH A 202 702 42 HOH HOH . L 6 HOH A 203 703 180 HOH HOH . L 6 HOH A 204 704 245 HOH HOH . L 6 HOH A 205 705 182 HOH HOH . L 6 HOH A 206 706 104 HOH HOH . L 6 HOH A 207 707 226 HOH HOH . L 6 HOH A 208 708 138 HOH HOH . L 6 HOH A 209 709 257 HOH HOH . L 6 HOH A 210 710 238 HOH HOH . L 6 HOH A 211 711 197 HOH HOH . L 6 HOH A 212 712 144 HOH HOH . L 6 HOH A 213 713 168 HOH HOH . L 6 HOH A 214 714 21 HOH HOH . L 6 HOH A 215 715 194 HOH HOH . L 6 HOH A 216 716 174 HOH HOH . L 6 HOH A 217 717 179 HOH HOH . L 6 HOH A 218 718 167 HOH HOH . L 6 HOH A 219 719 149 HOH HOH . L 6 HOH A 220 720 20 HOH HOH . L 6 HOH A 221 721 178 HOH HOH . L 6 HOH A 222 722 241 HOH HOH . L 6 HOH A 223 723 229 HOH HOH . L 6 HOH A 224 724 153 HOH HOH . L 6 HOH A 225 725 146 HOH HOH . L 6 HOH A 226 726 260 HOH HOH . L 6 HOH A 227 727 188 HOH HOH . L 6 HOH A 228 728 251 HOH HOH . L 6 HOH A 229 729 256 HOH HOH . L 6 HOH A 230 730 65 HOH HOH . L 6 HOH A 231 731 195 HOH HOH . L 6 HOH A 232 732 198 HOH HOH . L 6 HOH A 233 733 143 HOH HOH . L 6 HOH A 234 734 175 HOH HOH . L 6 HOH A 235 735 262 HOH HOH . L 6 HOH A 236 736 63 HOH HOH . L 6 HOH A 237 737 255 HOH HOH . L 6 HOH A 238 738 150 HOH HOH . L 6 HOH A 239 739 84 HOH HOH . L 6 HOH A 240 740 177 HOH HOH . L 6 HOH A 241 741 176 HOH HOH . L 6 HOH A 242 742 108 HOH HOH . L 6 HOH A 243 743 201 HOH HOH . L 6 HOH A 244 744 152 HOH HOH . L 6 HOH A 245 745 189 HOH HOH . L 6 HOH A 246 746 69 HOH HOH . L 6 HOH A 247 747 254 HOH HOH . L 6 HOH A 248 748 77 HOH HOH . L 6 HOH A 249 749 244 HOH HOH . L 6 HOH A 250 750 187 HOH HOH . L 6 HOH A 251 751 151 HOH HOH . L 6 HOH A 252 752 252 HOH HOH . L 6 HOH A 253 753 202 HOH HOH . L 6 HOH A 254 754 159 HOH HOH . L 6 HOH A 255 755 237 HOH HOH . L 6 HOH A 256 756 166 HOH HOH . L 6 HOH A 257 757 253 HOH HOH . L 6 HOH A 258 758 131 HOH HOH . L 6 HOH A 259 759 242 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . J 5 42.379 107.578 30.04 0.71 51.16 ? S SO4 409 A 1 HETATM 2 O O1 SO4 . . . J 5 42.946 107.736 28.698 0.71 36.26 ? O1 SO4 409 A 1 HETATM 3 O O2 SO4 . . . J 5 41.073 108.233 30.09 0.71 45.68 ? O2 SO4 409 A 1 HETATM 4 O O3 SO4 . . . J 5 43.27 108.184 31.029 0.71 46.17 ? O3 SO4 409 A 1 HETATM 5 O O4 SO4 . . . J 5 42.219 106.154 30.339 0.71 48.23 ? O4 SO4 409 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #