data_5R9G # _model_server_result.job_id 17bJ9m2UjqRwTMBLTeXOfg _model_server_result.datetime_utc '2024-10-10 06:31:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5r9g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":407}' # _entry.id 5R9G # _exptl.entry_id 5R9G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5R9G _cell.length_a 45.906 _cell.length_b 85.941 _cell.length_c 127.518 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5R9G _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 155 A ASN 155 1_555 H MG MG . A MG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? metalc ? metalc2 A OD2 ASP 168 A ASP 168 1_555 H MG MG . A MG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? metalc ? metalc3 H MG MG . A MG 407 1_555 K O HOH . A HOH 564 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? metalc ? metalc4 H MG MG . A MG 407 1_555 K O HOH . A HOH 651 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc5 H MG MG . A MG 407 1_555 K O HOH . A HOH 668 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc6 H MG MG . A MG 407 1_555 K O HOH . A HOH 687 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.946 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5R9G _atom_sites.fract_transf_matrix[1][1] 0.021784 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011636 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007842 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 RGY A 1 401 401 RGY LIG . C 3 CL A 1 402 3 CL CL . D 3 CL A 1 403 4 CL CL . E 3 CL A 1 404 5 CL CL . F 3 CL A 1 405 6 CL CL . G 3 CL A 1 406 7 CL CL . H 4 MG A 1 407 1 MG MG . I 5 SO4 A 1 408 1 SO4 SO4 . J 6 DMS A 1 409 1 DMS DMS . K 7 HOH A 1 501 422 HOH HOH . K 7 HOH A 2 502 95 HOH HOH . K 7 HOH A 3 503 480 HOH HOH . K 7 HOH A 4 504 100 HOH HOH . K 7 HOH A 5 505 506 HOH HOH . K 7 HOH A 6 506 21 HOH HOH . K 7 HOH A 7 507 43 HOH HOH . K 7 HOH A 8 508 168 HOH HOH . K 7 HOH A 9 509 19 HOH HOH . K 7 HOH A 10 510 64 HOH HOH . K 7 HOH A 11 511 38 HOH HOH . K 7 HOH A 12 512 273 HOH HOH . K 7 HOH A 13 513 138 HOH HOH . K 7 HOH A 14 514 77 HOH HOH . K 7 HOH A 15 515 107 HOH HOH . K 7 HOH A 16 516 16 HOH HOH . K 7 HOH A 17 517 25 HOH HOH . K 7 HOH A 18 518 90 HOH HOH . K 7 HOH A 19 519 300 HOH HOH . K 7 HOH A 20 520 152 HOH HOH . K 7 HOH A 21 521 22 HOH HOH . K 7 HOH A 22 522 117 HOH HOH . K 7 HOH A 23 523 122 HOH HOH . K 7 HOH A 24 524 44 HOH HOH . K 7 HOH A 25 525 24 HOH HOH . K 7 HOH A 26 526 71 HOH HOH . K 7 HOH A 27 527 177 HOH HOH . K 7 HOH A 28 528 64 HOH HOH . K 7 HOH A 29 529 5 HOH HOH . K 7 HOH A 30 530 14 HOH HOH . K 7 HOH A 31 531 63 HOH HOH . K 7 HOH A 32 532 60 HOH HOH . K 7 HOH A 33 533 237 HOH HOH . K 7 HOH A 34 534 159 HOH HOH . K 7 HOH A 35 535 239 HOH HOH . K 7 HOH A 36 536 165 HOH HOH . K 7 HOH A 37 537 68 HOH HOH . K 7 HOH A 38 538 178 HOH HOH . K 7 HOH A 39 539 160 HOH HOH . K 7 HOH A 40 540 6 HOH HOH . K 7 HOH A 41 541 236 HOH HOH . K 7 HOH A 42 542 29 HOH HOH . K 7 HOH A 43 543 56 HOH HOH . K 7 HOH A 44 544 3 HOH HOH . K 7 HOH A 45 545 33 HOH HOH . K 7 HOH A 46 546 103 HOH HOH . K 7 HOH A 47 547 504 HOH HOH . K 7 HOH A 48 548 166 HOH HOH . K 7 HOH A 49 549 29 HOH HOH . K 7 HOH A 50 550 201 HOH HOH . K 7 HOH A 51 551 298 HOH HOH . K 7 HOH A 52 552 46 HOH HOH . K 7 HOH A 53 553 79 HOH HOH . K 7 HOH A 54 554 180 HOH HOH . K 7 HOH A 55 555 99 HOH HOH . K 7 HOH A 56 556 136 HOH HOH . K 7 HOH A 57 557 507 HOH HOH . K 7 HOH A 58 558 42 HOH HOH . K 7 HOH A 59 559 72 HOH HOH . K 7 HOH A 60 560 15 HOH HOH . K 7 HOH A 61 561 140 HOH HOH . K 7 HOH A 62 562 123 HOH HOH . K 7 HOH A 63 563 17 HOH HOH . K 7 HOH A 64 564 472 HOH HOH . K 7 HOH A 65 565 15 HOH HOH . K 7 HOH A 66 566 484 HOH HOH . K 7 HOH A 67 567 114 HOH HOH . K 7 HOH A 68 568 254 HOH HOH . K 7 HOH A 69 569 50 HOH HOH . K 7 HOH A 70 570 133 HOH HOH . K 7 HOH A 71 571 74 HOH HOH . K 7 HOH A 72 572 70 HOH HOH . K 7 HOH A 73 573 67 HOH HOH . K 7 HOH A 74 574 58 HOH HOH . K 7 HOH A 75 575 9 HOH HOH . K 7 HOH A 76 576 89 HOH HOH . K 7 HOH A 77 577 144 HOH HOH . K 7 HOH A 78 578 409 HOH HOH . K 7 HOH A 79 579 2 HOH HOH . K 7 HOH A 80 580 175 HOH HOH . K 7 HOH A 81 581 91 HOH HOH . K 7 HOH A 82 582 2 HOH HOH . K 7 HOH A 83 583 52 HOH HOH . K 7 HOH A 84 584 187 HOH HOH . K 7 HOH A 85 585 96 HOH HOH . K 7 HOH A 86 586 508 HOH HOH . K 7 HOH A 87 587 59 HOH HOH . K 7 HOH A 88 588 2 HOH HOH . K 7 HOH A 89 589 47 HOH HOH . K 7 HOH A 90 590 55 HOH HOH . K 7 HOH A 91 591 49 HOH HOH . K 7 HOH A 92 592 194 HOH HOH . K 7 HOH A 93 593 120 HOH HOH . K 7 HOH A 94 594 1 HOH HOH . K 7 HOH A 95 595 474 HOH HOH . K 7 HOH A 96 596 69 HOH HOH . K 7 HOH A 97 597 30 HOH HOH . K 7 HOH A 98 598 26 HOH HOH . K 7 HOH A 99 599 24 HOH HOH . K 7 HOH A 100 600 119 HOH HOH . K 7 HOH A 101 601 192 HOH HOH . K 7 HOH A 102 602 116 HOH HOH . K 7 HOH A 103 603 475 HOH HOH . K 7 HOH A 104 604 108 HOH HOH . K 7 HOH A 105 605 207 HOH HOH . K 7 HOH A 106 606 12 HOH HOH . K 7 HOH A 107 607 115 HOH HOH . K 7 HOH A 108 608 9 HOH HOH . K 7 HOH A 109 609 76 HOH HOH . K 7 HOH A 110 610 132 HOH HOH . K 7 HOH A 111 611 51 HOH HOH . K 7 HOH A 112 612 482 HOH HOH . K 7 HOH A 113 613 172 HOH HOH . K 7 HOH A 114 614 39 HOH HOH . K 7 HOH A 115 615 13 HOH HOH . K 7 HOH A 116 616 121 HOH HOH . K 7 HOH A 117 617 209 HOH HOH . K 7 HOH A 118 618 476 HOH HOH . K 7 HOH A 119 619 12 HOH HOH . K 7 HOH A 120 620 93 HOH HOH . K 7 HOH A 121 621 75 HOH HOH . K 7 HOH A 122 622 46 HOH HOH . K 7 HOH A 123 623 244 HOH HOH . K 7 HOH A 124 624 62 HOH HOH . K 7 HOH A 125 625 23 HOH HOH . K 7 HOH A 126 626 37 HOH HOH . K 7 HOH A 127 627 34 HOH HOH . K 7 HOH A 128 628 11 HOH HOH . K 7 HOH A 129 629 44 HOH HOH . K 7 HOH A 130 630 7 HOH HOH . K 7 HOH A 131 631 134 HOH HOH . K 7 HOH A 132 632 85 HOH HOH . K 7 HOH A 133 633 41 HOH HOH . K 7 HOH A 134 634 65 HOH HOH . K 7 HOH A 135 635 486 HOH HOH . K 7 HOH A 136 636 33 HOH HOH . K 7 HOH A 137 637 117 HOH HOH . K 7 HOH A 138 638 20 HOH HOH . K 7 HOH A 139 639 48 HOH HOH . K 7 HOH A 140 640 174 HOH HOH . K 7 HOH A 141 641 513 HOH HOH . K 7 HOH A 142 642 417 HOH HOH . K 7 HOH A 143 643 22 HOH HOH . K 7 HOH A 144 644 86 HOH HOH . K 7 HOH A 145 645 502 HOH HOH . K 7 HOH A 146 646 6 HOH HOH . K 7 HOH A 147 647 509 HOH HOH . K 7 HOH A 148 648 390 HOH HOH . K 7 HOH A 149 649 105 HOH HOH . K 7 HOH A 150 650 129 HOH HOH . K 7 HOH A 151 651 471 HOH HOH . K 7 HOH A 152 652 111 HOH HOH . K 7 HOH A 153 653 52 HOH HOH . K 7 HOH A 154 654 32 HOH HOH . K 7 HOH A 155 655 45 HOH HOH . K 7 HOH A 156 656 127 HOH HOH . K 7 HOH A 157 657 155 HOH HOH . K 7 HOH A 158 658 84 HOH HOH . K 7 HOH A 159 659 210 HOH HOH . K 7 HOH A 160 660 135 HOH HOH . K 7 HOH A 161 661 73 HOH HOH . K 7 HOH A 162 662 31 HOH HOH . K 7 HOH A 163 663 7 HOH HOH . K 7 HOH A 164 664 183 HOH HOH . K 7 HOH A 165 665 36 HOH HOH . K 7 HOH A 166 666 125 HOH HOH . K 7 HOH A 167 667 23 HOH HOH . K 7 HOH A 168 668 42 HOH HOH . K 7 HOH A 169 669 23 HOH HOH . K 7 HOH A 170 670 86 HOH HOH . K 7 HOH A 171 671 512 HOH HOH . K 7 HOH A 172 672 481 HOH HOH . K 7 HOH A 173 673 511 HOH HOH . K 7 HOH A 174 674 3 HOH HOH . K 7 HOH A 175 675 283 HOH HOH . K 7 HOH A 176 676 8 HOH HOH . K 7 HOH A 177 677 43 HOH HOH . K 7 HOH A 178 678 311 HOH HOH . K 7 HOH A 179 679 126 HOH HOH . K 7 HOH A 180 680 193 HOH HOH . K 7 HOH A 181 681 416 HOH HOH . K 7 HOH A 182 682 145 HOH HOH . K 7 HOH A 183 683 21 HOH HOH . K 7 HOH A 184 684 59 HOH HOH . K 7 HOH A 185 685 406 HOH HOH . K 7 HOH A 186 686 30 HOH HOH . K 7 HOH A 187 687 470 HOH HOH . K 7 HOH A 188 688 505 HOH HOH . K 7 HOH A 189 689 139 HOH HOH . K 7 HOH A 190 690 15 HOH HOH . K 7 HOH A 191 691 71 HOH HOH . K 7 HOH A 192 692 37 HOH HOH . K 7 HOH A 193 693 18 HOH HOH . K 7 HOH A 194 694 137 HOH HOH . K 7 HOH A 195 695 98 HOH HOH . K 7 HOH A 196 696 66 HOH HOH . K 7 HOH A 197 697 152 HOH HOH . K 7 HOH A 198 698 5 HOH HOH . K 7 HOH A 199 699 228 HOH HOH . K 7 HOH A 200 700 55 HOH HOH . K 7 HOH A 201 701 20 HOH HOH . K 7 HOH A 202 702 35 HOH HOH . K 7 HOH A 203 703 112 HOH HOH . K 7 HOH A 204 704 18 HOH HOH . K 7 HOH A 205 705 141 HOH HOH . K 7 HOH A 206 706 8 HOH HOH . K 7 HOH A 207 707 421 HOH HOH . K 7 HOH A 208 708 37 HOH HOH . K 7 HOH A 209 709 171 HOH HOH . K 7 HOH A 210 710 68 HOH HOH . K 7 HOH A 211 711 34 HOH HOH . K 7 HOH A 212 712 267 HOH HOH . K 7 HOH A 213 713 35 HOH HOH . K 7 HOH A 214 714 80 HOH HOH . K 7 HOH A 215 715 426 HOH HOH . K 7 HOH A 216 716 1 HOH HOH . K 7 HOH A 217 717 226 HOH HOH . K 7 HOH A 218 718 40 HOH HOH . K 7 HOH A 219 719 42 HOH HOH . K 7 HOH A 220 720 479 HOH HOH . K 7 HOH A 221 721 28 HOH HOH . K 7 HOH A 222 722 110 HOH HOH . K 7 HOH A 223 723 487 HOH HOH . K 7 HOH A 224 724 478 HOH HOH . K 7 HOH A 225 725 38 HOH HOH . K 7 HOH A 226 726 165 HOH HOH . K 7 HOH A 227 727 76 HOH HOH . K 7 HOH A 228 728 499 HOH HOH . K 7 HOH A 229 729 415 HOH HOH . K 7 HOH A 230 730 27 HOH HOH . K 7 HOH A 231 731 110 HOH HOH . K 7 HOH A 232 732 490 HOH HOH . K 7 HOH A 233 733 410 HOH HOH . K 7 HOH A 234 734 404 HOH HOH . K 7 HOH A 235 735 306 HOH HOH . K 7 HOH A 236 736 50 HOH HOH . K 7 HOH A 237 737 488 HOH HOH . K 7 HOH A 238 738 20 HOH HOH . K 7 HOH A 239 739 414 HOH HOH . K 7 HOH A 240 740 147 HOH HOH . K 7 HOH A 241 741 23 HOH HOH . K 7 HOH A 242 742 78 HOH HOH . K 7 HOH A 243 743 492 HOH HOH . K 7 HOH A 244 744 500 HOH HOH . K 7 HOH A 245 745 242 HOH HOH . K 7 HOH A 246 746 491 HOH HOH . K 7 HOH A 247 747 411 HOH HOH . K 7 HOH A 248 748 418 HOH HOH . K 7 HOH A 249 749 184 HOH HOH . K 7 HOH A 250 750 113 HOH HOH . K 7 HOH A 251 751 148 HOH HOH . K 7 HOH A 252 752 183 HOH HOH . K 7 HOH A 253 753 88 HOH HOH . K 7 HOH A 254 754 496 HOH HOH . K 7 HOH A 255 755 412 HOH HOH . K 7 HOH A 256 756 73 HOH HOH . K 7 HOH A 257 757 174 HOH HOH . K 7 HOH A 258 758 493 HOH HOH . K 7 HOH A 259 759 510 HOH HOH . K 7 HOH A 260 760 104 HOH HOH . K 7 HOH A 261 761 97 HOH HOH . K 7 HOH A 262 762 203 HOH HOH . K 7 HOH A 263 763 171 HOH HOH . K 7 HOH A 264 764 477 HOH HOH . K 7 HOH A 265 765 172 HOH HOH . K 7 HOH A 266 766 92 HOH HOH . K 7 HOH A 267 767 468 HOH HOH . K 7 HOH A 268 768 223 HOH HOH . K 7 HOH A 269 769 235 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 4 _atom_site.Cartn_x 43.82 _atom_site.Cartn_y 111.564 _atom_site.Cartn_z 28.885 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 31.43 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 407 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #