data_5RA1 # _model_server_result.job_id B1gCSR-VfN0wMfyzoG0qAA _model_server_result.datetime_utc '2025-01-11 04:58:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ra1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 5RA1 # _exptl.entry_id 5RA1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5RA1 _cell.length_a 45.89 _cell.length_b 86.58 _cell.length_c 126.77 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5RA1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 150 A ASP 150 1_555 H MG MG . A MG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.906 ? metalc ? metalc2 A OD2 ASP 168 A ASP 168 1_555 H MG MG . A MG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc3 H MG MG . A MG 407 1_555 M O HOH . A HOH 561 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc4 H MG MG . A MG 407 1_555 M O HOH . A HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? metalc ? metalc5 H MG MG . A MG 407 1_555 M O HOH . A HOH 669 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5RA1 _atom_sites.fract_transf_matrix[1][1] 0.021791 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01155 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007888 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO6 A 1 401 401 PO6 LIG . C 3 CL A 1 402 3 CL CL . D 3 CL A 1 403 4 CL CL . E 3 CL A 1 404 5 CL CL . F 3 CL A 1 405 6 CL CL . G 3 CL A 1 406 7 CL CL . H 4 MG A 1 407 1 MG MG . I 5 SO4 A 1 408 1 SO4 SO4 . J 5 SO4 A 1 409 2 SO4 SO4 . K 5 SO4 A 1 410 3 SO4 SO4 . L 6 DMS A 1 411 1 DMS DMS . M 7 HOH A 1 501 422 HOH HOH . M 7 HOH A 2 502 152 HOH HOH . M 7 HOH A 3 503 186 HOH HOH . M 7 HOH A 4 504 480 HOH HOH . M 7 HOH A 5 505 178 HOH HOH . M 7 HOH A 6 506 63 HOH HOH . M 7 HOH A 7 507 16 HOH HOH . M 7 HOH A 8 508 159 HOH HOH . M 7 HOH A 9 509 20 HOH HOH . M 7 HOH A 10 510 71 HOH HOH . M 7 HOH A 11 511 133 HOH HOH . M 7 HOH A 12 512 25 HOH HOH . M 7 HOH A 13 513 15 HOH HOH . M 7 HOH A 14 514 43 HOH HOH . M 7 HOH A 15 515 72 HOH HOH . M 7 HOH A 16 516 51 HOH HOH . M 7 HOH A 17 517 60 HOH HOH . M 7 HOH A 18 518 14 HOH HOH . M 7 HOH A 19 519 165 HOH HOH . M 7 HOH A 20 520 21 HOH HOH . M 7 HOH A 21 521 95 HOH HOH . M 7 HOH A 22 522 138 HOH HOH . M 7 HOH A 23 523 117 HOH HOH . M 7 HOH A 24 524 38 HOH HOH . M 7 HOH A 25 525 90 HOH HOH . M 7 HOH A 26 526 86 HOH HOH . M 7 HOH A 27 527 409 HOH HOH . M 7 HOH A 28 528 504 HOH HOH . M 7 HOH A 29 529 108 HOH HOH . M 7 HOH A 30 530 33 HOH HOH . M 7 HOH A 31 531 300 HOH HOH . M 7 HOH A 32 532 24 HOH HOH . M 7 HOH A 33 533 6 HOH HOH . M 7 HOH A 34 534 44 HOH HOH . M 7 HOH A 35 535 29 HOH HOH . M 7 HOH A 36 536 46 HOH HOH . M 7 HOH A 37 537 273 HOH HOH . M 7 HOH A 38 538 22 HOH HOH . M 7 HOH A 39 539 484 HOH HOH . M 7 HOH A 40 540 56 HOH HOH . M 7 HOH A 41 541 47 HOH HOH . M 7 HOH A 42 542 123 HOH HOH . M 7 HOH A 43 543 96 HOH HOH . M 7 HOH A 44 544 130 HOH HOH . M 7 HOH A 45 545 166 HOH HOH . M 7 HOH A 46 546 168 HOH HOH . M 7 HOH A 47 547 91 HOH HOH . M 7 HOH A 48 548 2 HOH HOH . M 7 HOH A 49 549 507 HOH HOH . M 7 HOH A 50 550 160 HOH HOH . M 7 HOH A 51 551 115 HOH HOH . M 7 HOH A 52 552 64 HOH HOH . M 7 HOH A 53 553 239 HOH HOH . M 7 HOH A 54 554 17 HOH HOH . M 7 HOH A 55 555 5 HOH HOH . M 7 HOH A 56 556 42 HOH HOH . M 7 HOH A 57 557 99 HOH HOH . M 7 HOH A 58 558 103 HOH HOH . M 7 HOH A 59 559 236 HOH HOH . M 7 HOH A 60 560 237 HOH HOH . M 7 HOH A 61 561 513 HOH HOH . M 7 HOH A 62 562 50 HOH HOH . M 7 HOH A 63 563 74 HOH HOH . M 7 HOH A 64 564 121 HOH HOH . M 7 HOH A 65 565 107 HOH HOH . M 7 HOH A 66 566 3 HOH HOH . M 7 HOH A 67 567 2 HOH HOH . M 7 HOH A 68 568 30 HOH HOH . M 7 HOH A 69 569 15 HOH HOH . M 7 HOH A 70 570 58 HOH HOH . M 7 HOH A 71 571 26 HOH HOH . M 7 HOH A 72 572 68 HOH HOH . M 7 HOH A 73 573 9 HOH HOH . M 7 HOH A 74 574 52 HOH HOH . M 7 HOH A 75 575 486 HOH HOH . M 7 HOH A 76 576 116 HOH HOH . M 7 HOH A 77 577 69 HOH HOH . M 7 HOH A 78 578 192 HOH HOH . M 7 HOH A 79 579 23 HOH HOH . M 7 HOH A 80 580 67 HOH HOH . M 7 HOH A 81 581 76 HOH HOH . M 7 HOH A 82 582 89 HOH HOH . M 7 HOH A 83 583 49 HOH HOH . M 7 HOH A 84 584 136 HOH HOH . M 7 HOH A 85 585 34 HOH HOH . M 7 HOH A 86 586 22 HOH HOH . M 7 HOH A 87 587 201 HOH HOH . M 7 HOH A 88 588 187 HOH HOH . M 7 HOH A 89 589 13 HOH HOH . M 7 HOH A 90 590 209 HOH HOH . M 7 HOH A 91 591 29 HOH HOH . M 7 HOH A 92 592 508 HOH HOH . M 7 HOH A 93 593 93 HOH HOH . M 7 HOH A 94 594 24 HOH HOH . M 7 HOH A 95 595 144 HOH HOH . M 7 HOH A 96 596 2 HOH HOH . M 7 HOH A 97 597 119 HOH HOH . M 7 HOH A 98 598 79 HOH HOH . M 7 HOH A 99 599 36 HOH HOH . M 7 HOH A 100 600 390 HOH HOH . M 7 HOH A 101 601 514 HOH HOH . M 7 HOH A 102 602 122 HOH HOH . M 7 HOH A 103 603 474 HOH HOH . M 7 HOH A 104 604 482 HOH HOH . M 7 HOH A 105 605 62 HOH HOH . M 7 HOH A 106 606 1 HOH HOH . M 7 HOH A 107 607 475 HOH HOH . M 7 HOH A 108 608 177 HOH HOH . M 7 HOH A 109 609 114 HOH HOH . M 7 HOH A 110 610 111 HOH HOH . M 7 HOH A 111 611 39 HOH HOH . M 7 HOH A 112 612 228 HOH HOH . M 7 HOH A 113 613 183 HOH HOH . M 7 HOH A 114 614 6 HOH HOH . M 7 HOH A 115 615 194 HOH HOH . M 7 HOH A 116 616 46 HOH HOH . M 7 HOH A 117 617 502 HOH HOH . M 7 HOH A 118 618 48 HOH HOH . M 7 HOH A 119 619 65 HOH HOH . M 7 HOH A 120 620 32 HOH HOH . M 7 HOH A 121 621 84 HOH HOH . M 7 HOH A 122 622 476 HOH HOH . M 7 HOH A 123 623 481 HOH HOH . M 7 HOH A 124 624 12 HOH HOH . M 7 HOH A 125 625 23 HOH HOH . M 7 HOH A 126 626 127 HOH HOH . M 7 HOH A 127 627 254 HOH HOH . M 7 HOH A 128 628 416 HOH HOH . M 7 HOH A 129 629 70 HOH HOH . M 7 HOH A 130 630 64 HOH HOH . M 7 HOH A 131 631 75 HOH HOH . M 7 HOH A 132 632 59 HOH HOH . M 7 HOH A 133 633 129 HOH HOH . M 7 HOH A 134 634 9 HOH HOH . M 7 HOH A 135 635 41 HOH HOH . M 7 HOH A 136 636 175 HOH HOH . M 7 HOH A 137 637 125 HOH HOH . M 7 HOH A 138 638 134 HOH HOH . M 7 HOH A 139 639 172 HOH HOH . M 7 HOH A 140 640 515 HOH HOH . M 7 HOH A 141 641 86 HOH HOH . M 7 HOH A 142 642 37 HOH HOH . M 7 HOH A 143 643 105 HOH HOH . M 7 HOH A 144 644 43 HOH HOH . M 7 HOH A 145 645 417 HOH HOH . M 7 HOH A 146 646 117 HOH HOH . M 7 HOH A 147 647 31 HOH HOH . M 7 HOH A 148 648 244 HOH HOH . M 7 HOH A 149 649 85 HOH HOH . M 7 HOH A 150 650 8 HOH HOH . M 7 HOH A 151 651 21 HOH HOH . M 7 HOH A 152 652 140 HOH HOH . M 7 HOH A 153 653 46 HOH HOH . M 7 HOH A 154 654 7 HOH HOH . M 7 HOH A 155 655 511 HOH HOH . M 7 HOH A 156 656 174 HOH HOH . M 7 HOH A 157 657 509 HOH HOH . M 7 HOH A 158 658 25 HOH HOH . M 7 HOH A 159 659 40 HOH HOH . M 7 HOH A 160 660 27 HOH HOH . M 7 HOH A 161 661 207 HOH HOH . M 7 HOH A 162 662 283 HOH HOH . M 7 HOH A 163 663 145 HOH HOH . M 7 HOH A 164 664 210 HOH HOH . M 7 HOH A 165 665 155 HOH HOH . M 7 HOH A 166 666 126 HOH HOH . M 7 HOH A 167 667 66 HOH HOH . M 7 HOH A 168 668 135 HOH HOH . M 7 HOH A 169 669 512 HOH HOH . M 7 HOH A 170 670 171 HOH HOH . M 7 HOH A 171 671 406 HOH HOH . M 7 HOH A 172 672 12 HOH HOH . M 7 HOH A 173 673 132 HOH HOH . M 7 HOH A 174 674 55 HOH HOH . M 7 HOH A 175 675 141 HOH HOH . M 7 HOH A 176 676 139 HOH HOH . M 7 HOH A 177 677 45 HOH HOH . M 7 HOH A 178 678 35 HOH HOH . M 7 HOH A 179 679 59 HOH HOH . M 7 HOH A 180 680 5 HOH HOH . M 7 HOH A 181 681 11 HOH HOH . M 7 HOH A 182 682 426 HOH HOH . M 7 HOH A 183 683 505 HOH HOH . M 7 HOH A 184 684 37 HOH HOH . M 7 HOH A 185 685 52 HOH HOH . M 7 HOH A 186 686 44 HOH HOH . M 7 HOH A 187 687 23 HOH HOH . M 7 HOH A 188 688 20 HOH HOH . M 7 HOH A 189 689 15 HOH HOH . M 7 HOH A 190 690 98 HOH HOH . M 7 HOH A 191 691 193 HOH HOH . M 7 HOH A 192 692 18 HOH HOH . M 7 HOH A 193 693 137 HOH HOH . M 7 HOH A 194 694 8 HOH HOH . M 7 HOH A 195 695 18 HOH HOH . M 7 HOH A 196 696 152 HOH HOH . M 7 HOH A 197 697 501 HOH HOH . M 7 HOH A 198 698 421 HOH HOH . M 7 HOH A 199 699 1 HOH HOH . M 7 HOH A 200 700 28 HOH HOH . M 7 HOH A 201 701 479 HOH HOH . M 7 HOH A 202 702 35 HOH HOH . M 7 HOH A 203 703 226 HOH HOH . M 7 HOH A 204 704 110 HOH HOH . M 7 HOH A 205 705 267 HOH HOH . M 7 HOH A 206 706 500 HOH HOH . M 7 HOH A 207 707 34 HOH HOH . M 7 HOH A 208 708 183 HOH HOH . M 7 HOH A 209 709 499 HOH HOH . M 7 HOH A 210 710 165 HOH HOH . M 7 HOH A 211 711 487 HOH HOH . M 7 HOH A 212 712 478 HOH HOH . M 7 HOH A 213 713 80 HOH HOH . M 7 HOH A 214 714 38 HOH HOH . M 7 HOH A 215 715 27 HOH HOH . M 7 HOH A 216 716 113 HOH HOH . M 7 HOH A 217 717 410 HOH HOH . M 7 HOH A 218 718 306 HOH HOH . M 7 HOH A 219 719 76 HOH HOH . M 7 HOH A 220 720 404 HOH HOH . M 7 HOH A 221 721 147 HOH HOH . M 7 HOH A 222 722 23 HOH HOH . M 7 HOH A 223 723 488 HOH HOH . M 7 HOH A 224 724 20 HOH HOH . M 7 HOH A 225 725 110 HOH HOH . M 7 HOH A 226 726 78 HOH HOH . M 7 HOH A 227 727 414 HOH HOH . M 7 HOH A 228 728 415 HOH HOH . M 7 HOH A 229 729 492 HOH HOH . M 7 HOH A 230 730 411 HOH HOH . M 7 HOH A 231 731 490 HOH HOH . M 7 HOH A 232 732 493 HOH HOH . M 7 HOH A 233 733 148 HOH HOH . M 7 HOH A 234 734 183 HOH HOH . M 7 HOH A 235 735 174 HOH HOH . M 7 HOH A 236 736 88 HOH HOH . M 7 HOH A 237 737 73 HOH HOH . M 7 HOH A 238 738 491 HOH HOH . M 7 HOH A 239 739 412 HOH HOH . M 7 HOH A 240 740 496 HOH HOH . M 7 HOH A 241 741 97 HOH HOH . M 7 HOH A 242 742 510 HOH HOH . M 7 HOH A 243 743 104 HOH HOH . M 7 HOH A 244 744 171 HOH HOH . M 7 HOH A 245 745 477 HOH HOH . M 7 HOH A 246 746 203 HOH HOH . M 7 HOH A 247 747 92 HOH HOH . M 7 HOH A 248 748 172 HOH HOH . M 7 HOH A 249 749 468 HOH HOH . M 7 HOH A 250 750 235 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 63.019 _atom_site.Cartn_y 129.701 _atom_site.Cartn_z 41.871 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 43.28 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 402 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #