data_5RC8 # _model_server_result.job_id XtajSghkj01H1tDGJbaIzw _model_server_result.datetime_utc '2024-11-08 09:06:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5rc8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":407}' # _entry.id 5RC8 # _exptl.entry_id 5RC8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.1 _cell.angle_gamma 90 _cell.entry_id 5RC8 _cell.length_a 45.195 _cell.length_b 72.971 _cell.length_c 52.423 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5RC8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 344 A CYS 255 1_555 A SG CYS 379 A CYS 290 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? metalc ? metalc1 I O1 PG4 . A PG4 408 1_555 J NA NA . A NA 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.051 ? metalc ? metalc2 I O2 PG4 . A PG4 408 1_555 J NA NA . A NA 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.008 ? metalc ? metalc3 I O5 PG4 . A PG4 408 1_555 J NA NA . A NA 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.572 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 5RC8 _atom_sites.fract_transf_matrix[1][1] 0.022126 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007664 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013704 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020187 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 RCV A 1 401 401 RCV XXX . C 3 DMS A 1 402 501 DMS DMS . D 4 GOL A 1 403 601 GOL GOL . E 4 GOL A 1 404 701 GOL GOL . F 4 GOL A 1 405 402 GOL GOL . G 4 GOL A 1 406 403 GOL GOL . H 5 ACT A 1 407 405 ACT ACT . I 6 PG4 A 1 408 407 PG4 PG4 . J 7 NA A 1 409 408 NA NA . K 8 HOH A 1 501 105 HOH HOH . K 8 HOH A 2 502 155 HOH HOH . K 8 HOH A 3 503 240 HOH HOH . K 8 HOH A 4 504 82 HOH HOH . K 8 HOH A 5 505 256 HOH HOH . K 8 HOH A 6 506 79 HOH HOH . K 8 HOH A 7 507 36 HOH HOH . K 8 HOH A 8 508 241 HOH HOH . K 8 HOH A 9 509 250 HOH HOH . K 8 HOH A 10 510 166 HOH HOH . K 8 HOH A 11 511 204 HOH HOH . K 8 HOH A 12 512 115 HOH HOH . K 8 HOH A 13 513 213 HOH HOH . K 8 HOH A 14 514 47 HOH HOH . K 8 HOH A 15 515 231 HOH HOH . K 8 HOH A 16 516 235 HOH HOH . K 8 HOH A 17 517 165 HOH HOH . K 8 HOH A 18 518 50 HOH HOH . K 8 HOH A 19 519 129 HOH HOH . K 8 HOH A 20 520 127 HOH HOH . K 8 HOH A 21 521 197 HOH HOH . K 8 HOH A 22 522 72 HOH HOH . K 8 HOH A 23 523 196 HOH HOH . K 8 HOH A 24 524 184 HOH HOH . K 8 HOH A 25 525 140 HOH HOH . K 8 HOH A 26 526 81 HOH HOH . K 8 HOH A 27 527 226 HOH HOH . K 8 HOH A 28 528 146 HOH HOH . K 8 HOH A 29 529 63 HOH HOH . K 8 HOH A 30 530 13 HOH HOH . K 8 HOH A 31 531 179 HOH HOH . K 8 HOH A 32 532 54 HOH HOH . K 8 HOH A 33 533 46 HOH HOH . K 8 HOH A 34 534 186 HOH HOH . K 8 HOH A 35 535 26 HOH HOH . K 8 HOH A 36 536 157 HOH HOH . K 8 HOH A 37 537 21 HOH HOH . K 8 HOH A 38 538 20 HOH HOH . K 8 HOH A 39 539 27 HOH HOH . K 8 HOH A 40 540 76 HOH HOH . K 8 HOH A 41 541 149 HOH HOH . K 8 HOH A 42 542 3 HOH HOH . K 8 HOH A 43 543 174 HOH HOH . K 8 HOH A 44 544 25 HOH HOH . K 8 HOH A 45 545 147 HOH HOH . K 8 HOH A 46 546 22 HOH HOH . K 8 HOH A 47 547 183 HOH HOH . K 8 HOH A 48 548 220 HOH HOH . K 8 HOH A 49 549 99 HOH HOH . K 8 HOH A 50 550 230 HOH HOH . K 8 HOH A 51 551 66 HOH HOH . K 8 HOH A 52 552 171 HOH HOH . K 8 HOH A 53 553 205 HOH HOH . K 8 HOH A 54 554 34 HOH HOH . K 8 HOH A 55 555 23 HOH HOH . K 8 HOH A 56 556 259 HOH HOH . K 8 HOH A 57 557 10 HOH HOH . K 8 HOH A 58 558 39 HOH HOH . K 8 HOH A 59 559 113 HOH HOH . K 8 HOH A 60 560 4 HOH HOH . K 8 HOH A 61 561 192 HOH HOH . K 8 HOH A 62 562 43 HOH HOH . K 8 HOH A 63 563 70 HOH HOH . K 8 HOH A 64 564 215 HOH HOH . K 8 HOH A 65 565 40 HOH HOH . K 8 HOH A 66 566 44 HOH HOH . K 8 HOH A 67 567 244 HOH HOH . K 8 HOH A 68 568 38 HOH HOH . K 8 HOH A 69 569 117 HOH HOH . K 8 HOH A 70 570 11 HOH HOH . K 8 HOH A 71 571 83 HOH HOH . K 8 HOH A 72 572 176 HOH HOH . K 8 HOH A 73 573 190 HOH HOH . K 8 HOH A 74 574 16 HOH HOH . K 8 HOH A 75 575 194 HOH HOH . K 8 HOH A 76 576 80 HOH HOH . K 8 HOH A 77 577 18 HOH HOH . K 8 HOH A 78 578 108 HOH HOH . K 8 HOH A 79 579 6 HOH HOH . K 8 HOH A 80 580 100 HOH HOH . K 8 HOH A 81 581 137 HOH HOH . K 8 HOH A 82 582 53 HOH HOH . K 8 HOH A 83 583 31 HOH HOH . K 8 HOH A 84 584 237 HOH HOH . K 8 HOH A 85 585 189 HOH HOH . K 8 HOH A 86 586 130 HOH HOH . K 8 HOH A 87 587 42 HOH HOH . K 8 HOH A 88 588 169 HOH HOH . K 8 HOH A 89 589 177 HOH HOH . K 8 HOH A 90 590 159 HOH HOH . K 8 HOH A 91 591 131 HOH HOH . K 8 HOH A 92 592 247 HOH HOH . K 8 HOH A 93 593 57 HOH HOH . K 8 HOH A 94 594 124 HOH HOH . K 8 HOH A 95 595 5 HOH HOH . K 8 HOH A 96 596 28 HOH HOH . K 8 HOH A 97 597 178 HOH HOH . K 8 HOH A 98 598 65 HOH HOH . K 8 HOH A 99 599 160 HOH HOH . K 8 HOH A 100 600 94 HOH HOH . K 8 HOH A 101 601 123 HOH HOH . K 8 HOH A 102 602 125 HOH HOH . K 8 HOH A 103 603 33 HOH HOH . K 8 HOH A 104 604 145 HOH HOH . K 8 HOH A 105 605 91 HOH HOH . K 8 HOH A 106 606 243 HOH HOH . K 8 HOH A 107 607 191 HOH HOH . K 8 HOH A 108 608 14 HOH HOH . K 8 HOH A 109 609 116 HOH HOH . K 8 HOH A 110 610 193 HOH HOH . K 8 HOH A 111 611 93 HOH HOH . K 8 HOH A 112 612 41 HOH HOH . K 8 HOH A 113 613 58 HOH HOH . K 8 HOH A 114 614 202 HOH HOH . K 8 HOH A 115 615 8 HOH HOH . K 8 HOH A 116 616 136 HOH HOH . K 8 HOH A 117 617 98 HOH HOH . K 8 HOH A 118 618 195 HOH HOH . K 8 HOH A 119 619 17 HOH HOH . K 8 HOH A 120 620 201 HOH HOH . K 8 HOH A 121 621 92 HOH HOH . K 8 HOH A 122 622 245 HOH HOH . K 8 HOH A 123 623 175 HOH HOH . K 8 HOH A 124 624 209 HOH HOH . K 8 HOH A 125 625 135 HOH HOH . K 8 HOH A 126 626 187 HOH HOH . K 8 HOH A 127 627 9 HOH HOH . K 8 HOH A 128 628 110 HOH HOH . K 8 HOH A 129 629 96 HOH HOH . K 8 HOH A 130 630 64 HOH HOH . K 8 HOH A 131 631 48 HOH HOH . K 8 HOH A 132 632 260 HOH HOH . K 8 HOH A 133 633 51 HOH HOH . K 8 HOH A 134 634 221 HOH HOH . K 8 HOH A 135 635 104 HOH HOH . K 8 HOH A 136 636 85 HOH HOH . K 8 HOH A 137 637 45 HOH HOH . K 8 HOH A 138 638 206 HOH HOH . K 8 HOH A 139 639 161 HOH HOH . K 8 HOH A 140 640 162 HOH HOH . K 8 HOH A 141 641 15 HOH HOH . K 8 HOH A 142 642 199 HOH HOH . K 8 HOH A 143 643 233 HOH HOH . K 8 HOH A 144 644 168 HOH HOH . K 8 HOH A 145 645 109 HOH HOH . K 8 HOH A 146 646 141 HOH HOH . K 8 HOH A 147 647 67 HOH HOH . K 8 HOH A 148 648 151 HOH HOH . K 8 HOH A 149 649 134 HOH HOH . K 8 HOH A 150 650 180 HOH HOH . K 8 HOH A 151 651 219 HOH HOH . K 8 HOH A 152 652 86 HOH HOH . K 8 HOH A 153 653 29 HOH HOH . K 8 HOH A 154 654 19 HOH HOH . K 8 HOH A 155 655 84 HOH HOH . K 8 HOH A 156 656 32 HOH HOH . K 8 HOH A 157 657 52 HOH HOH . K 8 HOH A 158 658 87 HOH HOH . K 8 HOH A 159 659 55 HOH HOH . K 8 HOH A 160 660 112 HOH HOH . K 8 HOH A 161 661 249 HOH HOH . K 8 HOH A 162 662 106 HOH HOH . K 8 HOH A 163 663 49 HOH HOH . K 8 HOH A 164 664 74 HOH HOH . K 8 HOH A 165 665 78 HOH HOH . K 8 HOH A 166 666 73 HOH HOH . K 8 HOH A 167 667 97 HOH HOH . K 8 HOH A 168 668 122 HOH HOH . K 8 HOH A 169 669 246 HOH HOH . K 8 HOH A 170 670 257 HOH HOH . K 8 HOH A 171 671 37 HOH HOH . K 8 HOH A 172 672 119 HOH HOH . K 8 HOH A 173 673 232 HOH HOH . K 8 HOH A 174 674 61 HOH HOH . K 8 HOH A 175 675 121 HOH HOH . K 8 HOH A 176 676 90 HOH HOH . K 8 HOH A 177 677 222 HOH HOH . K 8 HOH A 178 678 88 HOH HOH . K 8 HOH A 179 679 150 HOH HOH . K 8 HOH A 180 680 253 HOH HOH . K 8 HOH A 181 681 148 HOH HOH . K 8 HOH A 182 682 2 HOH HOH . K 8 HOH A 183 683 75 HOH HOH . K 8 HOH A 184 684 77 HOH HOH . K 8 HOH A 185 685 138 HOH HOH . K 8 HOH A 186 686 154 HOH HOH . K 8 HOH A 187 687 120 HOH HOH . K 8 HOH A 188 688 223 HOH HOH . K 8 HOH A 189 689 228 HOH HOH . K 8 HOH A 190 690 144 HOH HOH . K 8 HOH A 191 691 56 HOH HOH . K 8 HOH A 192 692 101 HOH HOH . K 8 HOH A 193 693 133 HOH HOH . K 8 HOH A 194 694 69 HOH HOH . K 8 HOH A 195 695 254 HOH HOH . K 8 HOH A 196 696 242 HOH HOH . K 8 HOH A 197 697 188 HOH HOH . K 8 HOH A 198 698 258 HOH HOH . K 8 HOH A 199 699 139 HOH HOH . K 8 HOH A 200 700 200 HOH HOH . K 8 HOH A 201 701 224 HOH HOH . K 8 HOH A 202 702 181 HOH HOH . K 8 HOH A 203 703 142 HOH HOH . K 8 HOH A 204 704 167 HOH HOH . K 8 HOH A 205 705 164 HOH HOH . K 8 HOH A 206 706 118 HOH HOH . K 8 HOH A 207 707 214 HOH HOH . K 8 HOH A 208 708 210 HOH HOH . K 8 HOH A 209 709 68 HOH HOH . K 8 HOH A 210 710 261 HOH HOH . K 8 HOH A 211 711 143 HOH HOH . K 8 HOH A 212 712 111 HOH HOH . K 8 HOH A 213 713 156 HOH HOH . K 8 HOH A 214 714 182 HOH HOH . K 8 HOH A 215 715 173 HOH HOH . K 8 HOH A 216 716 126 HOH HOH . K 8 HOH A 217 717 163 HOH HOH . K 8 HOH A 218 718 211 HOH HOH . K 8 HOH A 219 719 153 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . H 5 15.111 -2.709 39.281 1 35.14 ? C ACT 407 A 1 HETATM 2 O O ACT . . . H 5 13.955 -3.178 39.49 1 37.73 ? O ACT 407 A 1 HETATM 3 O OXT ACT . . . H 5 16.008 -2.782 40.142 1 30.93 ? OXT ACT 407 A 1 HETATM 4 C CH3 ACT . . . H 5 15.423 -1.953 37.936 1 26.23 ? CH3 ACT 407 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 242 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #