data_5RH8 # _model_server_result.job_id Ex23S8TVuFOquAqsDaaZww _model_server_result.datetime_utc '2024-11-08 11:54:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5rh8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":405}' # _entry.id 5RH8 # _exptl.entry_id 5RH8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 273.31 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(cyanomethoxy)-N-[(1,2-thiazol-4-yl)methyl]benzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.04 _cell.angle_gamma 90 _cell.entry_id 5RH8 _cell.length_a 113.065 _cell.length_b 53.047 _cell.length_c 44.565 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5RH8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C13 H11 N3 O2 S' _chem_comp.formula_weight 273.31 _chem_comp.id UHM _chem_comp.mon_nstd_flag . _chem_comp.name 2-(cyanomethoxy)-N-[(1,2-thiazol-4-yl)methyl]benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C7 C8 UHM doub 367 n y C7 C6 UHM sing 368 n y C8 C9 UHM sing 369 n y C6 C5 UHM doub 370 n y C9 C10 UHM doub 371 n y C5 C10 UHM sing 372 n y C5 C UHM sing 373 n n C10 O1 UHM sing 374 n n C O UHM doub 375 n n C N UHM sing 376 n n N C1 UHM sing 377 n n O1 C11 UHM sing 378 n n C3 N1 UHM doub 379 n y C3 C2 UHM sing 380 n y C11 C12 UHM sing 381 n n C12 N2 UHM trip 382 n n C1 C2 UHM sing 383 n n N1 S UHM sing 384 n y C2 C4 UHM doub 385 n y C4 S UHM sing 386 n y C4 H1 UHM sing 387 n n C6 H2 UHM sing 388 n n C7 H3 UHM sing 389 n n C8 H4 UHM sing 390 n n C11 H5 UHM sing 391 n n C11 H6 UHM sing 392 n n C9 H7 UHM sing 393 n n N H8 UHM sing 394 n n C1 H9 UHM sing 395 n n C1 H10 UHM sing 396 n n C3 H11 UHM sing 397 n n # _atom_sites.entry_id 5RH8 _atom_sites.fract_transf_matrix[1][1] 0.008844 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002048 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018851 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023033 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DMS A 1 401 1002 DMS DMS . C 2 DMS A 1 402 1003 DMS DMS . D 2 DMS A 1 403 1004 DMS DMS . E 2 DMS A 1 404 1006 DMS DMS . F 3 UHM A 1 405 1101 UHM LIG . G 4 HOH A 1 501 174 HOH HOH . G 4 HOH A 2 502 186 HOH HOH . G 4 HOH A 3 503 34 HOH HOH . G 4 HOH A 4 504 29 HOH HOH . G 4 HOH A 5 505 41 HOH HOH . G 4 HOH A 6 506 68 HOH HOH . G 4 HOH A 7 507 112 HOH HOH . G 4 HOH A 8 508 25 HOH HOH . G 4 HOH A 9 509 236 HOH HOH . G 4 HOH A 10 510 36 HOH HOH . G 4 HOH A 11 511 9 HOH HOH . G 4 HOH A 12 512 205 HOH HOH . G 4 HOH A 13 513 59 HOH HOH . G 4 HOH A 14 514 99 HOH HOH . G 4 HOH A 15 515 88 HOH HOH . G 4 HOH A 16 516 7 HOH HOH . G 4 HOH A 17 517 204 HOH HOH . G 4 HOH A 18 518 77 HOH HOH . G 4 HOH A 19 519 198 HOH HOH . G 4 HOH A 20 520 62 HOH HOH . G 4 HOH A 21 521 131 HOH HOH . G 4 HOH A 22 522 96 HOH HOH . G 4 HOH A 23 523 61 HOH HOH . G 4 HOH A 24 524 164 HOH HOH . G 4 HOH A 25 525 78 HOH HOH . G 4 HOH A 26 526 100 HOH HOH . G 4 HOH A 27 527 3 HOH HOH . G 4 HOH A 28 528 195 HOH HOH . G 4 HOH A 29 529 71 HOH HOH . G 4 HOH A 30 530 117 HOH HOH . G 4 HOH A 31 531 138 HOH HOH . G 4 HOH A 32 532 126 HOH HOH . G 4 HOH A 33 533 42 HOH HOH . G 4 HOH A 34 534 35 HOH HOH . G 4 HOH A 35 535 170 HOH HOH . G 4 HOH A 36 536 95 HOH HOH . G 4 HOH A 37 537 1 HOH HOH . G 4 HOH A 38 538 83 HOH HOH . G 4 HOH A 39 539 90 HOH HOH . G 4 HOH A 40 540 58 HOH HOH . G 4 HOH A 41 541 92 HOH HOH . G 4 HOH A 42 542 125 HOH HOH . G 4 HOH A 43 543 4 HOH HOH . G 4 HOH A 44 544 222 HOH HOH . G 4 HOH A 45 545 52 HOH HOH . G 4 HOH A 46 546 43 HOH HOH . G 4 HOH A 47 547 133 HOH HOH . G 4 HOH A 48 548 38 HOH HOH . G 4 HOH A 49 549 60 HOH HOH . G 4 HOH A 50 550 6 HOH HOH . G 4 HOH A 51 551 50 HOH HOH . G 4 HOH A 52 552 27 HOH HOH . G 4 HOH A 53 553 72 HOH HOH . G 4 HOH A 54 554 249 HOH HOH . G 4 HOH A 55 555 130 HOH HOH . G 4 HOH A 56 556 206 HOH HOH . G 4 HOH A 57 557 73 HOH HOH . G 4 HOH A 58 558 17 HOH HOH . G 4 HOH A 59 559 33 HOH HOH . G 4 HOH A 60 560 200 HOH HOH . G 4 HOH A 61 561 120 HOH HOH . G 4 HOH A 62 562 82 HOH HOH . G 4 HOH A 63 563 51 HOH HOH . G 4 HOH A 64 564 101 HOH HOH . G 4 HOH A 65 565 30 HOH HOH . G 4 HOH A 66 566 199 HOH HOH . G 4 HOH A 67 567 135 HOH HOH . G 4 HOH A 68 568 127 HOH HOH . G 4 HOH A 69 569 40 HOH HOH . G 4 HOH A 70 570 158 HOH HOH . G 4 HOH A 71 571 12 HOH HOH . G 4 HOH A 72 572 104 HOH HOH . G 4 HOH A 73 573 15 HOH HOH . G 4 HOH A 74 574 210 HOH HOH . G 4 HOH A 75 575 87 HOH HOH . G 4 HOH A 76 576 45 HOH HOH . G 4 HOH A 77 577 28 HOH HOH . G 4 HOH A 78 578 119 HOH HOH . G 4 HOH A 79 579 140 HOH HOH . G 4 HOH A 80 580 19 HOH HOH . G 4 HOH A 81 581 142 HOH HOH . G 4 HOH A 82 582 20 HOH HOH . G 4 HOH A 83 583 105 HOH HOH . G 4 HOH A 84 584 74 HOH HOH . G 4 HOH A 85 585 14 HOH HOH . G 4 HOH A 86 586 23 HOH HOH . G 4 HOH A 87 587 182 HOH HOH . G 4 HOH A 88 588 93 HOH HOH . G 4 HOH A 89 589 139 HOH HOH . G 4 HOH A 90 590 57 HOH HOH . G 4 HOH A 91 591 209 HOH HOH . G 4 HOH A 92 592 5 HOH HOH . G 4 HOH A 93 593 153 HOH HOH . G 4 HOH A 94 594 79 HOH HOH . G 4 HOH A 95 595 237 HOH HOH . G 4 HOH A 96 596 217 HOH HOH . G 4 HOH A 97 597 24 HOH HOH . G 4 HOH A 98 598 190 HOH HOH . G 4 HOH A 99 599 255 HOH HOH . G 4 HOH A 100 600 37 HOH HOH . G 4 HOH A 101 601 207 HOH HOH . G 4 HOH A 102 602 22 HOH HOH . G 4 HOH A 103 603 18 HOH HOH . G 4 HOH A 104 604 10 HOH HOH . G 4 HOH A 105 605 21 HOH HOH . G 4 HOH A 106 606 67 HOH HOH . G 4 HOH A 107 607 260 HOH HOH . G 4 HOH A 108 608 56 HOH HOH . G 4 HOH A 109 609 11 HOH HOH . G 4 HOH A 110 610 225 HOH HOH . G 4 HOH A 111 611 13 HOH HOH . G 4 HOH A 112 612 102 HOH HOH . G 4 HOH A 113 613 235 HOH HOH . G 4 HOH A 114 614 54 HOH HOH . G 4 HOH A 115 615 89 HOH HOH . G 4 HOH A 116 616 223 HOH HOH . G 4 HOH A 117 617 2 HOH HOH . G 4 HOH A 118 618 81 HOH HOH . G 4 HOH A 119 619 147 HOH HOH . G 4 HOH A 120 620 66 HOH HOH . G 4 HOH A 121 621 53 HOH HOH . G 4 HOH A 122 622 121 HOH HOH . G 4 HOH A 123 623 132 HOH HOH . G 4 HOH A 124 624 75 HOH HOH . G 4 HOH A 125 625 103 HOH HOH . G 4 HOH A 126 626 171 HOH HOH . G 4 HOH A 127 627 172 HOH HOH . G 4 HOH A 128 628 86 HOH HOH . G 4 HOH A 129 629 80 HOH HOH . G 4 HOH A 130 630 185 HOH HOH . G 4 HOH A 131 631 70 HOH HOH . G 4 HOH A 132 632 137 HOH HOH . G 4 HOH A 133 633 213 HOH HOH . G 4 HOH A 134 634 218 HOH HOH . G 4 HOH A 135 635 8 HOH HOH . G 4 HOH A 136 636 26 HOH HOH . G 4 HOH A 137 637 159 HOH HOH . G 4 HOH A 138 638 165 HOH HOH . G 4 HOH A 139 639 44 HOH HOH . G 4 HOH A 140 640 254 HOH HOH . G 4 HOH A 141 641 150 HOH HOH . G 4 HOH A 142 642 219 HOH HOH . G 4 HOH A 143 643 107 HOH HOH . G 4 HOH A 144 644 163 HOH HOH . G 4 HOH A 145 645 64 HOH HOH . G 4 HOH A 146 646 179 HOH HOH . G 4 HOH A 147 647 116 HOH HOH . G 4 HOH A 148 648 233 HOH HOH . G 4 HOH A 149 649 31 HOH HOH . G 4 HOH A 150 650 63 HOH HOH . G 4 HOH A 151 651 136 HOH HOH . G 4 HOH A 152 652 98 HOH HOH . G 4 HOH A 153 653 49 HOH HOH . G 4 HOH A 154 654 114 HOH HOH . G 4 HOH A 155 655 252 HOH HOH . G 4 HOH A 156 656 111 HOH HOH . G 4 HOH A 157 657 157 HOH HOH . G 4 HOH A 158 658 184 HOH HOH . G 4 HOH A 159 659 48 HOH HOH . G 4 HOH A 160 660 208 HOH HOH . G 4 HOH A 161 661 167 HOH HOH . G 4 HOH A 162 662 76 HOH HOH . G 4 HOH A 163 663 94 HOH HOH . G 4 HOH A 164 664 176 HOH HOH . G 4 HOH A 165 665 162 HOH HOH . G 4 HOH A 166 666 110 HOH HOH . G 4 HOH A 167 667 113 HOH HOH . G 4 HOH A 168 668 259 HOH HOH . G 4 HOH A 169 669 123 HOH HOH . G 4 HOH A 170 670 55 HOH HOH . G 4 HOH A 171 671 214 HOH HOH . G 4 HOH A 172 672 246 HOH HOH . G 4 HOH A 173 673 262 HOH HOH . G 4 HOH A 174 674 134 HOH HOH . G 4 HOH A 175 675 201 HOH HOH . G 4 HOH A 176 676 224 HOH HOH . G 4 HOH A 177 677 32 HOH HOH . G 4 HOH A 178 678 16 HOH HOH . G 4 HOH A 179 679 173 HOH HOH . G 4 HOH A 180 680 203 HOH HOH . G 4 HOH A 181 681 253 HOH HOH . G 4 HOH A 182 682 243 HOH HOH . G 4 HOH A 183 683 141 HOH HOH . G 4 HOH A 184 684 229 HOH HOH . G 4 HOH A 185 685 151 HOH HOH . G 4 HOH A 186 686 145 HOH HOH . G 4 HOH A 187 687 85 HOH HOH . G 4 HOH A 188 688 220 HOH HOH . G 4 HOH A 189 689 122 HOH HOH . G 4 HOH A 190 690 118 HOH HOH . G 4 HOH A 191 691 245 HOH HOH . G 4 HOH A 192 692 175 HOH HOH . G 4 HOH A 193 693 169 HOH HOH . G 4 HOH A 194 694 115 HOH HOH . G 4 HOH A 195 695 177 HOH HOH . G 4 HOH A 196 696 161 HOH HOH . G 4 HOH A 197 697 187 HOH HOH . G 4 HOH A 198 698 188 HOH HOH . G 4 HOH A 199 699 144 HOH HOH . G 4 HOH A 200 700 109 HOH HOH . G 4 HOH A 201 701 251 HOH HOH . G 4 HOH A 202 702 124 HOH HOH . G 4 HOH A 203 703 146 HOH HOH . G 4 HOH A 204 704 69 HOH HOH . G 4 HOH A 205 705 226 HOH HOH . G 4 HOH A 206 706 232 HOH HOH . G 4 HOH A 207 707 240 HOH HOH . G 4 HOH A 208 708 160 HOH HOH . G 4 HOH A 209 709 154 HOH HOH . G 4 HOH A 210 710 248 HOH HOH . G 4 HOH A 211 711 215 HOH HOH . G 4 HOH A 212 712 47 HOH HOH . G 4 HOH A 213 713 212 HOH HOH . G 4 HOH A 214 714 216 HOH HOH . G 4 HOH A 215 715 256 HOH HOH . G 4 HOH A 216 716 257 HOH HOH . G 4 HOH A 217 717 191 HOH HOH . G 4 HOH A 218 718 228 HOH HOH . G 4 HOH A 219 719 181 HOH HOH . G 4 HOH A 220 720 250 HOH HOH . G 4 HOH A 221 721 193 HOH HOH . G 4 HOH A 222 722 244 HOH HOH . G 4 HOH A 223 723 168 HOH HOH . G 4 HOH A 224 724 106 HOH HOH . G 4 HOH A 225 725 148 HOH HOH . G 4 HOH A 226 726 261 HOH HOH . G 4 HOH A 227 727 192 HOH HOH . G 4 HOH A 228 728 178 HOH HOH . G 4 HOH A 229 729 234 HOH HOH . G 4 HOH A 230 730 194 HOH HOH . G 4 HOH A 231 731 242 HOH HOH . G 4 HOH A 232 732 202 HOH HOH . G 4 HOH A 233 733 97 HOH HOH . G 4 HOH A 234 734 128 HOH HOH . G 4 HOH A 235 735 211 HOH HOH . G 4 HOH A 236 736 156 HOH HOH . G 4 HOH A 237 737 129 HOH HOH . G 4 HOH A 238 738 230 HOH HOH . G 4 HOH A 239 739 46 HOH HOH . G 4 HOH A 240 740 258 HOH HOH . G 4 HOH A 241 741 149 HOH HOH . G 4 HOH A 242 742 84 HOH HOH . G 4 HOH A 243 743 197 HOH HOH . G 4 HOH A 244 744 231 HOH HOH . G 4 HOH A 245 745 247 HOH HOH . G 4 HOH A 246 746 183 HOH HOH . G 4 HOH A 247 747 143 HOH HOH . G 4 HOH A 248 748 152 HOH HOH . G 4 HOH A 249 749 239 HOH HOH . G 4 HOH A 250 750 65 HOH HOH . G 4 HOH A 251 751 108 HOH HOH . G 4 HOH A 252 752 166 HOH HOH . G 4 HOH A 253 753 180 HOH HOH . G 4 HOH A 254 754 39 HOH HOH . G 4 HOH A 255 755 227 HOH HOH . G 4 HOH A 256 756 196 HOH HOH . G 4 HOH A 257 757 238 HOH HOH . G 4 HOH A 258 758 91 HOH HOH . G 4 HOH A 259 759 241 HOH HOH . G 4 HOH A 260 760 189 HOH HOH . G 4 HOH A 261 761 221 HOH HOH . G 4 HOH A 262 762 155 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 UHM . . . F 3 12.747 -1.355 22.687 0.62 39.97 ? N1 UHM 405 A 1 HETATM 2 C C4 UHM . . . F 3 10.899 -1.665 24.279 0.62 39.91 ? C4 UHM 405 A 1 HETATM 3 C C5 UHM . . . F 3 6.934 -0.198 20.128 0.62 38.38 ? C5 UHM 405 A 1 HETATM 4 C C6 UHM . . . F 3 6.946 -0.418 18.748 0.62 38.17 ? C6 UHM 405 A 1 HETATM 5 C C7 UHM . . . F 3 6.261 0.433 17.896 0.62 38.04 ? C7 UHM 405 A 1 HETATM 6 C C8 UHM . . . F 3 5.548 1.498 18.402 0.62 38.3 ? C8 UHM 405 A 1 HETATM 7 C C10 UHM . . . F 3 6.298 0.954 20.61 0.62 38.65 ? C10 UHM 405 A 1 HETATM 8 N N2 UHM . . . F 3 8.008 4.398 22.524 0.62 39.14 ? N2 UHM 405 A 1 HETATM 9 C C12 UHM . . . F 3 7.901 3.266 22.415 0.62 39.21 ? C12 UHM 405 A 1 HETATM 10 C C11 UHM . . . F 3 7.827 1.801 22.273 0.62 39.09 ? C11 UHM 405 A 1 HETATM 11 O O1 UHM . . . F 3 6.53 1.283 21.924 0.62 39.16 ? O1 UHM 405 A 1 HETATM 12 C C9 UHM . . . F 3 5.567 1.773 19.761 0.62 38.42 ? C9 UHM 405 A 1 HETATM 13 C C UHM . . . F 3 7.427 -1.339 20.967 0.62 38.2 ? C UHM 405 A 1 HETATM 14 O O UHM . . . F 3 6.698 -2.301 21.197 0.62 37.56 ? O UHM 405 A 1 HETATM 15 N N UHM . . . F 3 8.668 -1.252 21.454 0.62 38.69 ? N UHM 405 A 1 HETATM 16 C C1 UHM . . . F 3 9.125 -2.131 22.509 0.62 38.98 ? C1 UHM 405 A 1 HETATM 17 C C2 UHM . . . F 3 10.498 -1.791 22.982 0.62 39.49 ? C2 UHM 405 A 1 HETATM 18 S S UHM . . . F 3 12.551 -1.336 24.346 0.62 40.4 ? S UHM 405 A 1 HETATM 19 C C3 UHM . . . F 3 11.581 -1.601 22.106 0.62 39.67 ? C3 UHM 405 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 19 #